Mqua010218.1
Basic Information
- Insect
- Melipona quadrifasciata
- Gene Symbol
- -
- Assembly
- GCA_001276565.1
- Location
- KQ435783.1:469927-473458[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.8e-13 8.4e-10 37.9 0.0 1 39 301 340 301 344 0.90 2 4 1.5e-12 2.6e-09 36.3 0.1 2 39 356 393 355 396 0.94 3 4 5.3e-19 9.4e-16 56.9 0.0 2 45 411 455 410 455 0.97 4 4 6.1e-19 1.1e-15 56.7 0.1 1 42 462 504 462 505 0.97
Sequence Information
- Coding Sequence
- ATGATACTCTATCCGCTGAAACGAACCTCACTGTTGAAAACAGCCGATCAACTAAAGATTAAGGGACTTTGCGAGGTGCCCGAAAGTAGAGACGGCCCACCCTCGGTAAGCCTGAGTTCGCCACCAAGGGAACCCGGCACTCCTAGAATAAATTTCACCAAGTTGAAGAGACATCATCAAAAGTACAAAAGGCCTAGAACTACGTTCGAACCTCGCGCTACAGATTCGAGGCATTACGATCGATATAAAGAAGaggaatcgaacgaaaattacgaTTGGGAGAACAAAGAGAATCACATAGACTGGCAACCCGAAGATGAGGAGTGTACGGAGGCAACTGCGGGAGCAGTAGTGCTGGAAACTTGCCAACGCAACAGCAACAATAGTACCACCACTGGCAACACCacaaccaccaccaccactaccaccaataacaacaacaacaacaatagcAATAATAACTCCAACGGCAACGgtGATATGTTTTGTCATACAGGTCTCGGTCATTACGGTCATCATCCGGATCCCGGAGAGGTTGATCTACCTCCAGAAACTCAACCAACACCGCCGAGTGCCACATTGGTCGGTACTACAATTACGCATTTAAGGGACCCGGAACATCATTCCACAGAGATTCAAAATTGTgacagtgtaaaaataaagtttgaaacgTTGCACACAATGGATTCGTCGGACACGATTGATATCGATAGCCACATGTCAGATCGAGCGAGCGTTAGTTCAAAGAACGCAGCTGATAGCGACAACATGATGATGATCACACCGGAATTGCTTGGTTTGATGCCTTCTGGAAGTTCGATACATTCGGATTCTGGTGAGAATAACTCGAGGGGCCATTCCGGACAATCCAGCTCTCATCATCACGGTTCAAAATCGTGGACTCAAGAGGACATGGATGCTGCCTTAGAAGCCTTACGGAATCACGATATGAGCCTTACAAAAGCCTCTGCAACGTTCGGTATACCTTCGACGACTTTGTGGCAACGAGCGCATCGGCTGGGAATCGATACTCCAAAAAAAGATGGACCTACCAAATCGTGGAGCGACGAGAGTTTAAACAACGCGCTCGAAGCACTACGAACTGGGACAATATCAGCAAACAAAGCTTCAAAAGCATTTGGAATACCGTCGAGTACCTTGTACAAAATCGCGAGAAGGGAAGGCATCAGGCTGGCTGCACCTTTCAATGCAAGTCCCACCACCTGGTCGCCTGCCGATCTCGATCGTGCCCTCGAAGCGATACGTTCCGGCCAAACGTCTGTGCAGAGGGCGTCGACAGAATTCGGTATACCAACAGGAACATTATACGGTCGATGCAAAAGAGAGGGTATCGAACTTAGCAGGAGTAATCCTACACCTTGGAGCGAAGATGCTATGACTGAAGCTCTCGAAGCTGTTAGATTAGGTCATATGAGCATTAATCAAGCGGCAATCCACTATAATTTACCGTACTCCTCCTTGTACGGCCGTTTCAAGAGGGGAAAATACGAAGAACCAGCGGTGGGTGAAATATCGCAAGACGGTAGCAGTCCTCATTTTCATCAAAGCCCGAGTCAAAACCATTCGTCCGCTATACCCGATCAAATGCCGTACCAAGGCAGCTGA
- Protein Sequence
- MILYPLKRTSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHQKYKRPRTTFEPRATDSRHYDRYKEEESNENYDWENKENHIDWQPEDEECTEATAGAVVLETCQRNSNNSTTTGNTTTTTTTTTNNNNNNNSNNNSNGNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPEHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSIHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPAVGEISQDGSSPHFHQSPSQNHSSAIPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00230773;
- 80% Identity
- -