Basic Information

Insect: Meliscaeva auricollis
Gene Symbol: -
Assembly: GCA_948107695.1
Location: OX403618.1:35240958-35253877[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.3e-05 0.004 17.9 2.1 1 23 408 430 408 430 0.96

2 18 1.1e-05 0.001 19.7 0.4 1 23 436 458 436 458 0.97

3 18 2.1e-05 0.002 18.8 0.5 1 23 464 486 464 486 0.98

4 18 1.8e-05 0.0017 19.1 3.1 1 23 492 514 492 514 0.97

5 18 4.1e-05 0.0039 17.9 4.7 1 23 520 542 520 542 0.99

6 18 7.5e-05 0.007 17.1 5.7 1 23 548 570 548 570 0.97

7 18 2.1e-07 1.9e-05 25.2 4.3 1 23 576 598 576 598 0.98

8 18 1.3e-07 1.2e-05 25.8 2.4 1 23 604 626 604 626 0.97

9 18 0.00018 0.017 16.0 5.7 1 23 632 654 632 654 0.97

10 18 2.2e-05 0.0021 18.8 6.5 1 23 660 682 660 682 0.98

11 18 3.7e-06 0.00035 21.2 4.5 1 23 688 710 688 710 0.98

12 18 8.7e-06 0.00081 20.1 8.1 1 23 716 738 716 738 0.98

13 18 2.1e-06 0.0002 22.0 7.9 1 23 744 766 744 766 0.98

14 18 7.9e-07 7.4e-05 23.4 7.7 1 23 772 794 772 794 0.98

15 18 0.00025 0.023 15.5 9.5 1 23 800 823 800 823 0.95

16 18 0.00021 0.019 15.7 0.5 1 23 829 851 829 851 0.97

17 18 0.00093 0.087 13.7 4.4 1 23 861 883 861 883 0.98

18 18 7.7e-06 0.00072 20.2 1.7 1 23 889 912 889 912 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.3e-05	0.004	17.9	2.1	1	23	408	430	408	430	0.96
2	18	1.1e-05	0.001	19.7	0.4	1	23	436	458	436	458	0.97
3	18	2.1e-05	0.002	18.8	0.5	1	23	464	486	464	486	0.98
4	18	1.8e-05	0.0017	19.1	3.1	1	23	492	514	492	514	0.97
5	18	4.1e-05	0.0039	17.9	4.7	1	23	520	542	520	542	0.99
6	18	7.5e-05	0.007	17.1	5.7	1	23	548	570	548	570	0.97
7	18	2.1e-07	1.9e-05	25.2	4.3	1	23	576	598	576	598	0.98
8	18	1.3e-07	1.2e-05	25.8	2.4	1	23	604	626	604	626	0.97
9	18	0.00018	0.017	16.0	5.7	1	23	632	654	632	654	0.97
10	18	2.2e-05	0.0021	18.8	6.5	1	23	660	682	660	682	0.98
11	18	3.7e-06	0.00035	21.2	4.5	1	23	688	710	688	710	0.98
12	18	8.7e-06	0.00081	20.1	8.1	1	23	716	738	716	738	0.98
13	18	2.1e-06	0.0002	22.0	7.9	1	23	744	766	744	766	0.98
14	18	7.9e-07	7.4e-05	23.4	7.7	1	23	772	794	772	794	0.98
15	18	0.00025	0.023	15.5	9.5	1	23	800	823	800	823	0.95
16	18	0.00021	0.019	15.7	0.5	1	23	829	851	829	851	0.97
17	18	0.00093	0.087	13.7	4.4	1	23	861	883	861	883	0.98
18	18	7.7e-06	0.00072	20.2	1.7	1	23	889	912	889	912	0.96

