Maur018462.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403617.1:14023007-14036230[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0013 0.12 13.2 0.2 1 23 140 163 140 163 0.97 2 11 0.11 11 7.1 0.0 2 23 180 200 179 200 0.95 3 11 0.0056 0.52 11.2 1.1 2 23 333 353 332 353 0.97 4 11 0.00035 0.033 15.0 1.5 1 23 359 382 359 382 0.96 5 11 0.00036 0.033 15.0 0.4 1 23 442 464 442 464 0.95 6 11 9e-08 8.4e-06 26.3 1.5 3 23 477 497 475 497 0.97 7 11 5.2e-05 0.0049 17.6 3.7 2 23 505 526 504 526 0.97 8 11 4.5e-06 0.00042 21.0 0.4 2 23 532 553 531 553 0.97 9 11 0.00024 0.022 15.6 1.6 1 20 559 578 559 581 0.93 10 11 0.0022 0.2 12.5 0.4 2 23 587 608 586 608 0.91 11 11 2.9e-06 0.00027 21.6 0.3 1 23 613 636 613 636 0.98
Sequence Information
- Coding Sequence
- ATGTTTGACTCACTTCCAATATGTCGAGTGTGTTTAAAAACATCACTTGAATACATTGATTTCGACACACCATTCGAGGTGGAGGACGCCAACATTAAAACGATTGACAACGGACTCACTTATCTTGATTGTTTTCAAGCTTGTACTCGCATCGAGATCGATTTTGATGAGAATTATCCACAAAGTTTATGCAGTTCCTGTGGTCTGGAATTGAAAATTGCTTTTGAATTCCTTCAAAAGGCCGAAATTGCCGATAAGACGCTACGTGAATTATCTGCAAACACAAAAGTTGAAAAATTCGATGATGAAGATGAAGTGAAATGTTTTCTTCCACATGAATTACATCCACATAATGATGAAGAAAGCCCAAGAAAACATGAAAAACCAAACGACAGTCAATTGGAAGATGAAAAAACATATGTATGCACAGTTTGTGGGGAGCAATTCTTCTCACAGATGGTTCTGAACTTACACGTTAATCGTTTACACACAAACAATGCAACTGACGAACAAATCAACGCCACAGTAGATAAAGTTGAATGTCAGATTTGTGATGTGATTCTATCTATAGACAGTTTGGAAACCCATATGCAAATGCACGAAGATGAATCTAACTTTGAAGAAAATAATGAAGACAAAACCATTTATGAAGAAGTAGTTGTAGATGAAGCCGAAGAGGTTGAATTCGAAATGCTTGATATGACAAATGTTTCCGTAGAAGAAGAAGAACAAGATGATTTGACAAATATAAATGACTCGCAAGATGATGGAACTAACCCTGAAAATTATGAACCAGTTGATGAAGATGAGGAGGAAATAATTTCACAAGTTAAAAATGAAACAACGCGCTCCGATGCGGACGGCGAGGAGGCTGAAGACGATGTCCATGCCGAGGACGATAACGAGGCCGACGAGGATTTGGAATTCAATGTTATAGCTAAAATAATAACCGAACAAGAAAAAAAGAAACAAAGAATCAGAAAACCGAAATCCAAACAATGTGAGATTTGCTCGAAACATGTACGATTGTCTGCGTTTAATGCACATATGAACGTACATAATGGAGTCCGCCAGTTTCCGTGCGAGTACTGTTTCCAATCTTACTTTTCAAACCGTTCATTGCAAAAACATGTTCGAGCCAACCATGCAGACAGTTTGAATTCTTGCTGTTCGATATGTAAGGAAAAAGTTGAAGGCCAAGATATGAAAGCTCATATCGATGAAAAACATTCGCACATGGTGAAGTGCACGGAATGTGATCATTCATGTCCAGAGTTAAAAATGAAAGATCACAAGAAGCGGAAACATACGGAATCCAAAGACTTTCTATGCAATGTTTGCTCAAAAACATTCAGTACGCTTGGCATACTCAATGCCCATATAAAATATCACGACAAAGAATTTACCAACAGTATAAAGTCGGACGCATGTAGTATATGTGGCAAAGTATTCTCTTCGAAACACTATCTCAAATCACATATGCTCACACATCGGGAGGATCGCAAGTTGCTTAAATGTGAATATTGTGAAAAGAACTATCACACAAAAAATTCCCTTTTCAATCATATGCGAATTCATACGGGTGATACAATCAAATGCGTTATGTGTGACAAAGAATTTGGCCGTCAATACGAATTAAATGTTCACATGCGTTTTCACACAAAAGAATATCCATTCGAGTGTGAGATGTGCCAAAAAAAGTTCGCCATTAAAGGTCATCTGAGAACACACATGTGGCGTCATCAAGGTCTCAAGTTGCAGTGTGAAGAATGTGGAAAACTTTTTACATCCACTAAAGCGCTGGCAGAGCATTCCTTCTATCATTCTGAGATGCCTTATCAATGTCCGTATTGCCCAAAAGCATATCCTTCGAAACCGAAATTCAAAGTTCATTTGAAAACTGCTCACATGGTGGAATTTTCGAATGAGGAACTTCAAACTATGGTCAAATTTCCTATACCAAAACGACCTAGAAACAGGAAGTTTACATTAGTTCAAGCTGATACCGTCATTAAAGAAGTTGAAGTTCATACAAAACTTGAAATTGATTAG
- Protein Sequence
- MFDSLPICRVCLKTSLEYIDFDTPFEVEDANIKTIDNGLTYLDCFQACTRIEIDFDENYPQSLCSSCGLELKIAFEFLQKAEIADKTLRELSANTKVEKFDDEDEVKCFLPHELHPHNDEESPRKHEKPNDSQLEDEKTYVCTVCGEQFFSQMVLNLHVNRLHTNNATDEQINATVDKVECQICDVILSIDSLETHMQMHEDESNFEENNEDKTIYEEVVVDEAEEVEFEMLDMTNVSVEEEEQDDLTNINDSQDDGTNPENYEPVDEDEEEIISQVKNETTRSDADGEEAEDDVHAEDDNEADEDLEFNVIAKIITEQEKKKQRIRKPKSKQCEICSKHVRLSAFNAHMNVHNGVRQFPCEYCFQSYFSNRSLQKHVRANHADSLNSCCSICKEKVEGQDMKAHIDEKHSHMVKCTECDHSCPELKMKDHKKRKHTESKDFLCNVCSKTFSTLGILNAHIKYHDKEFTNSIKSDACSICGKVFSSKHYLKSHMLTHREDRKLLKCEYCEKNYHTKNSLFNHMRIHTGDTIKCVMCDKEFGRQYELNVHMRFHTKEYPFECEMCQKKFAIKGHLRTHMWRHQGLKLQCEECGKLFTSTKALAEHSFYHSEMPYQCPYCPKAYPSKPKFKVHLKTAHMVEFSNEELQTMVKFPIPKRPRNRKFTLVQADTVIKEVEVHTKLEID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00665931;
- 90% Identity
- -
- 80% Identity
- -