Ebal007240.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000067.1:1650412-1656310[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0014 0.17 13.2 0.2 1 23 139 162 139 162 0.97 2 12 0.037 4.4 8.8 0.1 2 23 179 199 178 199 0.96 3 12 0.01 1.2 10.5 0.5 2 23 332 352 331 352 0.96 4 12 0.00086 0.1 13.9 1.6 1 23 358 381 358 381 0.95 5 12 7.9 9.5e+02 1.4 4.2 2 23 414 435 413 435 0.89 6 12 0.00051 0.062 14.6 0.5 1 23 441 463 441 463 0.95 7 12 2.1e-06 0.00025 22.1 3.0 3 23 476 496 474 496 0.97 8 12 1.3e-05 0.0015 19.6 6.1 2 23 504 525 503 525 0.97 9 12 4.9e-06 0.00058 21.0 0.4 2 23 531 552 530 552 0.97 10 12 0.00036 0.043 15.1 3.1 1 20 558 577 558 580 0.93 11 12 0.0023 0.28 12.5 0.4 2 23 586 607 585 607 0.91 12 12 3.1e-06 0.00037 21.6 0.3 1 23 612 635 612 635 0.98
Sequence Information
- Coding Sequence
- ATGTTCGACTCACTTCCTATATGTCGAGTATGTTTAAAAACATCACTTGAATATATTGATTTCGATACACCTTTTGAGTTGGACGCCAGCATCAAAGCAGTTGTAGACAACGGGCTCACTTATCTCGATTGTTTTCAAGCTTGCACTCGTATTGAAATCGAATTCGATGAGAATTATCCACAAAGTTTATGTAGCTCATGTGGTCTGGAATTGAAGATTGCTTTTGAATTTCTTCAAAAAGCCGAATCGGCGGATAAGACACTGCGTGAATTATCTGCAAATACCAAAGTTGAAAAATTTGATGATGATGAAATTAAATGTTTTCTTCAACCTGAAATGCTGCAGCATAATGATGAAGAAAGTTCAAGTAGAACGGACAAACATGAAGAAAGTCATTTGGATGATGAAAAAACATATGTGTGCACAGTATGTGGGGAGCAATTTTTCTCACAAATGGTTCTGAACTTACACGTTAATCGTTTACACACGAACAATACATCCGAAGAACATAATAGCACCGTTGTAGAAAAAGTTGAATGCCAGATTTGTGATGTTATTTTATCTGTACACAACTTGGAAGCTCATATGCAAATGCACGAAGAGGAATCTAATTTTGAAGAAAATAATGAAGACAAAACAGTTTATGAGGAAGTGGTTGTAGATGAGCCCGATGAAGTGGAATTCGAAATGCTTGATATGACAAATGTTTCGGTAGAAGAAGAAGATGTGCGAAATATAAGTGATTCACAAGATGCTGCTTCTGCTTCTGAAAACTATGAAGCAGTTGATGATGATGAAGAGGAAATACTTTCACAAGTTAAAAATGAAACAACACGTTCCGATGCTGATGGCGATGCTGAAAATGAAGAAGAAGGCGGTGAGGCTGACGCCGATGTAGATGAGGATGAGGATGATGCAAAATTCAATGTAATAGCTAAAATGATAACGGAACAAGAAAAACAAAAACATCGATCTAAAAAGGGTAAATACCAACAATGTGAGATTTGTTCGAAGAATGTACGAACATCTTCATTTACCGCACACATGAATGCACATAATGGAGTTAAACAATTCCCTTGCGAATACTGTTTTCAGTCTTACTTTTCTAATCGTTCATTACAAAAGCATGTAAAGGCTAACCATGCAGACAGTTTGAACTCTTGTTGTAAAATATGTAATGAAACTGTTGAAGGTCACGATATGAAAGCTCATATTGAAGAAAAACATTCGCATGTAGTGAAATGCACGGAGTGTGATCATTCATGTGCCGAGTCTAAAATGAAAGACCACGTAAAACGGAAACATACAGAATCCAAAGACTTTCTATGCAATGTTTGTTCCAAAACATTTAGTACGCTTGGCGTACTCAATGGCCATTTAAAATATCACGACAAGCAATTTACCAGCAGTATAAAATCGGATGCATGTCATATATGTGGCAAAGTATTCTCCTCGAATCACTATATGAAAAAACACTTAATTACACATCAAGAGAATCGTAATTTATTGAAATGTGATTACTGTGATAAAACCTATCACACAAAACATTCCCTATTCAATCATATGCGCATTCATACGGGCGACACAATTAAATGCGTCATGTGTGACAAAGAATTTGGCCGTCAATACGAATTAAATGTTCACATGCGTTTTCACACAAAAGAATATCCATTCGAATGTGAAATGTGTCATAAAAAATTCGCCATTAAAGGTCATTTGAGAACACACATGTGGCGTCATCAGGGTCTTAAGTTGCAGTGTGAGGAATGTGGAAAGCTTTTTACATCCACTAAAGCGCTGGCAGAACATTCTTTCTATCATTCTGAGATGCCTTATCAATGTCCGTATTGCCCAAAAGCATATCCTTCGAAACCGAAATTCAAAGTTCATTTGAAAACTGCTCACATGGTGGAATTCTCGAATGAGGAATTACAAAGAATGGTCAAATTTCCAATACCAAAAAGACCTAGAAACAGGAAGTTTACATTAGTTCAAGCTGATACTGTCATTAAAGAAGTTGAAGTTCATACAAAATTTGAAATTGATTAG
- Protein Sequence
- MFDSLPICRVCLKTSLEYIDFDTPFELDASIKAVVDNGLTYLDCFQACTRIEIEFDENYPQSLCSSCGLELKIAFEFLQKAESADKTLRELSANTKVEKFDDDEIKCFLQPEMLQHNDEESSSRTDKHEESHLDDEKTYVCTVCGEQFFSQMVLNLHVNRLHTNNTSEEHNSTVVEKVECQICDVILSVHNLEAHMQMHEEESNFEENNEDKTVYEEVVVDEPDEVEFEMLDMTNVSVEEEDVRNISDSQDAASASENYEAVDDDEEEILSQVKNETTRSDADGDAENEEEGGEADADVDEDEDDAKFNVIAKMITEQEKQKHRSKKGKYQQCEICSKNVRTSSFTAHMNAHNGVKQFPCEYCFQSYFSNRSLQKHVKANHADSLNSCCKICNETVEGHDMKAHIEEKHSHVVKCTECDHSCAESKMKDHVKRKHTESKDFLCNVCSKTFSTLGVLNGHLKYHDKQFTSSIKSDACHICGKVFSSNHYMKKHLITHQENRNLLKCDYCDKTYHTKHSLFNHMRIHTGDTIKCVMCDKEFGRQYELNVHMRFHTKEYPFECEMCHKKFAIKGHLRTHMWRHQGLKLQCEECGKLFTSTKALAEHSFYHSEMPYQCPYCPKAYPSKPKFKVHLKTAHMVEFSNEELQRMVKFPIPKRPRNRKFTLVQADTVIKEVEVHTKFEID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984461;
- 90% Identity
- -
- 80% Identity
- -