Maur002617.1
Basic Information
- Insect
- Meliscaeva auricollis
- Gene Symbol
- cheC_2
- Assembly
- GCA_948107695.1
- Location
- OX403618.1:25432035-25433858[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 1.1e-07 31.8 0.0 2 38 16 52 15 58 0.89
Sequence Information
- Coding Sequence
- ATGCCACGAAATTACGTAAGGACGACACTACGCGCATCATGGTCTGAAAAAGACATGGAAGAAGCGATGGAGAAGGTGATGAACAAAACGTTGGGAGTCAATGAAGCTAGCAGGGAGTTCAACATACCATCAAGAACTCTGAGAAGGCATATTCTAAAAGGCATGTCTAATAAATCGCTTGGTCGGTCAACAACTCTTTCGTTGGAACAAGAAAAAAAATTGGTTGCCCACATAAAGAAATTGGAGAAAGTTGGTTTCGCTCCTGACCGTAAAGACGTTAAAGAAATTGCATTTCGGTTCGCCGATCGTCTGGGAGTCGCACACCGTTTCTCTAACGTCTCTAAAGCGGCTGGTAATGTGTGGCTCAATGGATTTTTGAAACGAAATCCAGATATATCGACCAGGAAATCTGAAGGCCTATCGCTAGCTAGAGCTTATGGTATGAATCGAGGCGATGTTAAAGAGTTTTTCGACATACTCAAATCAATATACGAAGAGCATGACCTTCTTAAGAACCCTGGGAACATCTACAATATGGATGAGACTGAAATACAAGTCAATAACAAACCTGGGAAGGTTTTGGCATCAAAAGGAGCTAAGGACGTGTACACACTTACAAGTTCCGAAAAAGGAGAAAATGTTACGATCATAGCCTGTTGCAATGGGGAAGGGAACTTTTTGCCCCCCGTTCTAATTTTTAAGGGCACTTACACCAAGCCTCAGTTTTTCGATGGTCTCCCACCTGGTTCAGACGTGTACATGAACAAGAAGTCGTCATACGTTAACACTGATTTGTTTTTGAAATGGTTCCAGGAAATATTTCTACGCAAAAAAGCTCCAGGCAAAGCCTTGCTTATTCTTGATGGCCACAGCTCGCATTCCAATAACATTCAGTTGCTAGAGATGGCTGAACAGAACAATGTCATACTACTGTGCCTTCCTAGCCACACGACTCACGCTTTACAGCCGCTCGACAGATGTTTTTTCAAACCTTTGAAAACATACTTTTTTCAGGAGGCAAAAAATTGGATGATAAACAATAAAGATAAGAAACTAACAAGGTACGATGTATCAAAATTAATCGGAAAAGCTTGGGGAAAATCGGCGAGTGTATCAAATGGTATCTCTGCATTAAAATCAACAGGGATTTTTCCTTACGACCCAAGTGCTATACCGGATCACTTTTTTTCGTTTTCGGATGCATTGCATCAACAGAACTTAATTGAAACTAATCCAGACATTTTGGAATTTGATCAAAACACCCCTGAGCCACAACCGGGACCATCTGGCCTTCAGATATCACCAACAAAAATATTAGGTGAAGTTCAGCCGCAAGCAGGTCCATCAGGAATAACTCCTTCAAAAATATTGACAGAAATTCGGCCAGTCCCAAAAATACCGCTTATGAATTCCAAAAGGAAACAAAAAACAGTTGTTCTCACCTCACCAGAAAACATGAACAAACGAAGATTAATGGCTGAAAATAAGAAAAATAAAGAGGATGCAAAGAACCGGAAGTTAGAGCTGAAGAAAAATGCTGCAACAAAGAAAAAACCAGAAAAGAACAGAAAACTTTATTCTGATAGCAGTGAAGACGAAGACGGTGACGATATAAAAACCAGCGAAGATGAAATATCAGATGAAGGGGATAGTAATAAGTGTATTGAGTGTACCGAAAATTATTTCAAAACGCTTTCATCTGAAGACTGGATTCAGTGCATATCTTGCCAGGGTTGGTTGCATGAGTTTTGTACTATGTACTTACCAAATTGTAACAGCTGCGGCCGCAAAGCAAAGCGACAGGCCATGTTACAGAATGAATAA
- Protein Sequence
- MPRNYVRTTLRASWSEKDMEEAMEKVMNKTLGVNEASREFNIPSRTLRRHILKGMSNKSLGRSTTLSLEQEKKLVAHIKKLEKVGFAPDRKDVKEIAFRFADRLGVAHRFSNVSKAAGNVWLNGFLKRNPDISTRKSEGLSLARAYGMNRGDVKEFFDILKSIYEEHDLLKNPGNIYNMDETEIQVNNKPGKVLASKGAKDVYTLTSSEKGENVTIIACCNGEGNFLPPVLIFKGTYTKPQFFDGLPPGSDVYMNKKSSYVNTDLFLKWFQEIFLRKKAPGKALLILDGHSSHSNNIQLLEMAEQNNVILLCLPSHTTHALQPLDRCFFKPLKTYFFQEAKNWMINNKDKKLTRYDVSKLIGKAWGKSASVSNGISALKSTGIFPYDPSAIPDHFFSFSDALHQQNLIETNPDILEFDQNTPEPQPGPSGLQISPTKILGEVQPQAGPSGITPSKILTEIRPVPKIPLMNSKRKQKTVVLTSPENMNKRRLMAENKKNKEDAKNRKLELKKNAATKKKPEKNRKLYSDSSEDEDGDDIKTSEDEISDEGDSNKCIECTENYFKTLSSEDWIQCISCQGWLHEFCTMYLPNCNSCGRKAKRQAMLQNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253601;
- 90% Identity
- iTF_01253601;
- 80% Identity
- -