Basic Information

Insect: Meloe dianella
Gene Symbol: -
Assembly: GCA_028455855.1
Location: JAPTHL010000019.1:192189-193887[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0089 0.54 10.4 2.2 1 23 60 82 60 82 0.98

2 16 0.0028 0.17 12.0 2.5 2 23 88 109 88 109 0.98

3 16 0.02 1.2 9.3 9.6 1 21 115 135 115 137 0.96

4 16 4.1e-05 0.0025 17.8 3.5 1 20 143 162 143 165 0.97

5 16 1.2 71 3.8 7.9 1 23 173 195 173 195 0.97

6 16 0.00035 0.021 14.9 0.4 2 23 202 223 201 223 0.97

7 16 0.0033 0.2 11.8 0.8 1 23 228 251 228 251 0.97

8 16 3.6e-05 0.0022 18.0 0.4 2 23 255 276 255 276 0.97

9 16 4.4e-05 0.0027 17.7 1.3 3 23 283 304 281 304 0.95

10 16 3.6e-06 0.00022 21.1 4.3 1 23 311 333 311 333 0.98

11 16 9.2e-07 5.5e-05 23.0 1.6 1 23 337 359 337 359 0.98

12 16 3.4e-06 0.00021 21.2 6.6 1 23 365 387 365 387 0.98

13 16 0.00079 0.048 13.8 4.8 1 23 393 415 393 415 0.96

14 16 1.1e-05 0.00068 19.6 2.6 1 23 421 443 421 443 0.99

15 16 0.0042 0.26 11.5 5.4 1 19 449 467 449 470 0.94

16 16 0.0084 0.51 10.5 4.5 1 23 485 508 485 508 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0089	0.54	10.4	2.2	1	23	60	82	60	82	0.98
2	16	0.0028	0.17	12.0	2.5	2	23	88	109	88	109	0.98
3	16	0.02	1.2	9.3	9.6	1	21	115	135	115	137	0.96
4	16	4.1e-05	0.0025	17.8	3.5	1	20	143	162	143	165	0.97
5	16	1.2	71	3.8	7.9	1	23	173	195	173	195	0.97
6	16	0.00035	0.021	14.9	0.4	2	23	202	223	201	223	0.97
7	16	0.0033	0.2	11.8	0.8	1	23	228	251	228	251	0.97
8	16	3.6e-05	0.0022	18.0	0.4	2	23	255	276	255	276	0.97
9	16	4.4e-05	0.0027	17.7	1.3	3	23	283	304	281	304	0.95
10	16	3.6e-06	0.00022	21.1	4.3	1	23	311	333	311	333	0.98
11	16	9.2e-07	5.5e-05	23.0	1.6	1	23	337	359	337	359	0.98
12	16	3.4e-06	0.00021	21.2	6.6	1	23	365	387	365	387	0.98
13	16	0.00079	0.048	13.8	4.8	1	23	393	415	393	415	0.96
14	16	1.1e-05	0.00068	19.6	2.6	1	23	421	443	421	443	0.99
15	16	0.0042	0.26	11.5	5.4	1	19	449	467	449	470	0.94
16	16	0.0084	0.51	10.5	4.5	1	23	485	508	485	508	0.95

Sequence Information

Coding Sequence: ATGGCAAATTTAAACGAAATCAATATAAAATCGGAAATAAAACAAGAAACTTATGAGATAATTGATGAGAATCCTGAAATTTATTATAAAATTGAAACAAATATCAATGAGAATTACGATGATGATTTAAGGGATGATGAATTAGAATTAACAAAATTTGAAAATGATACAACAGTGTATCGTTGTAATTTATGTGATGAGATTTATCAAAATTTCTTCGATTATAAAATCCATAGGAAACAACATTTTTTAGAGAAACGCACATGTAAATTATGTAAAATTGTTTGTCAATCAATTAGTAAGTTACAAGTACATATGAATACACATTTAGGTATAAAACCATATAAATGTAATGAATGCAATAAATGTTTTGTATGTAATAATCAATTACGATTGCATATGCGTTGTCATTCAACTGAACAAAAATACAAGTGCAACAAATGTAATAAAGCATTCCGTTATTTAGGATCATTAAGAAGTCATATGGTGTGTCATAATAATGTTAAATTACAAGAATTTAAATGTCAGGATTGTGGACATATGTCATCAACATTACAAAGCCACCATAAACACTTAAAATCACATGGTAGAAAGATCGTAATTAAATGTGAATTATGTGATGCAACATTCCGTAGTGATCGTGTATTACAAAATCATTTAAATACACATAAAGAATTAAAATTTCCATGTGAATATTGTAAAGGTATTTATCAATCATTATATCGTTTAAAACGACATATAAAACGTGCCCATATACCAAATGTATGTGATGAATGCAATGAAATCTTTTATGATCGTTCCTTATATACCAAACATATAAAACAACATAATATCAAACAATCAATATGTCAATATTGCAATAAGAAATTTGATAAATTGAAAAATTTAAGTGAACATATACGTTTACAACATAAAAACGATGGTAATTCACATGAATGTCATCTATGCCAAAAGAAATTCATAAATTCATCATTATTACGTAATCATATTAAAATACATGATAAATGTTTCAAATGTCAATATTGTGAGAAATATTTCAGTTCACGTTACAATTTAGAAATACATATTGTTACACATACAGGTGAAAAGAACCATAAATGTTCAATATGTGATAAATGTTATACAACAAAAACAAGTTTAAAAAATCATCAAGCAACACATACAGATATTAGAAATTTTCAATGTGATCAATGTAAAAAAACATTTAAAACCAATCGCCGTTTATATGTACATAAATTTTCACATGCAATTGATGAAAAATATCAATGTAATATATGTAATGCAAAATTTCGTGTTAAACAATATTTAAAATATCATATGAATAAACATTCAAATATAAAACCATATGAATGTAAATTGTGTAATAAATTTTTTAAACATAAAAAATCATGGTTGAAACATTCAAATCATGACCAATTTAATCGAAATGAATTACGTAATAAAATTGGTGAATTTCATTGTGATTTATGTAAAATTAAATTTGATAATCGTACAAATTATTTAGAACATCAACGTTTCAAACATTCCAATGATACTAGTCAAGCGATTATTATTAAACAAGAAAATAACTCGCATTCCTAA
Protein Sequence: MANLNEINIKSEIKQETYEIIDENPEIYYKIETNINENYDDDLRDDELELTKFENDTTVYRCNLCDEIYQNFFDYKIHRKQHFLEKRTCKLCKIVCQSISKLQVHMNTHLGIKPYKCNECNKCFVCNNQLRLHMRCHSTEQKYKCNKCNKAFRYLGSLRSHMVCHNNVKLQEFKCQDCGHMSSTLQSHHKHLKSHGRKIVIKCELCDATFRSDRVLQNHLNTHKELKFPCEYCKGIYQSLYRLKRHIKRAHIPNVCDECNEIFYDRSLYTKHIKQHNIKQSICQYCNKKFDKLKNLSEHIRLQHKNDGNSHECHLCQKKFINSSLLRNHIKIHDKCFKCQYCEKYFSSRYNLEIHIVTHTGEKNHKCSICDKCYTTKTSLKNHQATHTDIRNFQCDQCKKTFKTNRRLYVHKFSHAIDEKYQCNICNAKFRVKQYLKYHMNKHSNIKPYECKLCNKFFKHKKSWLKHSNHDQFNRNELRNKIGEFHCDLCKIKFDNRTNYLEHQRFKHSNDTSQAIIIKQENNSHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00929786;
90% Identity: -
80% Identity: -