Basic Information

Insect: Euphydryas editha
Gene Symbol: stc
Assembly: GCA_036937285.1
Location: JAUPFZ010000008.1:17472751-17497759[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 4.7e+04 -4.3 1.6 15 19 487 491 486 491 0.81

2 14 0.049 1.1e+03 1.0 1.4 2 10 519 527 519 527 0.92

3 14 3.7e-05 0.86 11.0 18.1 4 19 535 550 533 550 0.93

4 14 1.6e-07 0.0037 18.6 15.8 1 18 586 603 586 604 0.97

5 14 0.94 2.2e+04 -3.1 0.3 8 11 609 612 608 612 0.86

6 14 5.4e-05 1.3 10.5 13.6 1 19 645 663 645 663 0.99

7 14 3.8e-05 0.89 11.0 11.9 1 19 704 726 704 726 0.88

8 14 2 4.7e+04 -4.7 1.7 6 10 756 760 756 760 0.95

9 14 0.011 2.5e+02 3.1 7.2 1 12 766 777 766 777 0.93

10 14 0.042 9.9e+02 1.2 0.3 4 10 781 787 780 788 0.93

11 14 3.7e-06 0.086 14.2 14.0 3 19 795 811 793 811 0.92

12 14 0.01 2.4e+02 3.2 15.8 1 18 850 866 850 867 0.85

13 14 3.8e-08 0.00089 20.6 14.0 1 17 903 921 903 927 0.83

14 14 0.01 2.3e+02 3.2 12.8 1 19 933 950 933 956 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	4.7e+04	-4.3	1.6	15	19	487	491	486	491	0.81
2	14	0.049	1.1e+03	1.0	1.4	2	10	519	527	519	527	0.92
3	14	3.7e-05	0.86	11.0	18.1	4	19	535	550	533	550	0.93
4	14	1.6e-07	0.0037	18.6	15.8	1	18	586	603	586	604	0.97
5	14	0.94	2.2e+04	-3.1	0.3	8	11	609	612	608	612	0.86
6	14	5.4e-05	1.3	10.5	13.6	1	19	645	663	645	663	0.99
7	14	3.8e-05	0.89	11.0	11.9	1	19	704	726	704	726	0.88
8	14	2	4.7e+04	-4.7	1.7	6	10	756	760	756	760	0.95
9	14	0.011	2.5e+02	3.1	7.2	1	12	766	777	766	777	0.93
10	14	0.042	9.9e+02	1.2	0.3	4	10	781	787	780	788	0.93
11	14	3.7e-06	0.086	14.2	14.0	3	19	795	811	793	811	0.92
12	14	0.01	2.4e+02	3.2	15.8	1	18	850	866	850	867	0.85
13	14	3.8e-08	0.00089	20.6	14.0	1	17	903	921	903	927	0.83
14	14	0.01	2.3e+02	3.2	12.8	1	19	933	950	933	956	0.72

