Basic Information

Insect: Meliscaeva auricollis
Gene Symbol: SALL1
Assembly: GCA_948107695.1
Location: OX403616.1:5515726-5518840[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0038 0.35 11.8 0.5 2 23 123 145 122 145 0.96

2 20 0.0014 0.13 13.2 0.4 1 23 151 173 151 173 0.98

3 20 0.00019 0.018 15.9 1.5 2 23 182 203 181 203 0.98

4 20 0.00033 0.031 15.1 1.1 1 23 209 232 209 232 0.97

5 20 0.0006 0.056 14.3 2.7 1 19 264 282 264 284 0.97

6 20 1.4e-06 0.00013 22.6 1.1 1 23 292 314 292 314 0.98

7 20 5.6e-07 5.3e-05 23.8 1.1 1 23 320 343 320 343 0.98

8 20 0.0019 0.18 12.7 2.1 1 23 353 376 353 376 0.95

9 20 1.5e-05 0.0014 19.3 2.0 5 23 475 493 472 493 0.94

10 20 4.6e-07 4.3e-05 24.1 0.4 1 23 499 521 499 521 0.99

11 20 0.00073 0.068 14.0 0.8 1 23 532 556 532 556 0.98

12 20 0.00042 0.039 14.8 0.3 1 20 562 581 562 583 0.94

13 20 0.053 5 8.2 3.9 1 23 622 644 622 644 0.97

14 20 3.4e-06 0.00032 21.4 1.9 1 23 650 672 650 672 0.98

15 20 5.7e-05 0.0054 17.5 0.5 3 23 680 700 678 700 0.96

16 20 6.3e-05 0.0059 17.4 2.7 1 23 706 728 706 728 0.97

17 20 1.3e-05 0.0012 19.5 1.2 2 23 829 850 829 850 0.98

18 20 8e-05 0.0075 17.0 2.2 1 23 856 878 856 878 0.99

19 20 1.2e-05 0.0011 19.6 0.6 1 23 885 907 885 907 0.97

20 20 0.00072 0.067 14.0 4.3 1 23 913 935 913 936 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0038	0.35	11.8	0.5	2	23	123	145	122	145	0.96
2	20	0.0014	0.13	13.2	0.4	1	23	151	173	151	173	0.98
3	20	0.00019	0.018	15.9	1.5	2	23	182	203	181	203	0.98
4	20	0.00033	0.031	15.1	1.1	1	23	209	232	209	232	0.97
5	20	0.0006	0.056	14.3	2.7	1	19	264	282	264	284	0.97
6	20	1.4e-06	0.00013	22.6	1.1	1	23	292	314	292	314	0.98
7	20	5.6e-07	5.3e-05	23.8	1.1	1	23	320	343	320	343	0.98
8	20	0.0019	0.18	12.7	2.1	1	23	353	376	353	376	0.95
9	20	1.5e-05	0.0014	19.3	2.0	5	23	475	493	472	493	0.94
10	20	4.6e-07	4.3e-05	24.1	0.4	1	23	499	521	499	521	0.99
11	20	0.00073	0.068	14.0	0.8	1	23	532	556	532	556	0.98
12	20	0.00042	0.039	14.8	0.3	1	20	562	581	562	583	0.94
13	20	0.053	5	8.2	3.9	1	23	622	644	622	644	0.97
14	20	3.4e-06	0.00032	21.4	1.9	1	23	650	672	650	672	0.98
15	20	5.7e-05	0.0054	17.5	0.5	3	23	680	700	678	700	0.96
16	20	6.3e-05	0.0059	17.4	2.7	1	23	706	728	706	728	0.97
17	20	1.3e-05	0.0012	19.5	1.2	2	23	829	850	829	850	0.98
18	20	8e-05	0.0075	17.0	2.2	1	23	856	878	856	878	0.99
19	20	1.2e-05	0.0011	19.6	0.6	1	23	885	907	885	907	0.97
20	20	0.00072	0.067	14.0	4.3	1	23	913	935	913	936	0.95

