Basic Information

Insect: Melitaea cinxia
Gene Symbol: stc
Assembly: GCA_905220565.1
Location: HG992219.1:14365716-14380522[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3.1e+04 -4.3 1.6 15 19 495 499 494 499 0.81

2 13 0.049 7.6e+02 1.0 1.4 2 10 527 535 527 535 0.92

3 13 3.7e-05 0.58 11.0 18.1 4 19 543 558 541 558 0.93

4 13 1.3e-07 0.002 18.9 15.9 1 19 594 612 594 612 0.98

5 13 5.5e-05 0.85 10.5 13.6 1 19 653 671 653 671 0.99

6 13 3.8e-05 0.6 11.0 11.9 1 19 712 734 712 734 0.88

7 13 2 3.1e+04 -4.8 1.7 6 10 764 768 764 768 0.95

8 13 0.015 2.4e+02 2.7 7.3 1 11 774 784 774 785 0.93

9 13 0.043 6.7e+02 1.2 0.3 4 10 789 795 788 796 0.93

10 13 3.7e-06 0.058 14.2 14.0 3 19 803 819 801 819 0.92

11 13 0.018 2.7e+02 2.5 17.5 1 18 858 874 858 875 0.89

12 13 4.4e-08 0.00069 20.4 14.0 1 17 911 929 911 935 0.83

13 13 0.0046 73 4.3 14.4 1 19 941 958 941 964 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3.1e+04	-4.3	1.6	15	19	495	499	494	499	0.81
2	13	0.049	7.6e+02	1.0	1.4	2	10	527	535	527	535	0.92
3	13	3.7e-05	0.58	11.0	18.1	4	19	543	558	541	558	0.93
4	13	1.3e-07	0.002	18.9	15.9	1	19	594	612	594	612	0.98
5	13	5.5e-05	0.85	10.5	13.6	1	19	653	671	653	671	0.99
6	13	3.8e-05	0.6	11.0	11.9	1	19	712	734	712	734	0.88
7	13	2	3.1e+04	-4.8	1.7	6	10	764	768	764	768	0.95
8	13	0.015	2.4e+02	2.7	7.3	1	11	774	784	774	785	0.93
9	13	0.043	6.7e+02	1.2	0.3	4	10	789	795	788	796	0.93
10	13	3.7e-06	0.058	14.2	14.0	3	19	803	819	801	819	0.92
11	13	0.018	2.7e+02	2.5	17.5	1	18	858	874	858	875	0.89
12	13	4.4e-08	0.00069	20.4	14.0	1	17	911	929	911	935	0.83
13	13	0.0046	73	4.3	14.4	1	19	941	958	941	964	0.75

