Mcix015575.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melitaea cinxia
Gene Symbol
Hr39
Assembly
GCA_905220565.1
Location
HG992211.1:17051236-17064432[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.26 4e+03 -2.4 4.2 76 160 98 206 55 237 0.51
2 4 2 3.1e+04 -8.6 11.3 97 160 220 304 123 350 0.49
3 4 5.6e-08 0.00087 19.6 0.1 1 20 439 458 439 474 0.91
4 4 5.7e-65 8.9e-61 207.3 0.0 155 408 495 757 474 757 0.84

Sequence Information

Coding Sequence
ATGAACACCGCGATGTCTAGCGAAGAAGCAGTGAAGGTGGAGGGGGGGCATGTCTCCGTCACAACTATCAGCATGTCCGGTCCAGAAACAAGCAACGGTCAGTTTTCATATAGCTCCAGCGGTGTACGTATCAGCGTGTCTTCAGAACCTCACGACGAGGACTCCACTGACGCTGAAATTTCCAAAATAGACTTCACACAACATCAGTATGAGGTAAACATGAGAAACAAAAAGAAACGTTCGTCAAGTGGGCAGTACGAGAATGCAGAACAAGAAAGGCCTATGTCTTGGGAGGGTGAACTGTCCGACTCCGAAATGGTTATCGATACTAGTGTCAACAATGATGAAAATAGCAGCTCCCTTGATCTGCAGTCCTCACGGGATTCCATTGACACTCTCCGTAACGTGACAATTAAGACTGAACCACTGAAAACGGAATCGTTCCAAAGTTTGGACGACCAACGAGTTTTGGATCTTAAATATTCTGTTCCCCTGCAATCACATCAGCGGAGTCTCAGTATGAATAGGATATCGGTGCTAACGGATAACGCGTCAATGTCTCTTCCGAGGCGGCCATCATCGCCGCAAAGCAGTGCTAAGTCAACTTTATCCGACCAGTACGACACGTCGCCGCTTATACAGAATCCCGCCGTAGAAGTTCAGAACTTGACTATTAAGAAGGAAACCCAATTATCCGAGTTAAAATGCGAGCCGACAGTAGGTATGGACAAGTTGCTTGGGCTCCACGGATCACCTCTTCTAGGAAGACTGCCTAGAGTACAATCTAGTGCCAGTACAGATTCCGCCGTACATTCTATGTACACGCATAGCGTATACAGTAGCCCATCAGCCAGCCCCCGTCCTTCTCGTCATTACACGCCGTCTCTTTCACGTAATAACAGCGACGCCTCACACTCCTCCTGCTACTCCTATAGCTCAGAGTTCTCGCCCACCCATTCACCAGTTCAGGGTCGTCATCCTCACGTTGTTTATCGAGAACCAACTGTCTTCCCTGCGTCGCCAGCGCACGATGAAGACACCGACACCACTGATGACCGCCTTCATCATCATCAGGGTATCAGCAGACAACAATTAATTAATAGCCCGTGTCCAATTTGCGGAGATAAGATAAGCGGTTTTCATTACGGAATATTTTCGTGCGAATCTTGCAAGGGTTTCTTTAAACGGACCGTACAAAACCGTAAGAACTACATGTGCCTCAGAGGGGGAAACTGCCCAGTTACTGTTGCCACTAGGAAGAAATGTCCCGCTTGCAGATTCGACAAGTGCTTGGGATGTGGAATGAAACTTGAAGCGATCCGCGAGGACCGCACGCGCGGCGGCCGCTCCACGTACCAGTGCTCGTACTCGCTGTCGGGCGCCGCGTCCACCGGCTCGCTGCTGTCCGCGCACGCGCCCGCCACACTGCGCCACGCCTCCAGCCTCACTTGCGTAAATGGCCCAGTGTCGTACAATAGTCGAGGAGAATCGAGCAACAGCCGACTCACTCCCGACATACCGCCATTATTACAGGAAATAATGGACGTAGAACACTTATGGCAATACAATGAGTCGGAGCTCAGTCGAATGAGTAAATCTACGGGCAGTCCGTCCGCTAATCCGTTGCTGGCAGCAAGCGGTATCACAGCCCAGAACTCTAGCGCCGACTTCCTTGCGGACTTGTGCAACATCGCTGACCATAGGCTATATAAGATCGTCAAATGGTGCAAGAGTTTGCCTCTTTTTAAGAATATCTCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCAGCACGCCGGGCGAGGTGCGCGTGGGCGGCGGCCGGGGCATCACTCTGCACCAGAGCGCCAAATATGGTCTGACGCCATGTATCGAACGAATGTTGAGTTTCACGGATCATTTGAGAAGGCTACGAGTGGACCGGTACGAGTACGTCGCGCTTAAAGTTATCGTACTACTCACTTCAGATGCGCCGGAATTGCGTGAAGCGGAGAAAGTGCGAGCGTCCCAAGAGAAAGCGCTTGCAGCGCTGCAAGCGTACACCGCGACGCACTCGCCCGATACTCCCGCCAAGTTCGGCGAACTGTTGCTTCGTATACCGGAGTTGCAGCGGACCTGTCAGTTTTTCATGCAAGTCGGAAAGGAGATGTTAAATCCAGCCAACAAAGGCAAAGACGGCGAAGGTCCAAGCTTCAATCTTCTTATGGAACTGTTGAGAGGCGATCACTGA
Protein Sequence
MNTAMSSEEAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGQYENAEQERPMSWEGELSDSEMVIDTSVNNDENSSSLDLQSSRDSIDTLRNVTIKTEPLKTESFQSLDDQRVLDLKYSVPLQSHQRSLSMNRISVLTDNASMSLPRRPSSPQSSAKSTLSDQYDTSPLIQNPAVEVQNLTIKKETQLSELKCEPTVGMDKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPSRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREPTVFPASPAHDEDTDTTDDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAPATLRHASSLTCVNGPVSYNSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELSRMSKSTGSPSANPLLAASGITAQNSSADFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTATHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKGKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985246;
90% Identity
iTF_01018623;
80% Identity
iTF_00985246;