Sequence Information

Coding Sequence: atgtcTCAGTGGAGTAATTCTTACTCTTATAACCAGTATCCAAATACTCCAAATACTTGGAACGGGAATTTTAACAACCAATATCAAGGTTATTATCCTAATCCAAACCCAAATAGGCAATATGACCCAACTAACCAGTATGTTAGTTTTGATGAATTTTTATCTCAAATGCAAATTTCAAACGGTCCTCCTACGAATGCtgctaattataataatatgcaatatcaaaattatcaaaGTGGTCAATACAACAATATACCCAGTTATCAAAATGGGTCTACACCGCAATGCTCACAGCCAGCGTATGCGTATGGATCGAACACTGCCAATTTTCCTAATAATGAGGAATCTTATCAATTAAATGTACATAATCAATATAACTCAGTGACTTTAGAacaaaataattacacaaaTGAGATGGTCTTTAAATCTAAGCTAACACCAACAGCTACTGAATTTGTGCCTAAAAGCTCTAAATCGAAATCACCCAAAAACACTCAAGATGAACCTCCAGAAGATTCAGGTTCATCAGCAAATTCAAAACCATGTAGCTCAACTAACTGGAGAGAAAAACCACATAGTTCACAACAGAGTGGTAGTTCATCTAGTAGTGATACAACAAGTCAGATGCAAAAGTCGTCTAAATATCAAGACCCAAATAGAAAAAACAAAGACGAGTCCAAATCACGTAATCAAGACTCTTATAATGACCACCTAGAACCACTAGAACAAAACTCAACTAAAAACTATAGAGACTCCTCAAACCGTCCCAGTGAAGTGAATAACAGGAACCGTAATCGCACTAAAAACCGTTCCAATAACAGTAATCAAACTCAGGATACTAGCTACCGCAGTCAAGATTATAATCACCAAGACTCAGGTACTCGTAGATCTTACAACCGTAACAGTGATTTAAATAGCTTTAATGACACAAACATTTATAATGATGATCTAAGCAATCATTTGCACAATGAAGGGGGCCAATCAAAATACAACTCTAAGGCTAAAAACAGAGAGTCTGATGTAGGTCGCACTTTTTACAACAGTACTATGTCCAAAGAAAGTCAAGATGTTAGAAATGGAAGGAGTGATGGATCGAGAAATAGGAAATGGGCTGGTAGTCAACGATTAAGAGCAGCAGAGCGCAATAGTACGGAAGATGAACAATATGCCAAcacatatttacattatagggatgagaaaataaaagataatgtGTCTAGCCCAATGAGAGGAAAAAACAAACCTTTATCAAATATTGAAGCAACAAATACAGAAATGACTCAACGAGAACGCCTTAGTGAGCAACTTGATAAAGGAACTCTTGAGTGCCTTGTGTGCTGTGAAAGAGTGAAGCAAACTGACTCCGTATGGTACTGCAGCAACTGTTACCATGTGTTACATCTGCGATGCATACGAAAGTGGGCTATGAGCAGTATGGTTGAAGGGAAATGGCGCTGTCCAGCATGTCAGAACACAAGTCAAGATATACCAACTGACTATAGATGCATGTGTGGTGCGGTACGGAACCCAGAGTATCAGAGGGGGTCGAGTGGGGCCCACACTTGTGGCAAAGCATGTAAAAGGCCGAGGACCTGTCCACACCCATGCACATTATTATGTCATCCTGGCCCTTGTCCGCCCTGCCAAGCCACTGTTATGAAGAAATGTGGCTGTGGTACGGAGACCCGTTCAGTTATGTGCAGCAGCAAACTAGCCCAAGTTTGTGGTCGACAATGTAATCGTAATCTCGAATGTGGAGTACACTCTTGCACAAAGGATTGCCACGAAGGTCCCTGCGGTCCTTGCGAAAAGGTCGTCACACaagTGTGCCACTGCCCGGCGGCGAAGACCCGCTCGGTGGCGTGCACGGCGGAGTCGGGCTCGTGCGCGTCGTGGTCGTGCGCGGCGGCGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCCTGCGCGCCCTGCCCGCTGCGCCCCGACAACGTGCCCGCCTGCCCCTGCGGAAACACCAGAATAAGCAAAGATCAGCGTAAATCATGCACAGATCCGATACCTCTCTGTGGTAATATCTGCGCTAAGCCGCTGCCCTGTGGTCCACCCGGAGACAAGCATTTCTGTAAAGAGAATTGTCATGAAGGTGCTTGCCGCGTGTGCCCCGACACGACCCTGCTGCAGTGTCGCTGCGGACACTCCAGCCGCGAGGTGCCGTGTGCGGACCTGCCGGACATGCTCAACAATGTTCTGTGCCAAAGGAAATGTAATAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCACGGCGTGCTGCGACGCGCAGTCGCACCGCTGCGCCGTGGTATGCGGCCGCACACTCTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGACACTGCGCGCCCTGCCCCCGAGTCAGTTTCTCGGAGCTGCGCTGCGAGTGCGGCGCGGAGGTGGTGCTGCCGCCCGTGCGCTGCGGCACCAAGCCGCCCGCCTGCAGCGCGCCgtgccgccgcgcgcgcgcctgcGGCCACGCGCCGCACCACTCGTGCCACTCGGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGAGCTGCCACGGCAAGCACGAGgAACGTAAAACCATCCCATGTTCGCAAGAGGAATTTTCATGCGGTCTGCCCTGCGGCAAGCCTTTACCTTGTGGTAAACACACTTGTATAAAAACATGCCACAAGGGACCCTGCGATACTGGCAAATGCACGCAGCCATGCACGGAGAAGCGACCGAGCTGCGGGCACCCGTGCGCGGCGGCGTGCCACGCGGGCAGCGGCGGCGCGTGCCCCAGCGGCGCGCCGTGCCGCCGCCCCGTCGTGGCCACGTGCCCCTGCGGCCGCCGGCACGCCGAGCGCTCCTGTTGCGACAACGCGAGGGACTATGCAAAGATGATGAGCACTTTGGCCGCATCCAAGATGCAAGAAGGCGGCTCCGTCGATTTATCTGAAGTGCAACGTCCCGGAGGAATGCTTAAAACGCTGGAGTGCGACGAGGAGTGCTACGTGGAGGCACGCAGCCGCCGGCTGGCGCTGGCACTGCAGCTACGCAACCCCGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACGGCAGCGCGCGAGCCCGCCTTCGCGCAGCACGTGCACGACCGCCTCACCGACCTCGTGCAGCTCGCCAAGAAGTCCAAACAGAAGACCCGTGCACACTCATTCCCATCCATGAACCGCCAGAAGCGTCAGTTCATACACGAAATGTGCGAACACTTCGGCTGCGAGAGCGTCGCGTACGACGCTGAACCAAATAGGAACGTTGTGGCTACGGCCGATAAGGAGaagTCGTGGCTGCCGGCCATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCtgcgcgcgcccgccgccgcccccgcgcccgcgcccgccccCGCGCCCGCTGCCGCCGCCGCCAAACCATCGGGTGGCTGGGCGACGCTGACGTCGACAAACGCTTGGGCGGCCCGCAGTCAGCCCAAGCAGGCGCCTAAGATCGACTACTTCGACAACCCTCCCGACAACTGA
Protein Sequence: MSQWSNSYSYNQYPNTPNTWNGNFNNQYQGYYPNPNPNRQYDPTNQYVSFDEFLSQMQISNGPPTNAANYNNMQYQNYQSGQYNNIPSYQNGSTPQCSQPAYAYGSNTANFPNNEESYQLNVHNQYNSVTLEQNNYTNEMVFKSKLTPTATEFVPKSSKSKSPKNTQDEPPEDSGSSANSKPCSSTNWREKPHSSQQSGSSSSSDTTSQMQKSSKYQDPNRKNKDESKSRNQDSYNDHLEPLEQNSTKNYRDSSNRPSEVNNRNRNRTKNRSNNSNQTQDTSYRSQDYNHQDSGTRRSYNRNSDLNSFNDTNIYNDDLSNHLHNEGGQSKYNSKAKNRESDVGRTFYNSTMSKESQDVRNGRSDGSRNRKWAGSQRLRAAERNSTEDEQYANTYLHYRDEKIKDNVSSPMRGKNKPLSNIEATNTEMTQRERLSEQLDKGTLECLVCCERVKQTDSVWYCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTSQDIPTDYRCMCGAVRNPEYQRGSSGAHTCGKACKRPRTCPHPCTLLCHPGPCPPCQATVMKKCGCGTETRSVMCSSKLAQVCGRQCNRNLECGVHSCTKDCHEGPCGPCEKVVTQVCHCPAAKTRSVACTAESGSCASWSCAAACGRVLACGAHVCRAPCHAPPCAPCPLRPDNVPACPCGNTRISKDQRKSCTDPIPLCGNICAKPLPCGPPGDKHFCKENCHEGACRVCPDTTLLQCRCGHSSREVPCADLPDMLNNVLCQRKCNKKLSCGRHRCRTACCDAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFSELRCECGAEVVLPPVRCGTKPPACSAPCRRARACGHAPHHSCHSGDCPPCVVLTTKSCHGKHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHPCAAACHAGSGGACPSGAPCRRPVVATCPCGRRHAERSCCDNARDYAKMMSTLAASKMQEGGSVDLSEVQRPGGMLKTLECDEECYVEARSRRLALALQLRNPDVSAKLAPRYSEHVRATAAREPAFAQHVHDRLTDLVQLAKKSKQKTRAHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAAPAPAPAPAPAAAAAKPSGGWATLTSTNAWAARSQPKQAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00985672; iTF_00825259;
90% Identity: -
80% Identity: -