Sequence Information

Coding Sequence: ATGCAAAACAACAGCGATTTGTTTACTCCATTGCCAGTGGAATTGTCCACACCCAATGGCCTCCTCTATCAGTTCAATGAAACTACAGAGAAATATCTTAAAAATGATTTCTATACATTTGAAATGGATGGTTTCACTGTGCCAGGAATTGATGACGACGATGATATACCACCGCCCATAGTCGGTTTGAGTCCAATTCCCGAAGAGACCAGTTGTCCGATGATGGTTCACCAGCTAGAACCTTTATTTTCACCTGTTGAACCAGTTCCACTATCATCGTCAACAACAACAACAGCAGCTCCCAAGTTTTTCATACCAAATGCAAATGAAGACGAAGTACCCAGCACTTCTGTTGACAAGCAACTTTCATGTGATTTATGCGAAGAGACATTCTTCTCAACACAAGCTCTTCGTCTACACAGGCGTGTTCAACACATTTCAACAAAAGAGTTCCGCTGTCGCAAATGTCCAGCATCGTATAATTTTGAATCAAATCTGCTCCTACATTTAGCATCGCATGTTCCCAGTTGCAGTGTGAATAAGCAATGCCCTCAGTGTAAAATGGTTTTCAAACGTATTTCGAGTTTTAAGGGCCATTTGAAAATGCATCAATCTAGCGACAGATTCAAGTGCAACCGTTGTGACAAGGAATTCGAATTGAAGGGTTATTACGAGCGACATCTGGCCAAAGATCATAAACCAGGTGCTGATGGAACTATTGAGGAGATTCTATTGAAAGTGGCAAACAATACAAAGTGTCGAAGGACATCAAAGCAACTCAATGGCAAGTATAGTTGCCAATATtgtgagaagaaattcaccaaaccttgtttgctaaagcgtcatgaagtctgccacaccggagcaaagccttttcaatgcacccaatgcgatcagggattcactcaaaaatcctctctagatcgacatatgcttctgcatcaaggagtaaaggatttcaagtgtcccatgtgCAGCTACAGCTTTTCCCAAAAGAACAACCTCATAGTCCACATCCAGCGAACGCATCCACTCAATGCCGATGCCGAGAACATGTTTGCTTGTGAACACTGTCCATGTGTATTTACAAAACTAAGTAGTGTCAGTCGTCATCGAGCAATGATACATCCAGAAAGGGAACACTCAGGAAGCCTTCAGGATGACTTTCACGCGGGTGACGATGAAGACGATGATAATGTAAATGTTGCTCGAGTCATGGAACAGTTGAAAAGTTTTCAAGAATCCATGGGAATTATGGATATGAAACCACCCGCATTGGAATTGTCACTCATGAAACCACCATCGCCTGGACCAATAGTCAATACGGTCACCATTGTCGACACAATAAATCCAAAGAAAGAGAAGACTTTCAAAAAAGCCAAAGAAATCATCTACAAGGGTGAGCGGACGATGGCTTGTATTTATTGTGATAAGCCATTTAAGAGGCAATATGATCTTTTGAGgcatcatcgaacacacaccaaagaaaagccatttcagtgtaatatttgcagcaaaggtttcgccACAAATAGTGGCCTCAAAATCCACCTCAATACACACAGTTCATCGGAAGAGAAGCCAGTTAGAGCCTACCAATGTGCAGAAGAAGAATGTCATAAGCGATTTGCATCATTACGGGCCTTGGATATTCACACAAAAACCCACACGAATACTATTTCATACATTTGTCCAGTCTGTTCCAAAGTCTTCACATCTAAAGCTGGTTTCTCAGCGCACAAACATCTTGCTAAAGATCAAGAATTCGATAGTATTCGGGAGTTTCTAAAGTCTCCGGTGCAAATTGAAACAAAAAATCCCACCGAAGAAGCCAACAAAGCCAACGAGTATATGAAAAGAATCCATCAGTGTTTTGTGTGTGGATTGAAGATGAAAAAACTGTCCCATCTTCGGCAGcatgaagctactcatactggagagaaaccatttcaatgtacaatttgttttagGACATATACCACGCAGAGTTCCCTAAATCTTCATCTAAAAATCCACTTATCTGAGAAAACTCAAATTTGTCAAGAATGCAATGCAAAGTTCTTCACAAAATCGGCTCTACTTCGCCATATGATCTCTCACAGTGACGAGAGAAACTTTGCCTGTCCTTACTGCGATGAGCGTTTCAAAACCAATGACAATTGTAAAACTCACATTTCAACCCACGCTCGAAGTCTATTGGCAAGTCCTGACCCTCAAACGCCACCTCCATTGGATGAATTTAACATCGATTCTGATGAATTACCAGCGAATTCCATCACTCAGCAATATATTGCAGTTGTTGAGAGTCCTGAGAAGAATCTATCGCCGAAATTCCTTCAACTTGAATTAGTCAAAAACTGCAAAAAGCATAAACATAAAAATTTAACTGTGGAAACACTGACGACAAAGTCATCGCCAAAGAAATTATCATCATCCAAGAAATCTCTAGCCCGATCGGTTAGACAGTTGAGTCAAACTGGGCGcaaatgcagtttttgtgaaaaggttttcttcaaagctaatgatttggaacgacacatacgaactcatactaaggagaaaccatatcaatgtagcatctgttccaggcaatttgcattgatgtctactttggtgcatcacatgaagacccatgacgcacaaagagaaacttttgactgccaggtgtgcgggaagaagtatacatcgcagaaagttctgacggtacatttgagaatacatacgggagagcgaccgtttcagtgtggggtgtgtaagaaaacgtttcgAACTTCGGGACATAAGATTTCACATGTAAAGGCGCATCATAAGAAGAGAAAGTAG
Protein Sequence: MQNNSDLFTPLPVELSTPNGLLYQFNETTEKYLKNDFYTFEMDGFTVPGIDDDDDIPPPIVGLSPIPEETSCPMMVHQLEPLFSPVEPVPLSSSTTTTAAPKFFIPNANEDEVPSTSVDKQLSCDLCEETFFSTQALRLHRRVQHISTKEFRCRKCPASYNFESNLLLHLASHVPSCSVNKQCPQCKMVFKRISSFKGHLKMHQSSDRFKCNRCDKEFELKGYYERHLAKDHKPGADGTIEEILLKVANNTKCRRTSKQLNGKYSCQYCEKKFTKPCLLKRHEVCHTGAKPFQCTQCDQGFTQKSSLDRHMLLHQGVKDFKCPMCSYSFSQKNNLIVHIQRTHPLNADAENMFACEHCPCVFTKLSSVSRHRAMIHPEREHSGSLQDDFHAGDDEDDDNVNVARVMEQLKSFQESMGIMDMKPPALELSLMKPPSPGPIVNTVTIVDTINPKKEKTFKKAKEIIYKGERTMACIYCDKPFKRQYDLLRHHRTHTKEKPFQCNICSKGFATNSGLKIHLNTHSSSEEKPVRAYQCAEEECHKRFASLRALDIHTKTHTNTISYICPVCSKVFTSKAGFSAHKHLAKDQEFDSIREFLKSPVQIETKNPTEEANKANEYMKRIHQCFVCGLKMKKLSHLRQHEATHTGEKPFQCTICFRTYTTQSSLNLHLKIHLSEKTQICQECNAKFFTKSALLRHMISHSDERNFACPYCDERFKTNDNCKTHISTHARSLLASPDPQTPPPLDEFNIDSDELPANSITQQYIAVVESPEKNLSPKFLQLELVKNCKKHKHKNLTVETLTTKSSPKKLSSSKKSLARSVRQLSQTGRKCSFCEKVFFKANDLERHIRTHTKEKPYQCSICSRQFALMSTLVHHMKTHDAQRETFDCQVCGKKYTSQKVLTVHLRIHTGERPFQCGVCKKTFRTSGHKISHVKAHHKKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00665904;
90% Identity: -
80% Identity: -