Basic Information

Insect: Melipona bicolor
Gene Symbol: ZNF236
Assembly: GCA_030673865.1
Location: JAHYIQ010000017.1:93553-101561[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0037 0.41 11.8 1.8 2 23 183 204 182 204 0.96

2 26 0.00012 0.013 16.4 1.1 1 23 210 232 210 232 0.98

3 26 3.6e-06 0.0004 21.2 0.4 2 23 238 259 238 259 0.97

4 26 0.0096 1.1 10.5 0.3 3 23 267 287 265 287 0.96

5 26 7.9e-05 0.0087 17.0 0.9 2 23 298 319 298 319 0.98

6 26 8.7e-07 9.5e-05 23.2 1.1 1 23 340 362 340 362 0.99

7 26 1.7e-05 0.0019 19.1 0.7 1 20 368 387 368 390 0.95

8 26 3.2e-05 0.0036 18.2 0.7 1 23 396 419 396 419 0.95

9 26 0.0031 0.34 12.0 2.2 3 23 430 451 428 451 0.97

10 26 2.2e-06 0.00024 21.9 2.1 1 23 577 599 577 599 0.98

11 26 6.9e-05 0.0076 17.2 3.3 1 23 605 627 605 627 0.99

12 26 0.0079 0.87 10.7 2.8 1 23 633 655 633 655 0.97

13 26 0.0032 0.35 12.0 6.7 1 23 746 768 746 768 0.98

14 26 3.9e-05 0.0043 18.0 5.1 1 23 774 796 774 796 0.99

15 26 0.00017 0.019 16.0 0.8 3 23 804 824 802 824 0.97

16 26 0.00047 0.052 14.6 7.6 1 23 830 852 830 852 0.98

17 26 2.8 3.1e+02 2.7 1.3 2 23 1256 1277 1255 1277 0.94

18 26 0.00082 0.09 13.8 1.3 1 23 1283 1305 1283 1305 0.98

19 26 0.0027 0.3 12.2 1.4 2 23 1312 1333 1311 1333 0.96

20 26 1.2e-07 1.3e-05 25.9 1.4 2 23 1413 1434 1412 1434 0.98

21 26 0.00085 0.094 13.8 3.5 1 23 1440 1462 1440 1462 0.99

22 26 0.00011 0.012 16.6 1.9 1 23 1468 1490 1468 1490 0.98

23 26 0.0065 0.72 11.0 3.2 1 23 1496 1518 1496 1518 0.98

24 26 3.2e-06 0.00035 21.4 0.6 2 23 1745 1766 1744 1766 0.97

25 26 1.6e-05 0.0017 19.2 4.5 1 23 1772 1794 1772 1794 0.98

26 26 9.2e-07 0.0001 23.1 0.7 1 23 1800 1823 1800 1823 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0037	0.41	11.8	1.8	2	23	183	204	182	204	0.96
2	26	0.00012	0.013	16.4	1.1	1	23	210	232	210	232	0.98
3	26	3.6e-06	0.0004	21.2	0.4	2	23	238	259	238	259	0.97
4	26	0.0096	1.1	10.5	0.3	3	23	267	287	265	287	0.96
5	26	7.9e-05	0.0087	17.0	0.9	2	23	298	319	298	319	0.98
6	26	8.7e-07	9.5e-05	23.2	1.1	1	23	340	362	340	362	0.99
7	26	1.7e-05	0.0019	19.1	0.7	1	20	368	387	368	390	0.95
8	26	3.2e-05	0.0036	18.2	0.7	1	23	396	419	396	419	0.95
9	26	0.0031	0.34	12.0	2.2	3	23	430	451	428	451	0.97
10	26	2.2e-06	0.00024	21.9	2.1	1	23	577	599	577	599	0.98
11	26	6.9e-05	0.0076	17.2	3.3	1	23	605	627	605	627	0.99
12	26	0.0079	0.87	10.7	2.8	1	23	633	655	633	655	0.97
13	26	0.0032	0.35	12.0	6.7	1	23	746	768	746	768	0.98
14	26	3.9e-05	0.0043	18.0	5.1	1	23	774	796	774	796	0.99
15	26	0.00017	0.019	16.0	0.8	3	23	804	824	802	824	0.97
16	26	0.00047	0.052	14.6	7.6	1	23	830	852	830	852	0.98
17	26	2.8	3.1e+02	2.7	1.3	2	23	1256	1277	1255	1277	0.94
18	26	0.00082	0.09	13.8	1.3	1	23	1283	1305	1283	1305	0.98
19	26	0.0027	0.3	12.2	1.4	2	23	1312	1333	1311	1333	0.96
20	26	1.2e-07	1.3e-05	25.9	1.4	2	23	1413	1434	1412	1434	0.98
21	26	0.00085	0.094	13.8	3.5	1	23	1440	1462	1440	1462	0.99
22	26	0.00011	0.012	16.6	1.9	1	23	1468	1490	1468	1490	0.98
23	26	0.0065	0.72	11.0	3.2	1	23	1496	1518	1496	1518	0.98
24	26	3.2e-06	0.00035	21.4	0.6	2	23	1745	1766	1744	1766	0.97
25	26	1.6e-05	0.0017	19.2	4.5	1	23	1772	1794	1772	1794	0.98
26	26	9.2e-07	0.0001	23.1	0.7	1	23	1800	1823	1800	1823	0.97

Sequence Information

Coding Sequence: atggaaaaaatGTTGATGCGACAGAATGTGGTCACAGAATCTCCACATGTCGAAACAATACCTATAAATTTTGTTGCTACTGAGGATGGTCGAACTCTTTTGGCATTGACTGAACATAAAGACGATATGTTGGAAATTGTTGCAACTCCGGTCATGCTTGTTGGACAAAGTGGAACAGCCACGTCGTTGAtagatgtaaaaaatttaaatggaaatttaatattacactcgCCTGTTTTTCAAATAAGCGTGGAAAATATATCTGTCAACGAGTCAGAACTACAACAGTCGGCACAGAGCTTGGAACCAGAATCATCCAATGACGTTGATCAGATGAAGTTGCAATCGTGCAGAGAGCTGACGTTTAAGAAAACAGATATGCAACAGTATCAATCTCTTTCTCTGAACGACTTGATAGACGGTGAAAAGGATGAAACATCTTCTAAGGAGAAGTCGGTAAATCCAGTTGcgaaaaaaaacaattctgGAAGACCTAAGAAAAGCAAAGcaatttcttcgatttcttcgcaaGATACAAATAGCTTGATGTGCGACATTTGCCACCAAGAGTTTGGCAAACAAACATTATATCGAAAACATATGGAAAATCACGCAGAGGAAAAACCACATCGATGTCCAAAATGTTCCGCGTCGTTCAACGTGCCGACAAATTTTACGCTTCACATGGCAACTCATAATACAGGTGAACCAAAATGTCCAGAATGCGgtaaaaaatttgcaagaatGGCCAGCTTAAAGTCTCACATGTTGTTgcacgagaaagaagaaaatttattctgtaCAGAATGTGAAGATGCTTTCTCCACGAAAACTCAATTGGATGCACATTTGAAGCTTCATGGAGAAAAATGGGCGATTGAAGAAGTACGAAAGTGTAAACTATGTAATAAACAGTTTAGTCAACCAGCTTTGTACAGACTTCATATTCGTGAACATTATAGATTGCAGACTAAAGTagtgaaacaaacgaaaagagGGACAAAACACAAAACAATGTATAAATGTACCATATGTTTGAAGTCTTTTCAGAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTTaagTGTACGATATGCGGTCGCGCTTTCACGCAAAAGAATTCGCTACAGATCCATACGTGGCAGCACAATGGTATTCGACCTCATGCTTGTGAATTTTGCAATGCCAAGTTTAGTCAGAAAGGTAATTTAAATGCCCATATAATGAGGGTTCACAATGTCCCAGATGGAGAACCTATATACGGATGTAATTATTGTTCATgcgtatttaaaaaacttgGCAGTTTGAATGGTCACATGAAACGTATGCATACAGATGTAAACGAGGACAATGCCGTTAAGAGTAATACTCATTCGAGTGATAACGTGGAGTCCGATATACGTGCAACGGtaaataatgttataacaCAATTGGCATCTTTGGAATCCAACGCTCATCAAACGGAATCGTCAAATTTCGAGTCGCGTCTGTTATTGGAAAATACAgcgaaaaaagatattttgcaACAAGCGTTGAAAAACAGTGGTCTTCCTAGTAAAAACAAAACTTCTACTTCTGAAGGTATTCCGGAAGCAAAAAAGTTTGGAGCTCGGATTAATTTTGTAACGTTATTGGATCGAGCGCCTGACGGTGATACGAGaaaatatttgacgatAAAGCAACGGTGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCACAAAGAGTTTAAGAAACCGTCGGATTTGATACGTCATTTGCGAGTACATACTCAAGAGAAGCCTTTCAAGTGTACCTACTGTCATCGTTCGTTCGCTTTGAAATCTACAATGATAGCGCACGAACGCACGCATTCGAGCGTCAAACGTTACGCTTGTGGTTCTTGCGACAAAACATTCGTGTGTCATAGTAGTTTAATTGCGCATACCAGATCGCATGCAAAGtctgaaaattgtttcgataaAACCATTGACAACGAGAAGGATTCCGACACGCACGTTACGATCGAAACTGATATTTATTCTGCTAATCAGTCGAAAACCCAAACAAAGggtaaatcaaaattatcacCGGAAGCAGAAAGTCTAGTACCTCAGGTGATCTTGCAAGAACCGTTAGTAATTAGCGACactggaaataaaatttccgtgGCTCCTTcgggaaagaagaaacgtgCTTGTGACGCAGCTGCTGATCAGGCCAGGCCCCATAAATGTTGGATTTGTCAGGCGGCATTTAGAAAGATCAGCCATTTGAAGCAACATCATCGCCGTCATACAGGAGAGCGTCCGTACAAATGCACAAAATGCGATAGGAGATTCACATCGAATAGCGTTCTAAAATCGCATTTGCATACTCACGAGGATTCGAGACCATACGGTTGTTCTGTTTGTAATGCGAAATTCTCTACGCAGAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACATGAAAATACATAAACACGAATTGGCACAGCGGCAATTGGAACAACAGAAAATGAGAATACAAGAACAAGCTTCGGACAAGTTGAATACGAAGGAAAGTTCTAAACAAGAAGCCGCTCTCGAAtcgtcttcttcctcttctgtCTCTGTCACTACTATTAATTCCACCATTACCACCAATATTTCTATCACAACCACCGCCAGCATCAACACCACTTCTCCCATCGTCACAACGTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCGTTTCAACCACAGCTCGGATCAGAGTTTTCACAAGCTTTttctgaatttcaaaatattaccgaagaaaaagaaaaaataaggCCAGTTTTACCAACAAATTGCGATGACACAGCATTTATTAATCAGAACGTGGCAGGAATAGCTGTAGCGAATCTCGAAAATTCACCAATATTACAGGCCGATGAAGCTGGTTCGGTCACTTTGCCGGTTTACTCTGGCGATCAGACACTGACACCGGAAAGTATACGAGAAATAGAAGAAACTTTAAATCAacagttttttaatatcggAATGAACTTTAACTTGGGAGGAAGTAGTCACTCGAGACATTCAGACGGTACAAACACGAATGATTTTGGCCATATGAAAGAACAGCAGCAGCCTGtgttaaatgttatatatgaAAACAATAACGACAACAACAGCGGTAACAGTAATGGCAACGGCAACGTAGAAACATCCGGAGAACATGTGTTTCCAACGCAATTAGATTCATTTGAGATGGATCACATTACTTTGCAATCGGATGGCGAAATCGACATTGGATTAGATACAAGAAATTCAACTAGCATGGCGAGTATACTACCTAGGAATATGAAAGATGAACATCGACTCTCTGTTTGCGTTGCGACACCAGATAACATAAACGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTGGTATTTGTTTCTCAGtcaaatttttccaagaagGAAAACGTAACGAACGAATTCGCTGTAGAAGAAACtcaaaaaaacaatattcacAAAGAATGTACAATCAATCAAATCTTTTTTACAGAAGACATTCGGGGAACGGCGCAAGATTTGAAGGTTCAATCAAATATGCACGCTTTGTCATCCAATGTTGCAGAAATCGTTGAAACCGCTACGAGTAAAATATCCTGTGAACAATCGCTGTTACAGTGTCACATGTGCAGCCAACAAGGATTCACAACAGTTGGTTTGAAGGAACATTTGACGAGTCACCGTGGAACGAAGGAGTATCAGTGTACAGAGTGctcttcgaaattttatacaaacgGTGGATTGAATAGACATTCGAAGATTCATGTCGTTAAACAATCACTTAAATGTTCGTCGTGTGAGAAGCAGTTTAACAATAGAGTCGAACTGCGATCgcataataaaattcatgaaaCGTCAATGTGGAACGCTTCGGGGACAAATGCCAATGCAGATAATTCGGTGCTTTCATTGGAAATGCATCAGTCACGGGTCGTAAATGGTCATTCGCCAACAAATAATATCGCGATAGAATCTGATTCTACCGTTTCGGAAAAAGTTTTGCTGGATACAGTAGCTGAAAGAGAAGTAATGAATCAAGTAGAAAATATATTCGTggggaaaaaggaacgaaaagaGTATACGAATAAATGCAAGTATTGCCCAAAAACTTTTCGCAAACCGAGCGATCTTATAAGACATGTACGCACACACACCGGGGAACGACCGTACAAATGCGATTACTGCAGTAAAAGTTTCGCCGTAAAATGTACTCTGGATTCTCATACAAAAGTTCATACGGGAAAAAAGACATTTCGTTGTCATGTGTGCAATAGTCTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTTTGCATACGGGTTCGAAACCATTCAGATGTCTTATTTGCGATTCGAGATTTCGAACATCCGGCCATAGAAAGGTACACTTGTTgaaacacgcgcgcgaacacaaAGACaacgcaaaaagaaaacaaaagcaTTTAAAAGTTGCGGTCATAGCAGAAGTGGCGGCTGATCTTGAGAAATGTAATgagaaggagaggaaaatGGACAGTTTCGAGGAAAAGCAGCAACTAGCGCAAGAAGAGCAACAGCAGCTTTCGCAGACAGTCGCAGGATTAACGTCTCATTTAGAGACATATAGTATCGAAGCAGCAACTTCCTGTTTAACcgatcaaattaatttcgacgcGGAAGGTATCGGATCGAACAACAATCAAACGATAGTGTCCATAAACGAAAGCAATCAGTTGGTtacgaatttacattttcttttgaCAAATGGCCTTGTTACCATTCAAACCGAAGAATCATTATTGTCGCAAACGTCCGCATCCTCGGTTAACAATTCGCATCATCGACCACCAGTCGGGGTTCCCGATGCTGGATGTGCATTATTATCAACATCCAGTGTTGTATCCGATACTAACGAGCAGCATGCCAAGGAAGAAATTCATATAGAACAAATGTTGAAAACGCCATCGAATAATTGCCTTTTAACGGTATCGACTGTGCCACCGCCGCGATTAGAACAATGTTCAAAGGTGACTACGGAAGAGACGTTATCAGTGGTGGTAGCCGATAAATCAACGGTTAAGAGAAATCTGTCGAAAAAGGAGTGCGACATTTGTGGGAAAACATTCACGAAACCGTATCAAGTCGAAAGGCATAAACGAATTCATACGGGTGAACGACCGTACAAGTGTGACCTGTGTACGAAATCATTTGCTCAAAAATCAACTCTACAGATGCATCAAAAACATCATACTGGCGATCGGCCATACGCTTGCCCGTATTGTGAATATTCCTTCACGCAGAAAGGCAATCTTCGAACACATGTGAAACGCGTTCATCAATTGGATACCGTGGACGCTAAGAAGTGGAAGCGCGGCCGTCAATCCTTTCTGTCGAAAACATCTTTTCAAGAAAACACTATCGAAGATAAGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTTCTGAAATAG
Protein Sequence: MEKMLMRQNVVTESPHVETIPINFVATEDGRTLLALTEHKDDMLEIVATPVMLVGQSGTATSLIDVKNLNGNLILHSPVFQISVENISVNESELQQSAQSLEPESSNDVDQMKLQSCRELTFKKTDMQQYQSLSLNDLIDGEKDETSSKEKSVNPVAKKNNSGRPKKSKAISSISSQDTNSLMCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWAIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKNSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPDGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEDNAVKSNTHSSDNVESDIRATVNNVITQLASLESNAHQTESSNFESRLLLENTAKKDILQQALKNSGLPSKNKTSTSEGIPEAKKFGARINFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCHRSFALKSTMIAHERTHSSVKRYACGSCDKTFVCHSSLIAHTRSHAKSENCFDKTIDNEKDSDTHVTIETDIYSANQSKTQTKGKSKLSPEAESLVPQVILQEPLVISDTGNKISVAPSGKKKRACDAAADQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSVCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKMRIQEQASDKLNTKESSKQEAALESSSSSSVSVTTINSTITTNISITTTASINTTSPIVTTSSSTFSDNLALSRLGSVELSFQPQLGSEFSQAFSEFQNITEEKEKIRPVLPTNCDDTAFINQNVAGIAVANLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNFNLGGSSHSRHSDGTNTNDFGHMKEQQQPVLNVIYENNNDNNSGNSNGNGNVETSGEHVFPTQLDSFEMDHITLQSDGEIDIGLDTRNSTSMASILPRNMKDEHRLSVCVATPDNINVEQSEKSGVQAVVFVSQSNFSKKENVTNEFAVEETQKNNIHKECTINQIFFTEDIRGTAQDLKVQSNMHALSSNVAEIVETATSKISCEQSLLQCHMCSQQGFTTVGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQSLKCSSCEKQFNNRVELRSHNKIHETSMWNASGTNANADNSVLSLEMHQSRVVNGHSPTNNIAIESDSTVSEKVLLDTVAEREVMNQVENIFVGKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCLICDSRFRTSGHRKVHLLKHAREHKDNAKRKQKHLKVAVIAEVAADLEKCNEKERKMDSFEEKQQLAQEEQQQLSQTVAGLTSHLETYSIEAATSCLTDQINFDAEGIGSNNNQTIVSINESNQLVTNLHFLLTNGLVTIQTEESLLSQTSASSVNNSHHRPPVGVPDAGCALLSTSSVVSDTNEQHAKEEIHIEQMLKTPSNNCLLTVSTVPPPRLEQCSKVTTEETLSVVVADKSTVKRNLSKKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTVDAKKWKRGRQSFLSKTSFQENTIEDKSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00982422;
80% Identity: -