Mcix002087.1
Basic Information
- Insect
- Melitaea cinxia
- Gene Symbol
- dsx_1
- Assembly
- GCA_905220565.1
- Location
- HG992227.1:10940884-10941576[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 9.7e+03 -2.7 0.2 3 13 42 53 40 58 0.65 2 2 8e-24 6.3e-20 71.6 11.5 2 47 92 137 91 137 0.97
Sequence Information
- Coding Sequence
- ATGTCACATCCAGAATTTCCTAGATCGAGAACACTCGCATCCTGCACACCAATAAATGCATCGCGAGGTGAGCGGGGCGGGGCGGTGCAGTCGGCAGTCAGTCGCATCGTGACCGCGCGCCGCGCTGCGTGTGCGTCTGGCTGCACCGCACACTCCGCGAACACGGACGACACCGGCGATATGGTCTCCGTGGGCGCATGGAGGCGCCGCACGCCCGACGAGTGCGAGGAGCGCTCCGAACCCGGCGCGTCCAGCTCCGGAGTCCCGCGCGCCCCTCCCAACTGTGCCCGCTGCCGCAACCACCGGCTCAAGATCGAGCTGAAGGGCCACAAGCGCTATTGCAAGTACCGATATTGTACCTGCGAAAAATGTCGCCTGACGGCTGACAGGCAGAGGGTGATGGCATTACAGACGGCGCTGAGGCGTGCCCAGGCGCAGGATGAGGCGAGGGCACGCGCTTTGGAATCAGGAATACAGCCTCCGGGGGTAGAGCTTGACCGACCGGAGCCACCCTCCGTGAAGGCGCCGAGGAGCCCTGTTGTGCCTCCACCCGCGCCGCGCTCTCTCGGCTCGGCTAGCTGTGACTCCGTGCCTGGCTCTCCAGGAGTGTCACCGTACGCACCGCCGCCACCTTCCTCTGTGCCCCCGCAACCGACTATACCACCGCTACTGCCGCCGCAACAGCCCGGTTAG
- Protein Sequence
- MSHPEFPRSRTLASCTPINASRGERGGAVQSAVSRIVTARRAACASGCTAHSANTDDTGDMVSVGAWRRRTPDECEERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEARARALESGIQPPGVELDRPEPPSVKAPRSPVVPPPAPRSLGSASCDSVPGSPGVSPYAPPPPSSVPPQPTIPPLLPPQQPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00986150;
- 90% Identity
- iTF_00986150;
- 80% Identity
- -