Hcyd000536.1
Basic Information
- Insect
- Heliconius cydno
- Gene Symbol
- Mblk-1
- Assembly
- GCA_036379175.1
- Location
- FAPN01104903.1:1-1312[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-15 1.2e-11 45.1 0.0 1 39 45 84 45 89 0.93 2 2 3e-19 8.8e-16 58.4 0.0 1 43 253 296 253 298 0.95
Sequence Information
- Coding Sequence
- ATGACCCTTAGCATTCTAGGTTTAAAATGTTGTCCTAAAATTTTAAGAGACGGAATGATattggattttaaatatagATTAAAACGAGCAGTCCTCGAAGGCTCTAGCAACAGTGCTACAAGACGAGCTTACACCGAAGATGAACTGCGATCTGCTCTGCAGGATATCCAATCTGGGAGGTTGGGAACTCGTCGGGCCGCCGTTGTCTACGGCATACCTCGATCCACTCTTCGCAACAAAGTCAACAAGTTTGGTCTTATGTCGGATACTGGCCAGGAATCGGATCCGGATAGTGAACCCGATAAAGCAGAATCACCACCATCCGTTATCCTCAAAATACCGACTTTCCCACCTCCAGATGAAAAAAGTCCTTCGCCAGCGACGTCCATCACTACCCCAGTTACACCCATCACTCCGCTCCTACCACCTCAGCCGCCGCTCAACCCTCCATCCCAACTTTTACTCCCACCATCAGTTTTTGCAGATCCGCCTTCCTCTCAGCACCTTTTTACATCACTGAGTGATGTCATAGCAAAAAGCATCAGCCAAAAGTTCCAACAGCCACTAGATAGACCACAACCATCAGACCTGCAGTATATGCGAGCACCCGATAGACACGTATCCGTAATTAAAACTCCTCCAGACAATCAGAGAAATTACGCGATGCCCAGCAACTCAAAAGCTACGCCTAATAACGGGCAACCGGCCGCCGGCGGAAAAGGCACTAGGCCCAAACGTGGAAAATACAGAAACTACGACAGAGATAGTTTAGTGGAAGCTGTGAAAGCGGTCCAGCGCGGTGAGATGTCTGTCCACCGTGCGGGCTCATACTACGGAGTGCCGCATTCCACACTAGAGTACAAAGTAAAGGAGCGGCATCTGATGCGGCCGCGAAAACGGGAGCCGAAACCCCAACAGGAAGTGAAGCCTCAACCTCCGAAACCTCCACCGAAACCTCCCACAAAGTTCACAAACGGGCTGAACGGGCCGGACAGCTATCCTAACTACCCGTTCTGGCCGGGAGGGTTCGCGCCGCCGGCCCCCGACCTGTACGCGTCGCACATGATGAGGCGACTGCGCGAGGAGGCGCCCCCGCCTGCCAACGGGTCTTTCCTGGAGGGCATCATCCGCTCGAGCCTGGAGCGGCCGGCCGCGCTTATGCAGCGGC
- Protein Sequence
- MTLSILGLKCCPKILRDGMILDFKYRLKRAVLEGSSNSATRRAYTEDELRSALQDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLMSDTGQESDPDSEPDKAESPPSVILKIPTFPPPDEKSPSPATSITTPVTPITPLLPPQPPLNPPSQLLLPPSVFADPPSSQHLFTSLSDVIAKSISQKFQQPLDRPQPSDLQYMRAPDRHVSVIKTPPDNQRNYAMPSNSKATPNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPPKPPTKFTNGLNGPDSYPNYPFWPGGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPAALMQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00778690; iTF_00781756; iTF_00984950;
- 90% Identity
- iTF_00781756;
- 80% Identity
- -