Mcix016766.1
Basic Information
- Insect
- Melitaea cinxia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905220565.1
- Location
- HG992232.1:3497722-3499660[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-14 5.5e-12 46.0 0.0 1 39 61 100 61 105 0.93 2 2 2.9e-18 8.8e-16 58.1 0.0 1 43 265 308 265 310 0.95
Sequence Information
- Coding Sequence
- ATGTGGGTCGCACGACTCGCCAAAACAAATAAAAATGCAGCGATAGTCGACGGTGCATCGACCTTGCATCCTCGCTCCGAGTCGGCGACACCAAGCGATATGCCCCCCACCCGCCGAATAATAAGATTAAAACGTGCAGTCCTAGAAGGGTCAAGCAATAGCGCTACGAGACGCGCCTACACAGAGGATGAGCTACAGTCCGCGCTGCGGGACATCCAGTCCGGGCGGTTGGGGACCCGTCGTGCCGCCGTTGTGTATGGGATCCCTCGCTCCACGTTACGGAACAAGGTCAACAAGTTCGGCCTCACCACCGATACCGGCCAAGATTCCGAGCCCGATAGCGAGCCCGAGAAGCCGGAGTCACCGCCGTCGGTCATCCTCAAGATCCCAACCTTCCCGCCGCCCGACGAGAAGAGTCCCTCGCCCGCGACGCCAGTCACCACCCCGGTAACGCCCATCACTCCTATTCTTCCCACACAGCCGCCGCTCCTACTCCCACCGTCGGTCTTCGCCGACCCGCCCTCCGGCCAGCACCTCTTCACGTCCCTCAGCGACGTTATAGCGAAAAGCATCAGTCAAAAGTTTCAACAGCCCCTAGATCGACCGCCTCAGCCCTCCGACCTCCAGTTCATGCGCGCGCCAGATAGACACGTCTCCGTGATAAAAACGCCCCCCGATAACCAGAGGAACTACGCGATGCCGAGCAACTCGAAGGCGCCGCCTAACAATAACGGGCAGCCGGCGACCGGCGGGAAGGGCACGCGGCCCAAACGCGGGAAGTACCGCAATTACGACAGAGACAGTCTCGTGGAGGCCGTGAAGGCGGTGCAACGCGGAGAGATGTCCGTACACCGCGCCGGGTCCTACTACGGCGTGCCGCACTCCACGCTCGAATACAAGGTGAAGGAGCGCCACCTCATGAGGCCCAGGAAACGCGAGCCGAAGCCCCAACCGGAGGTCAAGCCGCAGCCCCCGAAGCCGCCGCCGAAGCCGGCGACGAAGCCGTTCGGGAACGGGCTCAACGGCCCCGAGGGCTACCCGGCCGGGTACCCGTTCTGGGCGGGCGGGTTCCCGCCGCCCGCGCCGGACCTGTACGCGTCGCACATGATGCGGCGCCTGCGCGAGGAGGCGCCGCCGGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCCAGCCTGGAGCGCGAGGAGCCGGCCGCGCGCCGCCCGCGCCTGGACGCCGGCCTGCGCCTGGCCGCCGACATGCGCGAGGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACGCCGCCCGCCGAGCCCGCGCCCGAGCGCGCCTAG
- Protein Sequence
- MWVARLAKTNKNAAIVDGASTLHPRSESATPSDMPPTRRIIRLKRAVLEGSSNSATRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLTTDTGQDSEPDSEPEKPESPPSVILKIPTFPPPDEKSPSPATPVTTPVTPITPILPTQPPLLLPPSVFADPPSGQHLFTSLSDVIAKSISQKFQQPLDRPPQPSDLQFMRAPDRHVSVIKTPPDNQRNYAMPSNSKAPPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPEVKPQPPKPPPKPATKPFGNGLNGPEGYPAGYPFWAGGFPPPAPDLYASHMMRRLREEAPPANGSFLEGIIRSSLEREEPAARRPRLDAGLRLAADMREAVQRLRADKLRPRNGTPTPPAEPAPERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00776665;
- 90% Identity
- -
- 80% Identity
- -