Mcix015584.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melitaea cinxia
Gene Symbol
PAXBP1
Assembly
GCA_905220565.1
Location
HG992211.1:3763931-3782533[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-16 2.7e-12 47.7 0.1 4 190 505 671 502 681 0.74

Sequence Information

Coding Sequence
ATGTCAATGTTTCGTAAGCCGAAGAAAATTCAAAGGCGTGTATTTTGTGCGGACGATGACGATGACGGAGACCCTGAACCACCGCCGCCGCCAATTATTAGCAATCAGACTAAAAAGGAAAAGCCTGTTAAAGTCACTAAGCTTTTAAGTTTTGCAGATGAAGAAGAAGAAGATGGAGAAGTATTCCAAGTGAAAAAATCTTCACAAAGTAAGAGGTTGGCAAAACGTAGAGAGAAAGAGAAAAAAAAGGTTCCCGATGGTGATAATGATAAATTTGACAATCATAGTGATGAGGAAAAACAACAAGAGGAGGCTGTGAAAACGAAGCCTAAGAAGAAGATTACACTCGAAGGTCTGATTCTATCCGGACGGGAGGCCCTCGCAGCCGACGCTACGGGGGATGTTTCCGATGAAAGTGGCACAGAAGAGGATAGTAGGGGTTTCCACAAGTACCGGGCTGAGTCGGTGCGCGCGGCGCTGGCCGTGGCGCCCGGTCACATTCCCGACGCGGCGCTCATCCACGCGGCACGCAAGACCCGACAGCAGGCTCGGGAGCTTGGAGACTTTGTGCCCATACAGTCGGAAGCCCCTCCAGGGTCGAGACTTGTTCGAGATGAAGATGGAGATGACGATGAAGAGGAAGGCAGGATCGTTGTCCGGGGTCTGGAACTGCCTAGTGACAAACCAAAACGTGGCACAAAAGCAGCACTCTCTGATGAAGAGATCAACAGCGAAGCAGAAGAATGGGAGGAACAGCAAATGCAGAAGGCTGTTCCTTCTATTGCTGATATAACTGGTGAAGGCATCGAGTTGAACCCGTTCGCGGTGGCGCCCCCTCCCCCGCGACTGGGCGACGCGCCCGCGCACCTGCGGCCGCTGGCGGCGCCCGGCCAGCCGCCGCCCGCCAGCGCGCACGAGCTGCTGCGGGCGCTGCAGGACAGGTTGTCGGAGCTCAGCACGGACCGCGAGGCGACGGCCGAGAAGATGGCGGTGTGTCGCGAGAAGTTGCTCTGCGCGGCGCGCACGCGGGAGTCGCGCGCCGCGCGCACTTCCGAGCTGGACGCCGCCTACCGCCGCGCGCAGGCCGCCCGCGGGTACGTCACCGACCTCGTCGAGTGCCTGGACGAGAAGATGCCGCAACTGGAGGCGCTGGAGGCGCGCGCGCTGGCGCTGCACCGGCGCCGCTGCGAGTTCCTCGTGGAGCGGCGCCGCGCTGACGTCCGCGACCAGGCGCAGGACGTGCTCGCCCTCGCAGCACGTCCCGGCGCGGCGAAGCCGGTGGACAGTGAAGAGAAGCGGCAGCGGACGGCAGAGCGCGAGGGGCGGAGGCGGGCGCGCAGGCTGCGGCGCGAAGCGGCCGGCACTGCGCACGCGCACCGCGACGGGGACTCCAGCGACGACGAACTGCCACCCGCGCTGCGGCACCACTGCGCGCAAGAGACCGAGGCGATCCGCTCGCTGTCAGCTCGCCTGTTCGCGGACGCGCTGAGCGCGTGGCGCTCGGTGCGGGGCGTGTGCGCGCGTATGGCGCGGCTTCGGCGCCGCCAGCCCGCGCTCTACGCCGACGCCTACGTGGCGCACTGCCTGCCGCGCCTGCTGGCGCCCTACGTGCGGCACGAGTTAATATTGTGGAATCCATTAGCTGATGAAGACAATGAAGACTACGAAAAAATGGACTGGTACAAATGTCTGATGATGTACGGCGTGAAGTCAGAACCTCTATCGAGCGACTCTGACCAGTCGTCGGATGAAGAGACAGAACCACCCGAGGTCACTGAGGACTCTGTCAGAGACGACCCCGACCTCATGCTGGTTCCAACTATCATTGAAAAGGTTGTGCTTCCTAAGGTCACCGAGCTGGTGGAGCACGCGTGGGACCCGATGAGCGTGCGCGCGTGCGTGCGTCTGCGGCGCGTGCTCCTGCGCGCCGCCGAGCTGCCCGGCGCCACCGGCGACCCCCCGCGCCGCCTCGCCGCCGCCGTGCGCGCGCGCCTCGCCGCCGCGCTCGCCGCCGACGTGTTCCTGCCCGCGCTGCCGCCGCAGGTGCTGGAGGGCGCGGGCGGCGCGTTCTGGAAGCGCAGCCTGGGCGGCGGCGTGCGCCTGCTGCGGGCCGCGCTGGCGCTGTGCGCGCCGCCCGCCGCGCTCGCCGCCGACGCGCTGGCGCTGGCGCTCGTGGAGACGCTGTGCTGCGCGGCGGGCGCGGCGCCGGGCCCGCAGGCGGCGGCGGCGGCGGCGGCGCTGGGCGCCACGCTGCCGCGCGCGGGCGCTCTGCGAGCTGCCGCGCTGCGCAGGCTGGCCGCGCTGGCGCGCCTGGCGCTCACCCGCCTGCACTCCGACAACCCCTTGCACTTAAAAGCGCTCGAGCAAGCAAGAGGCGTTCTAGCAGAAGCGAAGGCCGTAGAATGA
Protein Sequence
MSMFRKPKKIQRRVFCADDDDDGDPEPPPPPIISNQTKKEKPVKVTKLLSFADEEEEDGEVFQVKKSSQSKRLAKRREKEKKKVPDGDNDKFDNHSDEEKQQEEAVKTKPKKKITLEGLILSGREALAADATGDVSDESGTEEDSRGFHKYRAESVRAALAVAPGHIPDAALIHAARKTRQQARELGDFVPIQSEAPPGSRLVRDEDGDDDEEEGRIVVRGLELPSDKPKRGTKAALSDEEINSEAEEWEEQQMQKAVPSIADITGEGIELNPFAVAPPPPRLGDAPAHLRPLAAPGQPPPASAHELLRALQDRLSELSTDREATAEKMAVCREKLLCAARTRESRAARTSELDAAYRRAQAARGYVTDLVECLDEKMPQLEALEARALALHRRRCEFLVERRRADVRDQAQDVLALAARPGAAKPVDSEEKRQRTAEREGRRRARRLRREAAGTAHAHRDGDSSDDELPPALRHHCAQETEAIRSLSARLFADALSAWRSVRGVCARMARLRRRQPALYADAYVAHCLPRLLAPYVRHELILWNPLADEDNEDYEKMDWYKCLMMYGVKSEPLSSDSDQSSDEETEPPEVTEDSVRDDPDLMLVPTIIEKVVLPKVTELVEHAWDPMSVRACVRLRRVLLRAAELPGATGDPPRRLAAAVRARLAAALAADVFLPALPPQVLEGAGGAFWKRSLGGGVRLLRAALALCAPPAALAADALALALVETLCCAAGAAPGPQAAAAAAALGATLPRAGALRAAALRRLAALARLALTRLHSDNPLHLKALEQARGVLAEAKAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01080731;
90% Identity
-
80% Identity
-