Sequence Information

Coding Sequence: ATGTTACAGCAACATGTCCAGCAACACCATCACGAAAATCCTGCCGGTGGTATTAGTGGAGTTATTCAGCCTGTTGGCGGGATCGAGTCAGATGTATCCAAACAGCAACATCCACACCATCAGTCATCACTGGTATCGGGTCCCCAACAACATCTCGGAAAATACTGGGTTGTTACGAATCTTTTTCAGGGCCCCGGTCAACCGCCGTACAATATTGGTGTAACACCTACAACttcagcagttccttcaataccgcctccgatatcatcacattcaagtgcttcggcagccaaggcggcaaactctaaacaacaacagcagcagcaacagcaagatcaacaacagcagcagcaacaactagcatcaaactcgcatactcaatcaccatcagcaCATATAGTTCCATCTGTTGGTGCTACATCCTTGCAAATACCTAACCCAATGATAAATACAGGAATGAATCAGCACCAGCTTCCAAATGGCACAATAATTGCAGGTCCACGTCATTCGGATTCTTTACACGTTCATGGAACCATGCCCAGCGACGACAATCGACACGTCTCACACGGTATGCAAGACATTAAGGAGGAGAAACCTTTTGCTAATGGGAAACCAAACCTTCATATGGCACATGTTAATCCAGCATCTTCCATTGCGTCGAAAATGAATGCTGGTAATAGCGGCGGAGGAAATAATGGCCAATCAACTGAACCCGGTGTTAGCCAAATGGTAAAACTACAGCCAGGTTCTGGGCCTAGTGGCACTAGTAGTACAGGAGGTAATGAACAACAAGAAAGCAAACCACCTCATGGCGTTGAAATGTACAAAGTCAATATTGAAGACTTGAGTCAATTCTTATCATATCACGAAGTCTTTGGAAAAATACATGGTGAAGTAATAAATCAACAACAAATATCGCACACGGTAACTCATCCTACTACAAATGTATCGACTTCAAATGCTGGCGGAAACACCTCAGTTAGTGGTTCTGTTTCCGGTTCACTACCTCCACCATCGTCGACTAATGGAAACTCCATAGTGGCTACCAATAGCCTTACCAGTTCGGGAACTGGTGCCCAAGCAGTTCCGTCGACAGGTACTGGTGGTGTCCCTACTGCACCTGGCGAGCTTATACTGCCTAAGATGGAGAACCAAGGGATGGGTGTTGATCAGAACACACCACTGCTTGCACCGGACGGAACACCAATAATGGGTGGGACACATATCTGTGACATTTGCGGAAAAATGTTCCAATTTCGCTATCAGTTAATTGTGCATCGTCGTTATCACAGTGAACGAAAGCCATTCAATTGTCAAGTTTGTGGACAGGGGTTCACCACATCGCAAGATCTCACCCGGCATGGTAAGATTCACATTGGCGGACCAATGTTCACGTGTGTGATTTGCTTCAATGTGTTTGCCAATAATGCCAGCTTGGAAAGACACATGAAACGTCATTCGACGgacaagccttttgcatgtaccatatgccagaaaacatttgcccgcaaagaacacctggataaccattttcgcagtcatactggagaaacgccgttccgttgccaatattgtgcaaaaacatttacacgaaaggaacacatggtcaatcatgtgcgtaagcatactggcgagaccccacatcgttgcgatatctgtaagaaatcttttacgcggaaagaacactatgttaatcattacatgtggcacacaggtcagacccctcatcagtgcgatatatgtggcaagaaatatacaaggaaggaacacctggccaaccatatgcgatcacatacgaatgatacaccgttccggtgtgaaatttgtggcaagagtttTAGCAGAAAGGAACATTTTACCAATCACATTTTATGGCATACAGgagaaacccctcatcgctgtgatttctgtgcgaagacgttcaccaggaaggagcacctattgaaccatgtccgccaacatacgggtgagtcaccacatcgctgcacctattgcttgaagaccttcactcgtaaggaacacctagtgaatcacattcgtcaacacacaggcgaaacacccttcaagtgcacctactgtaccaaggctttcactcgcaaggaccatatggtaaatcacatccgtcaacatactggggaatcaccacataaatgcacctattgcacgaaaactttcacccggaaagagcatctgactaaccatgtgcgtcaacatacgggtgagtcgccacatcgttgcacctactgcaaaaaaacatttacacgcaaggaacacctaacgaatcacatccggttgcacacaggcgattcgccccacaaatgcgaatactgccaaaagaccttcacacgcaaagagcatctaaacaatcatatgaggcagcattcgagcgacaacccgcactgctgcaatgtgtgcaacaagccgtttacacgcaaagagcatctgatcaatcacatgtcgcgttgtcataccggcgatcgaccatttgcttgcgaaacttgcggtaagagttttccactcaaaggcaacttgctctttcatcaacgcagccacacCAAAGGTCAAGAGTGTGAACGTCCATTTTCTTGTGAGAAATGCCCGAAAAATTTCATTTGCAAAGGTCATTTGGTTTCGCATATGCGATCCCACTCTGGAGAAAAACCACATGCTTGCACCATGTGCAGCAAGGCATTTGTAGAAAGAGGGAATCTCAAGCGTCACATGAAGATGAATCATCCAGATGCAGTTATGCCACCACCTCCAACACCTGTACCCGGGCTTCTGACTCAAATCAAACAGGAAATCAAGCCGATTATAATTCCTCATCAACCCCCAACCATGCATACCATACAACAAATCACTTCAACTGCAGGCAGCTCAAGTGCAAACAATACTGGCAATCCCGCCCTTCTGGCTCCTGGTCTAGTTCcaatggttacttctacaataacttcacacataaagcaacaaacacacttgcaacagcaacaacaacaacagcaacaacaacaacagcaacaacagcagcagcaacaacagcagcagcatcagcatcaacatcaattgcaacaacaacagcttttgcagctgtcgattcagcaagcagctcaacaagctgagcatcgccaacaacagcaacaacaacagcagcagcaacaacaacaggttcaacaacaacatcagcaacaaagccatcaacaacaccaacagcaacaacaacaagctcaacaacaatcacaacagcatcaacagcctcaaccgccttcagtgccgttagctctcattggatctgatccctcagcaatagcccgagctgctatgcaactgcaacatttgccaacaaacgtcgaacaacatcCAGTGGTGTATTAG
Protein Sequence: MLQQHVQQHHHENPAGGISGVIQPVGGIESDVSKQQHPHHQSSLVSGPQQHLGKYWVVTNLFQGPGQPPYNIGVTPTTSAVPSIPPPISSHSSASAAKAANSKQQQQQQQQDQQQQQQQLASNSHTQSPSAHIVPSVGATSLQIPNPMINTGMNQHQLPNGTIIAGPRHSDSLHVHGTMPSDDNRHVSHGMQDIKEEKPFANGKPNLHMAHVNPASSIASKMNAGNSGGGNNGQSTEPGVSQMVKLQPGSGPSGTSSTGGNEQQESKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISHTVTHPTTNVSTSNAGGNTSVSGSVSGSLPPPSSTNGNSIVATNSLTSSGTGAQAVPSTGTGGVPTAPGELILPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPVPGLLTQIKQEIKPIIIPHQPPTMHTIQQITSTAGSSSANNTGNPALLAPGLVPMVTSTITSHIKQQTHLQQQQQQQQQQQQQQQQQQQQQQHQHQHQLQQQQLLQLSIQQAAQQAEHRQQQQQQQQQQQQQVQQQHQQQSHQQHQQQQQQAQQQSQQHQQPQPPSVPLALIGSDPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00976727;
80% Identity: -