Maur016743.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- -
- Assembly
- GCA_948107695.1
- Location
- OX403616.1:106197669-106199599[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-10 1.3e-07 31.6 0.0 3 44 19 60 17 61 0.91 2 2 5.2 4.7e+03 -2.2 0.1 11 22 136 148 136 148 0.78
Sequence Information
- Coding Sequence
- ATGCCAACAGTTTATAAAAAACAAGAGTCAGCAAACCGGGGCAAATGGACTCAAGCCCAACTCACAGCCGCCGCTGAAGCTGTGCGCGACAATAAAATGTCAAAAAAAGCTGCTGCAAAAAATTTTGGAATACCCTTTACAACCTTCAGAAGGCTACTAAAAGAACCAAATACTTTAAAACCGAGTTTGGGATCCGTGTCCTGTCTTGGACAACAAAGAgaggacaaaatcgttgcccatatcaaaaaactccaggcacatggattcgcaccatccagaaaagaagtttgccaaatggcgtatggcttagctgaaaagtgtggcataagacacaattttaatcgcgtaaaaaaagaagctggaaaggattggttcatcctatttatgaatcggcatccagacctagctgttcggaaatcagagggagtttcgcaggctcgagccagagccatgtcaaaaacagaagtggctacgtattttcaattgctagaaaaaacactatccgaaaatgatttgctggacaaaccaggccatatttataatatggacgagaccggatgccagcttaacaatagaccatctttagttatagctgagaaggggtctcgcaacgtaaccgcaataacatctgctgaaagaggggagacaataacggtcatagcatgctgtaatgccgagggtacttttctgccaccagcctgtgtttttaaaggcaaaaacaaaaaggctgaattcgaagatggaatgccacctggatcagtggtttatatgggtgacaaatcggcctatgtaaacagcgagatatttttcaaatggctaaaagaacacttcataccaaggaagccagaaggcaaaaccatattaattttggatggccattcttcccattgtagcaatgtggaaatgctagagtacgcaatcgaacatcaaataatactgctttgccttccaccacacacaacccaatttttgcaacccttggacagatcgttcttcaaaccATTCAAGAGCTTTTATTATGAGGCTTGTAATAAATTCATAAAAACTAATCCAACCAGAAAGCTATCTCGCCTCAAGTTCGGCATGCTTTTGTCCCAGGCATGGGTCAAATCAGCAAATCCTAGCAATGGAATTTCAGCATTTTCATCAACTGGCATATTTCCCCTGAATCCTGATATTATCCCAGATTATGGATACATTGAAAGCAACATCACATCAAATGAAACTGAGAGTCACACCAATGAAATGCAGACTCAAAGTAATCCGCCCTTGCAATCCAATTCATCAGATAGAGATTTGACTCCACCACCACTGGAAATCATCATTCAGCAAGAGAATCCAGAAACACCAAAGGGTGATGCAAGTGAAATAACTCCAGGGAAAATGCTGAATGTGATCTCTCCAATACCGTCCACCTCACGGGGTATCACACATCATCCGAGGGCTCAAAAATCTCGAGTTTTGACATCATCTCACAACTTGGCTTCTCAAAAACAAAAACTTTTAAAGAAGTTAAAGGTCAAAAAGGTCCTTAAAAAGACGAAATATAACAAAAAGAATACCAATGGTGGGCCTGAAGTCAGCTCTtcagaggacgagaaaatgtcgttgcatgatgaatcggatggacctgaagacttcggtgaaaacacttgtgttggctgtggcgaggattataatgaaacaacaaaaccggacgaatggattaagtgcatcgtatgccacttttggtctcacgattcttgCACATCGTTTAACAACACTTGCAACAAATGTGGCAAAAAAAATATCAAAAAAAAGTAG
- Protein Sequence
- MPTVYKKQESANRGKWTQAQLTAAAEAVRDNKMSKKAAAKNFGIPFTTFRRLLKEPNTLKPSLGSVSCLGQQREDKIVAHIKKLQAHGFAPSRKEVCQMAYGLAEKCGIRHNFNRVKKEAGKDWFILFMNRHPDLAVRKSEGVSQARARAMSKTEVATYFQLLEKTLSENDLLDKPGHIYNMDETGCQLNNRPSLVIAEKGSRNVTAITSAERGETITVIACCNAEGTFLPPACVFKGKNKKAEFEDGMPPGSVVYMGDKSAYVNSEIFFKWLKEHFIPRKPEGKTILILDGHSSHCSNVEMLEYAIEHQIILLCLPPHTTQFLQPLDRSFFKPFKSFYYEACNKFIKTNPTRKLSRLKFGMLLSQAWVKSANPSNGISAFSSTGIFPLNPDIIPDYGYIESNITSNETESHTNEMQTQSNPPLQSNSSDRDLTPPPLEIIIQQENPETPKGDASEITPGKMLNVISPIPSTSRGITHHPRAQKSRVLTSSHNLASQKQKLLKKLKVKKVLKKTKYNKKNTNGGPEVSSSEDEKMSLHDESDGPEDFGENTCVGCGEDYNETTKPDEWIKCIVCHFWSHDSCTSFNNTCNKCGKKNIKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984161;
- 90% Identity
- iTF_01396427;
- 80% Identity
- iTF_00984161;