Mbic007319.1
Basic Information
- Insect
- Melipona bicolor
- Gene Symbol
- lilli_1
- Assembly
- GCA_030673865.1
- Location
- JAHYIQ010000006.1:2976239-2992493[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.023 6.2e+02 -0.1 27.2 44 159 40 154 37 158 0.41 2 2 2.9e-09 7.7e-05 22.7 0.4 327 382 233 289 221 304 0.79
Sequence Information
- Coding Sequence
- ATGGACGTTGCCCCGTTGCTTATTCGCGATTCACGCTCGTTCGGCCGGCGAACAAATCTGGAAAATGGATCAGGCGAGGAATACACGCCCGGCGTGGCCGTGAATCCGGACGCCCGGGACAGCACGACGCAGCAAATTCAGTTGAAATTGGGCAACTATTCTCTGGTGAAGCATCTTCTGGACGAGCCGAAACGGCTGATCGGCATCGAGGGTGTACCGCCGAGTCCTGCCCCGCCTCCGGCCGTGTGCCTTCGGCTGAGTTCCAATTCGGTCGGCTCAAATTCCAGGAGCTCGCCCTCCTCTCAGGAATTCAAGAAACCCGGAGGACCGAGGATCGACGGTAGCGGTTCGTCCTCGTCggcgttgtcgtcgtcgtcatcctCGGCGTCTTCCTCGGCGTCGTCcacttcgtcgtcgtcgagtcatcaacaacaacaacaacaaacacaacaacaacagcaacaaccaCGCGGCGGTTTCGTGAAACCGGCCGACGGAAAGCCCCCGTACGGAGGCAGGGGTAGCTACCCCGGGCAGCCGCTGAAGCTGCACGGGGCCAGTGGCAACGATCATCGGAGCCACGGTTTATTACCCCCCAAAGGACCGCCCACGAATTCACCTGGGAACGGTACGCTCGTTAACAATTCGAATATCGGGAATTCCAACGGCAGCAGGCTTCATTCTGTCGGCAGCAGCAGACTGTCCAGGTTACCTCTCGATAACGGAACAAGTTCGAGGCCTGGTCCCGCCGAGAACTCGGCCGATGTGGAGAATATTCTAAAAGAAATGACCATGCCGCCCACACCTCTGACGGCCATCGCCCAGACGCCGAGGAAGGAACTCGAGTCAAAGTTCACGTTCAATCCGATGCTGGCAAAGTTGACCGAAGTGACGCCGCAGGAAGCCACGAAGCCCCGTAAGTAA
- Protein Sequence
- MDVAPLLIRDSRSFGRRTNLENGSGEEYTPGVAVNPDARDSTTQQIQLKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPPPAVCLRLSSNSVGSNSRSSPSSQEFKKPGGPRIDGSGSSSSALSSSSSSASSSASSTSSSSSHQQQQQQTQQQQQQPRGGFVKPADGKPPYGGRGSYPGQPLKLHGASGNDHRSHGLLPPKGPPTNSPGNGTLVNNSNIGNSNGSRLHSVGSSRLSRLPLDNGTSSRPGPAENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPMLAKLTEVTPQEATKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -