Basic Information

Insect: Melipona beecheii
Gene Symbol: ZNF236
Assembly: GCA_032399605.1
Location: JAUCMO010000291.1:13254016-13262005[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0036 0.3 11.8 1.8 2 23 182 203 181 203 0.96

2 26 0.00012 0.0097 16.4 1.1 1 23 209 231 209 231 0.98

3 26 3.5e-06 0.00029 21.2 0.4 2 23 237 258 237 258 0.97

4 26 0.0094 0.77 10.5 0.3 3 23 266 286 264 286 0.96

5 26 7.7e-05 0.0063 17.0 0.9 2 23 297 318 297 318 0.98

6 26 8.4e-07 6.9e-05 23.2 1.1 1 23 339 361 339 361 0.99

7 26 3.6e-06 0.00029 21.2 0.7 1 20 367 386 367 389 0.95

8 26 3.2e-05 0.0026 18.2 0.7 1 23 395 418 395 418 0.95

9 26 0.003 0.24 12.0 2.2 3 23 429 450 427 450 0.97

10 26 2.1e-06 0.00017 21.9 2.1 1 23 576 598 576 598 0.98

11 26 6.7e-05 0.0055 17.2 3.3 1 23 604 626 604 626 0.99

12 26 0.0077 0.63 10.7 2.8 1 23 632 654 632 654 0.97

13 26 0.0031 0.26 12.0 6.7 1 23 745 767 745 767 0.98

14 26 3.8e-05 0.0032 18.0 5.1 1 23 773 795 773 795 0.99

15 26 0.00016 0.013 16.0 0.8 3 23 803 823 801 823 0.97

16 26 0.00046 0.038 14.6 7.6 1 23 829 851 829 851 0.98

17 26 4.8 4e+02 1.9 1.3 2 23 1254 1275 1253 1275 0.93

18 26 0.00079 0.065 13.8 1.3 1 23 1281 1303 1281 1303 0.98

19 26 0.0026 0.21 12.2 1.4 2 23 1310 1331 1309 1331 0.96

20 26 1.2e-07 9.7e-06 25.9 1.4 2 23 1411 1432 1410 1432 0.98

21 26 0.00083 0.068 13.8 3.5 1 23 1438 1460 1438 1460 0.99

22 26 0.00011 0.0088 16.6 1.9 1 23 1466 1488 1466 1488 0.98

23 26 0.00043 0.036 14.7 2.5 1 23 1494 1516 1494 1516 0.98

24 26 3.1e-06 0.00026 21.4 0.6 2 23 1742 1763 1741 1763 0.97

25 26 1.5e-05 0.0012 19.2 4.5 1 23 1769 1791 1769 1791 0.98

26 26 8.9e-07 7.4e-05 23.1 0.7 1 23 1797 1820 1797 1820 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0036	0.3	11.8	1.8	2	23	182	203	181	203	0.96
2	26	0.00012	0.0097	16.4	1.1	1	23	209	231	209	231	0.98
3	26	3.5e-06	0.00029	21.2	0.4	2	23	237	258	237	258	0.97
4	26	0.0094	0.77	10.5	0.3	3	23	266	286	264	286	0.96
5	26	7.7e-05	0.0063	17.0	0.9	2	23	297	318	297	318	0.98
6	26	8.4e-07	6.9e-05	23.2	1.1	1	23	339	361	339	361	0.99
7	26	3.6e-06	0.00029	21.2	0.7	1	20	367	386	367	389	0.95
8	26	3.2e-05	0.0026	18.2	0.7	1	23	395	418	395	418	0.95
9	26	0.003	0.24	12.0	2.2	3	23	429	450	427	450	0.97
10	26	2.1e-06	0.00017	21.9	2.1	1	23	576	598	576	598	0.98
11	26	6.7e-05	0.0055	17.2	3.3	1	23	604	626	604	626	0.99
12	26	0.0077	0.63	10.7	2.8	1	23	632	654	632	654	0.97
13	26	0.0031	0.26	12.0	6.7	1	23	745	767	745	767	0.98
14	26	3.8e-05	0.0032	18.0	5.1	1	23	773	795	773	795	0.99
15	26	0.00016	0.013	16.0	0.8	3	23	803	823	801	823	0.97
16	26	0.00046	0.038	14.6	7.6	1	23	829	851	829	851	0.98
17	26	4.8	4e+02	1.9	1.3	2	23	1254	1275	1253	1275	0.93
18	26	0.00079	0.065	13.8	1.3	1	23	1281	1303	1281	1303	0.98
19	26	0.0026	0.21	12.2	1.4	2	23	1310	1331	1309	1331	0.96
20	26	1.2e-07	9.7e-06	25.9	1.4	2	23	1411	1432	1410	1432	0.98
21	26	0.00083	0.068	13.8	3.5	1	23	1438	1460	1438	1460	0.99
22	26	0.00011	0.0088	16.6	1.9	1	23	1466	1488	1466	1488	0.98
23	26	0.00043	0.036	14.7	2.5	1	23	1494	1516	1494	1516	0.98
24	26	3.1e-06	0.00026	21.4	0.6	2	23	1742	1763	1741	1763	0.97
25	26	1.5e-05	0.0012	19.2	4.5	1	23	1769	1791	1769	1791	0.98
26	26	8.9e-07	7.4e-05	23.1	0.7	1	23	1797	1820	1797	1820	0.97

Sequence Information

Coding Sequence: atggaAAAAATGTTGATGCGACAGAATGTGGTCACAGAATCTCCACATGTCGAAACAATACCTATAAATTTTGTTGCTACTGAGGATGGTCGAACTCTTTTGGCATTGACTGAACATAAAGACGATATGTTGGAAATTGTTGCAACTCCGGTCATGCTTGTTGGACAAAGTGGAACAGCCACGTCGTTGAtagatgtaaaaaatttaaatggaaatttaatattacactCGCCTGTTTTTCAAATAAGCGTGGAAAATATTGTTAACGAGTCAGAACTACAACAGTCGGCACAGAGCTTGGAACCAGAATCATCCAATGACGTTGATCAGATGAAGTTGCAATCGTGCAGAGAACTGACGTTTAAGAAAACAGATATGCAACAGTATCAATCTCTTTCTCTGAATGACTTGATAGACGGTGAAAAGGATGAAACATCTTCTAAGGAGAAGTCGGTAAATCCAGTTGcgaaaaaaaacaattctgGAAGACCTAAGAAAAGCAAAgcaatttcttcgatttcttcgcaaGATACAAATAGCTTGATGTGCGACATTTGCCACCAAGAGTTTGGCAAACAAACATTATATCGAAAACATATGGAAAATCACGCAGAGGAAAAACCACATCGATGTCCAAAATGTTCCGCGTCGTTCAACGTGCCGACAAATTTTACGCTTCACATGGCAACTCATAATACAGGTGAACCAAAATGTCCAGAATGCggtaaaaaatttgcaagaatGGCCAGCTTAAAGTCTCACATGTTGTTgcacgagaaagaagaaaatttattctgtaCAGAATGTGAAGATGCTTTCTCCACGAAAACTCAATTGGATGCACATTTGAAGCTTCATGGAGAAAAATGGGCGATTGAAGAAGTACGAAAgtgtaaattatgtaataaacaGTTTAGTCAACCAGCCTTGTACAGACTTCATATTCGTGAACATTATAGATTGCAGACTAAAGTagtgaaacaaacgaaaagagGGACAAAACACAAaacaatgtataaatgtacCATATGTTTGAAGTCTTTTCAGAAGCCAAGTCAATTGATGCGGCATATTAGAGTGCATACTGGTGAAAAACCTTTTaagTGTACGATATGCGGTCGCGCTTTCACGCAAAAGAGTTCGCTACAGATCCATACGTGGCAACACAATGGTATTCGACCTCATGCTTGTGAATTTTGTAATGCCAAGTTTAGTCAGAAAGGTAATTTAAATGCCCATATAATGAGGGTTCACAATGTCCCAGATGGAGAACCTATATACGGATGTAATTATTGTTCATgcgtatttaaaaaacttgGCAGTTTGAATGGTCACATGAAACGTATGCATACAGATGTAAACGAGGACAATGCCGTTAAGAGTAATACTCATTCGAGTGATAACGTGGAGTCCGATATACGTGCAACGGTGAATAATGTTATAACACAATTGGCATCTTTGGAATCCAACGTTCATCAAACGGAATCGTCAAATTTTGAGTCGCGTCTGTTATTGGAAAATACGgcgaaaaaagatattttgcaACAAGCGTTGAAAAACAGTGGTCTTCCTAGTAAAAACAAAACTTCTACTTCTGAAGGTATTCCGGAAGCAAAAAAGTTTGGAGCTCGGATTAATTTTGTAACGTTATTGGATCGAGCGCCTGACGGTGATACAAGaaaatatttgacgatAAAGCAACGGTGCGTAGGAAACGTGAGATGGTACGCGTGTACATTTTGTCACAAAGAGTTCAAGAAACCGTCGGATTTGATACGTCATTTGCGAGTACATACTCAAGAGAAGCCTTTCAAGTGTACCTATTGTCATCGTTCGTTCGCTTTGAAATCTACAATGATAGCACACGAACGCACACATTCGAGCGTCAAACGTTACGCTTGCGGTTCTTGCGACAAAACATTCGTGTGTCATAGTAGTTTAATTGCGCATACCAGATCGCATGCAAAGtctgaaaattgtttcgataaAATCATTGACAACGAGAAGGATTCCGACACGCACGTTACGATCGAAACTGATATTTATTCTGCTAATCAGTCGAAAACCCAAACAAAGGGTAAATCAAAACTATCACCGGAAGCAGAAAGTCTAGTACCTCAGGTGATCTTGCAAGAACCGTTAGTAATTAGCGACactggaaataaaatttccgtgGCTCCTtcgggaaagaagaaacgtgcTTGTGACGCAGCTACTgatcaggccaggccccataAATGTTGGATTTGTCAGGCGGCATTTAGAAAGATCAGCCATTTGAAGCAACATCATCGCCGTCATACAGGAGAGCGTCCGTACAAATGCACAAAATGCGATAGGAGATTCACATCGAATAGCGTTCTAAAATCGCATTTGCATACTCACGAGGATTCGAGACCATACGGTTGTTCTGTTTGTAATGCGAAATTCTCTACGCAGAGCAGCATGAAAAGACACTTGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCTTATTGTCACAAGACTTTTAAAACTTACGTCAATTGTCGGAAACACatgaaaatacataaacaCGAATTGGCACAGCGGCAATTGGAACAACAGAAAATGAGAATACAAGAACAAGCTTCGGACAAGTTGAACACGAAGGAAAGTTCTAAACAAGAAGCGGCTCTCGAAtcgtcttcttcctcttctgtCTCTGTCACTACTATTAATTCCACCATTACCACCAACATTTCTATTACAACCACCGCCAGCATCAGCACCACTTCTCCCATCGTCACAACGTCCTCTTCTACGTTTTCAGATAATCTTGCACTTTCTCGTCTTGGATCGGTTGAATTGTCGTTTCAACCACAGCTCGGATCAGAGTTTTCACAAGctttttctgaatttcaaaatattaccgaagaaaaagaaaaaatacggCCAGTTTTACCAACAAATTGCGATGCCACAGCATTTATTAATCAGAACGTGGCAGGAATAGCTGTAACGAATCTCGAAAATTCACCAATATTACAGGCCGATGAAGCTGGTTCGGTCACTTTGCCGGTTTACTCTGGCGATCAGACACTGACACCGGAAAGTATAcgagaaatagaagaaactttaaatcaacagttttttaatatcgGAATGAACTTTAACTTGGGAGGAAGTAATCACTCGAGACATTCAGACGGTGCAAACACGAATGATTTTGGCCATATGAAAGAACAGCAGCAGCCTGtgttaaatgttatatatgaaaacaacgacaacaacagCGATAACAGTAATGGCAACGGCAACATAGAAACATCCGGAGAACATGTGTTTCCGACGCAATTAGATTCATTTGAGATGGATCACATTACTTTGCAATCGGATGGTGAAATCGACATTGGATTAGATACAAGAAATTCAACTAGCATGGCGAGTATACTACCTAGGAATATGAAAGATGAACATCGACTTTCTGTTTGTGTTGCGACACCAGATAACATAAACGTTGAACAATCAGAAAAGTCTGGTGTGCAAGCGGTGGTATTTGTTTCTCagtcaaatttttccaagaagGAAAACGCAACGAACGAATTCGCTGTAGAAGAAACtcaaaaaaacaatattcacAAAGAATGTACAATCAATCAAATCTTTTTTACAGAAGACATTCGGGGAACGGCGCAAGATTTGAAGGTTCAATCAAATATGCACGCTTTGTCATCCAATGTTGCAGAAATCGTTGAAACCGCTACGAGTAAAATATCCTGTGAACAATCGCTGTTACAGTGTCACATGTGCAGCCAACAAGGATTCACAACAATTGGTTTAAAGGAACATTTGACAAGTCACCGTGGAACGAAGGAGTATCAGTGTACAGAGTGctcttcgaaattttatacaaacgGTGGATTGAATAGACATTCGAAGATTCATGTCGTTAAACAATCACTTAAATGTTCCTCGTGTGAGAAGCAGTTTAACAATAGAGTCGAACTGCGATcgcataataaaattcatgaaaCTTCAATGTGGAACGCTTCAGGGACAAATGCCAATGCAGATAATTCGGTGCTTTCATTGGAAATGCATCAGTCACGGATCGTAAATGGTCATTCGCCAACAAATGATATCGTGATAGAATCTGATTCTACCGTTTCGGAAAAAGTTTTGCTGGATACAGTAGCTGAAAGAGAAGTAATGAATCAAGTAGAAAATATATTCGTggggaaaaaggaacgaaaagagTATACGAATAAATGCAAGTATTGCCCAAAAACTTTTCGCAAACCGAGTGATCTTATAAGACATGTACGCACACACACCGGGGAACGACCGTACAAATGCGATTACTGCAGTAAAAGTTTCGCCGTAAAATGTACTCTGGATTCTCATACAAAAGTTCATACGGGAAAAAAGACATTTCGTTGTCATGTGTGCAATAGTTTGTTTGCGACCAAAGGTAGCTTGAAAGTTCACATGCGTTTGCATACGGGTTCGAAACCATTCAGATGTCCTATTTGCGATTCGAGATTTCGAACATCCGGCCATAGAAAGGTACACTTGTTGAAACACGCACGCGAACACAAAGACaacgcaaaaagaaaacaaaaacatttaaaagttGCGGTCATAGCAGAAGTGGCGGCTGATCTTGAGAAATGTagtgagaaagaaaggaaaatggaCAGTTTCGAGGAAAAGCAGCAACTAGCGCAAGATGAGCAACAGCAGCTTTCGCAGACAGTCGCAGGATTAACGTCTCATTTAGAGACATATAGTATTGAAGCAGCAACTTCCTGTTTAAccgatcaaattaatttcgacgcgGAAGGTATCGTATCGAACAACAATCAAACGATAGTGTCCATAAACGAAAGCAATCAGTTGGTtacgaatttacattttcttttgacAAATGGCCTTGTTACCATTCAAACCGAAGAATCATTATTGTCGCAAACATCCGCATCCTCGGTTAACAATTCGCATCATCGATCAGTCGGGGTTCCCGATGCTGGATGTGCATTATTATCAACATCCAGTGTTGTATCCGATACTAACGAGCAACATGCCAAGGAAGAAATTCACATAGAACAAATGTTGAAAACGCCATCGAATAATTGCTTTTTAACAGTATCGACTGTGACACCGCCGCGATTAGAACAATGTTCAAAGGTGACTACGGAAGAGACGTTATCAGTGGTGGTAGCTGATAAATCAACGGTTAAAAGAAATCTGTCGAAAAAGGAGTGCGACATTTGTGGGAAAACCTTCACGAAACCGTATCAAGTCGAAAGGCATAAACGAATTCACACGGGTGAACGACCGTACAAGTGTGACCTGTGTACGAAATCATTTGCTCAAAAATCAACTCTACAGATGCATCAAAAACATCATACTGGCGATCGGCCATACGCTTGCCCGTATTGTGAATATTCCTTTACGCAGAAAGGCAATCTTCGAACACATGTGAAACGCGTTCATCAATTGGATACCGTGGACACTAAGAAGTGGAAGCGCGGCCGTCAATCCTTTCTGTCGAAAACatcttttcaagaaaacaCTATCGAAGATAGGAGTCTAAATTTAGACAACATATCGTTTGTAGAGCTTCTGAAATAG
Protein Sequence: MEKMLMRQNVVTESPHVETIPINFVATEDGRTLLALTEHKDDMLEIVATPVMLVGQSGTATSLIDVKNLNGNLILHSPVFQISVENIVNESELQQSAQSLEPESSNDVDQMKLQSCRELTFKKTDMQQYQSLSLNDLIDGEKDETSSKEKSVNPVAKKNNSGRPKKSKAISSISSQDTNSLMCDICHQEFGKQTLYRKHMENHAEEKPHRCPKCSASFNVPTNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWAIEEVRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNVPDGEPIYGCNYCSCVFKKLGSLNGHMKRMHTDVNEDNAVKSNTHSSDNVESDIRATVNNVITQLASLESNVHQTESSNFESRLLLENTAKKDILQQALKNSGLPSKNKTSTSEGIPEAKKFGARINFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCHRSFALKSTMIAHERTHSSVKRYACGSCDKTFVCHSSLIAHTRSHAKSENCFDKIIDNEKDSDTHVTIETDIYSANQSKTQTKGKSKLSPEAESLVPQVILQEPLVISDTGNKISVAPSGKKKRACDAATDQARPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSVCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKMRIQEQASDKLNTKESSKQEAALESSSSSSVSVTTINSTITTNISITTTASISTTSPIVTTSSSTFSDNLALSRLGSVELSFQPQLGSEFSQAFSEFQNITEEKEKIRPVLPTNCDATAFINQNVAGIAVTNLENSPILQADEAGSVTLPVYSGDQTLTPESIREIEETLNQQFFNIGMNFNLGGSNHSRHSDGANTNDFGHMKEQQQPVLNVIYENNDNNSDNSNGNGNIETSGEHVFPTQLDSFEMDHITLQSDGEIDIGLDTRNSTSMASILPRNMKDEHRLSVCVATPDNINVEQSEKSGVQAVVFVSQSNFSKKENATNEFAVEETQKNNIHKECTINQIFFTEDIRGTAQDLKVQSNMHALSSNVAEIVETATSKISCEQSLLQCHMCSQQGFTTIGLKEHLTSHRGTKEYQCTECSSKFYTNGGLNRHSKIHVVKQSLKCSSCEKQFNNRVELRSHNKIHETSMWNASGTNANADNSVLSLEMHQSRIVNGHSPTNDIVIESDSTVSEKVLLDTVAEREVMNQVENIFVGKKERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHAREHKDNAKRKQKHLKVAVIAEVAADLEKCSEKERKMDSFEEKQQLAQDEQQQLSQTVAGLTSHLETYSIEAATSCLTDQINFDAEGIVSNNNQTIVSINESNQLVTNLHFLLTNGLVTIQTEESLLSQTSASSVNNSHHRSVGVPDAGCALLSTSSVVSDTNEQHAKEEIHIEQMLKTPSNNCFLTVSTVTPPRLEQCSKVTTEETLSVVVADKSTVKRNLSKKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTVDTKKWKRGRQSFLSKTSFQENTIEDRSLNLDNISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_01417840; iTF_00983096;
80% Identity: -