Mdia001384.1
Basic Information
- Insect
- Meloe dianella
- Gene Symbol
- bab1
- Assembly
- GCA_028455855.1
- Location
- JAPTHL010000054.1:1854346-1859820[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-12 8.5e-09 34.6 0.0 1 39 414 453 414 457 0.90 2 4 1.5e-13 2.3e-10 39.6 0.1 1 39 468 506 468 509 0.95 3 4 2.5e-19 3.8e-16 58.1 0.0 1 45 523 568 523 568 0.98 4 4 7.2e-17 1.1e-13 50.3 0.0 1 39 575 614 575 618 0.94
Sequence Information
- Coding Sequence
- ATGTCTGGccaacattactgtctacgatggaacaattaccaaagtaatatgacatcagtgtttcatcaactattacagaatgaagctttcgttgatgtaacattagcatgtaatgacttatcattaaaagcacacaaaGTAGTACTATCGGCGTGTTCAGCATATTTTCAAAAATTATTGTTAgaaaatccatgtaaacatccaacaataataatgccacaagatgtctgctatgctgatttaaagttcatcatagacttcgtttacaaaggagaaatcgacgtttctcagactgaattgcagTCTCTTCTTCGTACGGCCGATCAATTAAAAATCAAAGGTTTATGTGAGCCTACTGACGAAAAAGAAAATTCACCAACACCAATTCAACCTCAATTTTTTGCTAAAACGTTTTCGAGAAAGTCACCGAAACATTTAAGGACACAAGACAATAATAAGAAACGtaaacataataaaaaaaaccatattgacaataccacaacgaccacaacagcagcagcaacaacaaacaatacaacgtcagatcgagaggataatgttagtatagaaaatggtagccataatgatgaggatatcgataataatggtgacgatgatgataatgatgatgatgatggaggtgacaatgacaacagtacaacaactttaggaaccaatgaacaacaacaaaaacgtTGTAGAAAAACCAGTGACACAACAACAAAAGATCAAATAAAACCGTTAAACATGAGTAGTCATGGAATTATGACAGGCCAGATAATTTTCTCCCAGTTTGGAGTCGATACAGATGACTTTCCACCTGAACCGCCAGCACCTTCAGCAATACCAGTTGGACATGTTGATATGCAAGAACATTCACCAACACGTACATTATTAACAAATACAATACATAGGACTGATCTATCGGATTCCAACAATAAATTCTGCGATGTCAAAAAAGAAGTAGATGTAAAATTTGAAACTTTACGATCATCTTATGATCAAGATTCATTATTAGAAATGGATTCACATATGTCAGGGCCTGATCATTCGATGGATAGTCATGATGATGAACAGAGTATGCATCAAATGATGGTCACACCAGAACTGATGGGCATTATCCCCGGTGTCTCTAATAGATTAGATATAAGTAATGAAGTACCTGGATCAAAAAATAATGGCCATACAGAAAATTCACACCATACATCCCGATCTCATGGTGGTGGCCCTAAAACATGGACTCAGGAAGACATGGATATGGCCTTAGACGCTTTACGAAATCACAATATGAGTTTAACTAAAGCGTCAGCAACTTACGGTATTCCCTCCACTACACTCTGGCAACGTGCCCATAGATTAGGTATAGATACACCAAAGAAAGAAGGTCCTACGAAATCATGGACTGAAGAAAATCTAAATAATGCTTTAGAAGCACTCAGAACTGGAACAATATCGGCTAATAAAGCTAGTAAAGCTTACGGAATTCCAAGTAGTACATTATATAAGATAGCTAGACGGGAAGGTATACGATTGGCGGCGCCTTTTAATGCAGCACCTACCACTTGGACACCTGAAGATTTAGAAAAAGCTTTAGAATCGATCAGATCAGGTCAGACGTCGGTACAAAAAGCATCAACTGAATTTGGTATTCCAACTGGTACGTTATATGGCCGATGTAAACGGGAAGGCATTGAATTGTCACGATCGAATCCGACTCCATGGTCAGAAGATGCAATGGGAGAGGCTTTAGAAGCTGTCAGATTGGGACATATGTCGATTAATCAAGCGGCCATACATTATAATCTGCCTTATTCATCATTATATGGTAGATTTAAAAGAGGCATTAAATACGATTCAGATAATATAGAACCAAATTCTGATAGTCAATCACAATTAGATGGGCATACGTTTGGTATTGAATATGCGAATACACATCAAGTTCAATATCAAAATCAAACAAATAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSAYFQKLLLENPCKHPTIIMPQDVCYADLKFIIDFVYKGEIDVSQTELQSLLRTADQLKIKGLCEPTDEKENSPTPIQPQFFAKTFSRKSPKHLRTQDNNKKRKHNKKNHIDNTTTTTTAAATTNNTTSDREDNVSIENGSHNDEDIDNNGDDDDNDDDDGGDNDNSTTTLGTNEQQQKRCRKTSDTTTKDQIKPLNMSSHGIMTGQIIFSQFGVDTDDFPPEPPAPSAIPVGHVDMQEHSPTRTLLTNTIHRTDLSDSNNKFCDVKKEVDVKFETLRSSYDQDSLLEMDSHMSGPDHSMDSHDDEQSMHQMMVTPELMGIIPGVSNRLDISNEVPGSKNNGHTENSHHTSRSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDNIEPNSDSQSQLDGHTFGIEYANTHQVQYQNQTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00841760;
- 90% Identity
- iTF_01366443;
- 80% Identity
- iTF_00987253;