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAACCCTTTCTCTTACAACCAATATCCAAATACTCCAAATACTTGGAACGGCACTTATAACAACCAATATCAACCTTATTATCCAAACCCAAATCAAAGTAGACAATATGACCCTACTAACCAATACGTTAGTTTTGATGAGTTTTTATCCCAAATGCAAATTTCCAATACTCCTCCTGCCAATGCTGCTAACTACAATAATATGCAATATCAAAATTATCAAAGTGCTCAATATAACAATGTTCCCAATTATCAAAATGGGTCAACACCGCAATGCTCTCAAGCAGAGTATTCGTACGGATCGAACACTGCCAATTTTCCTAATAATGAAGAATCTTATCAATCTAATGTACATAATCAATATAATCAACTGAGTTCAGACCAAAATAATTATACAAATGAGATGGTCTTTAAATCTAAGCTAACACCAACTGCTACTGAATTCGTACCTAAAAGTTCTAAATCAAAATCTCCTGTTATCCCCCACGATGAACCCCCAGAAGGATCAGATTCATCAGTAAATACATCAGGCAAATCTTCTACCAATTATTCTAAGCCATCCAGTTCAACTAACTGGAGAGAAAAGCCGCATAGTTCACAGGGTAGTAGTTCAACTAGTAATGATACAAGTCAGATGCAAAGATCCTCTTTTAAATGTCAAGAGCCAAATAGAAAAAATAAAGATGAGTCCAAACCACATAATCAAGACAGTTATAATGACTACTCTGAGTCACTAGACCAAAACACTACTAAAAACAATAAAGATTCCTCAAACCGTCCCAATGAAGTGAATAATAGGAACCGCAATCGTGCTAAAAACCGATCCTCTACCAATAATCAAACCCAGGAATCTAGCTACCGCAATCAAGACTATAATAACCAAGACTCTAGTAGTCGTAGATCTTACAATCGAAACAGTGATTTAAATAGCTTTAATCATGACACAAATTCTTGTAATGGTGAAACAAGCAATCATTTGCACAACGAAGGGGGCCAATCGAAATACAACTCTAAGGCTAAAAACAGAGAGTCTGATGCAGGTCGAACTTTTTACAACAGTCATATATCCAAAGAAAGTCAAGATGTTAGAAATGGAAGGAACGACGGAACTAGAAATAGGAAATGGGCTGGCAGTCAAAGATTAAGAGCAGCAGAACGAAACATTACAGAAGATGAACATTACGCTAACTCATATTTGAATTATAGGGATGAGAAAGCAAAAGATAATGTGCAAAGTCCAATGAGGGGAAAAAATAAACCTCAATCAAATGTAGGAGAAAATACTGAAATGACTCAACGAGAACGCCTTAGTGAACAACTTGATAAGGGAACTCTTGAATGCCTCGTGTGTTGTGAAAGAGTGAAGCAAACTGACTCTGTGTGGTACTGCAGCAACTGTTACCATGTGTTGCATCTGCGCTGTATACGAAAGTGGGCTATAAGCAGTATGGTCGAAGGGAAATGGCGTTGTCCAGCTTGTCAGAACACCAGTCAAGATATACCAACTGAGTACAGATGCATGTGTGGGGCAATAAGGAATCCAGAGTATCAGAGGGGGTCGACCGGCGCCCACACTTGTGGCAAAGCTTGCAAGAGACTAAGGAGCTGTCCGCACCCATGCACATTGTTATGTCATCCTGGCCCTTGTCCACCCTGCCAAGCCACTGTTATGAAGCAATGCGGTTGTGGAACAGAAACCCGCTCAGTTATGTGCAGCAGCAAGCTGGAGCAAGTCTGCGGGCGGCAGTGCAGTCGTAAGCTCGAGTGTGGAGTACACTCTTGCACAAAAGATTGCCACGAAGGTCCCTGCGGTCCTTGCAAGGAAGTCGTCACACAAGTGTGCTACTGCCCAGCGGCCCGGTCGCGTTCAGTGGCGTGCACGGCGGAGTCAGGGACGGCAGAGAGGTGGTCGTGTGCGGCGGAGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCCTGCGCGCCCTGCCCGCTGCGCCCCGACAACGTGCCCGCCTGCCCCTGCGGGAACACCAGAATAAGCAAAGATCAACGTAAAACATGCACAGACCCAATACCTCTCTGTGGCAACATTTGCGCCAAGCCACTGCCTTGTGGTCCGCCCGGAGACAAGCATTTTTGCAAAGAGAATTGTCATGAAGGAGCGTGTCGCGTGTGCCCGGACACGACGCTGTTGCAGTGCCGCTGCGGACACTCCAGCCGTGAAGTGCCGTGCGCGGACCTGCCCGACATGCTGAACAACGTACTGTGTCAAAGGAAGTGTAACAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCACGGCGTGCTGCGCCGCGCAGTCGCACCGCTGCGCCGTGGTGTGCGGCCGCACGCTGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCCACTGTCAGTTTCTCGGAGCTGCGCTGCGCGTGCGGCGCGGAGGTGCTGCTGCCGCCCGTGCGCTGCGGCAGCCGCCCGCCCGCCTGCGCCGCGCCCTGCCGCCGCGCGCGCGCCTGCGGCCACGAGCCGCACCACGCCTGCCACCCCGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGAGGTGCTACGGCGACCACGAGGAACGTAAAACTATCCCTTGTTCGCAAGAGGAGTTTTCGTGCGGTCTTCCCTGCGGCAAGCCTCTACCTTGCGGCAAACACACTTGTATAAAAACATGCCACAAGGGACCCTGCGATGCTGGCAAATGCACGCAGCCGTGCACGGAGAAGCGCCCGAGCTGCGGGCACCCGTGCGCGGCGCCGTGCCATAGCGGCAGCGGTGGGGCGTGCCCCAGTGGGGCCCCGTGCCGCCGCCCCGTCGTGGCCACGTGCCCTTGCGGTCGCCGCAGTGCTGAGCGCACCTGCGCGGACAATGCGAGGGACTATGCCAAAATGATGAGCACATTGGCCGCGTCTAAGATCCAGGAAGGTGGTTCAGTCGATTTATCTGAAGTACAGCGTCCTGGAGCTATGCTTAAAACGCTGGAGTGCGACGAAGAGTGCTATGTGGAAGCTCGCAGCCGGCGGCTGGCACTGGCGCTGCAGCTGCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCCGCGCGCGAGCCCGCCTTCGCGCAGCACGTGCACGACCGCCTCACCGACCTCGTGCAGCTCGCCAAGAAGTCTAAGCAGAAGACCCGTGCCCACTCGTTCCCATCGATGAACCGACAGAAGCGTCAGTTTATTCACGAAATGTGCGAACATTTTGGCTGTGAGAGCGTCGCGTATGACGCTGAACCGAACAGGAACGTTGTGGCTACAGCCGATAAAGAGAAGTCGTGGCTGCCGGCCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCTGCGCGCGCCCGCCGCGCCCGCGCCCGCGCCGCGCGCCGCGCCGCCCGCGCCTCCCGCCAAATCATCGGGTGGCTGGGCGACGCTAACATCAACAAATGCGTGGGCAGCCCGCAGCCAGCCCAAACAGGCGCCCAAGATCGACTACTTCGACAACCCACCCGATAACTGA
Protein Sequence: MSQWNNPFSYNQYPNTPNTWNGTYNNQYQPYYPNPNQSRQYDPTNQYVSFDEFLSQMQISNTPPANAANYNNMQYQNYQSAQYNNVPNYQNGSTPQCSQAEYSYGSNTANFPNNEESYQSNVHNQYNQLSSDQNNYTNEMVFKSKLTPTATEFVPKSSKSKSPVIPHDEPPEGSDSSVNTSGKSSTNYSKPSSSTNWREKPHSSQGSSSTSNDTSQMQRSSFKCQEPNRKNKDESKPHNQDSYNDYSESLDQNTTKNNKDSSNRPNEVNNRNRNRAKNRSSTNNQTQESSYRNQDYNNQDSSSRRSYNRNSDLNSFNHDTNSCNGETSNHLHNEGGQSKYNSKAKNRESDAGRTFYNSHISKESQDVRNGRNDGTRNRKWAGSQRLRAAERNITEDEHYANSYLNYRDEKAKDNVQSPMRGKNKPQSNVGENTEMTQRERLSEQLDKGTLECLVCCERVKQTDSVWYCSNCYHVLHLRCIRKWAISSMVEGKWRCPACQNTSQDIPTEYRCMCGAIRNPEYQRGSTGAHTCGKACKRLRSCPHPCTLLCHPGPCPPCQATVMKQCGCGTETRSVMCSSKLEQVCGRQCSRKLECGVHSCTKDCHEGPCGPCKEVVTQVCYCPAARSRSVACTAESGTAERWSCAAECGRVLACGAHVCRAPCHAPPCAPCPLRPDNVPACPCGNTRISKDQRKTCTDPIPLCGNICAKPLPCGPPGDKHFCKENCHEGACRVCPDTTLLQCRCGHSSREVPCADLPDMLNNVLCQRKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPTVSFSELRCACGAEVLLPPVRCGSRPPACAAPCRRARACGHEPHHACHPGDCPPCVVLTTKRCYGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDAGKCTQPCTEKRPSCGHPCAAPCHSGSGGACPSGAPCRRPVVATCPCGRRSAERTCADNARDYAKMMSTLAASKIQEGGSVDLSEVQRPGAMLKTLECDEECYVEARSRRLALALQLRNPDVSAKLAPRYSEHVRATAAREPAFAQHVHDRLTDLVQLAKKSKQKTRAHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAPAPAPRAAPPAPPAKSSGGWATLTSTNAWAARSQPKQAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00696189;
90% Identity: -
80% Identity: -