Mbic002449.1
Basic Information
- Insect
- Melipona bicolor
- Gene Symbol
- lov
- Assembly
- GCA_030673865.1
- Location
- JAHYIQ010000001.1:26602313-26604388[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-18 4.7e-15 55.6 0.0 1 44 480 523 480 524 0.96
Sequence Information
- Coding Sequence
- atgaaacgtttgaattGCAGCCCATTCTTCGAAAGGATATTTGCGGAGCACCCCTGTAAACATCCGGTGATTGTGCTAAAGGACTATCCCGGTCACGAAATAGCGGCGCTGATCGACTTTATGTACCGCGGCGAGGTGAGAGTTGGTCGCGAGGAACTTCCAGGACTGATGAGAGCCGCGGAAAGTCTGCAAGTGCGTGGATTAACCTCATCGGAACCGAGGCCAACGTCACCTCCGGAAACACCGACCGCCGATCTTCTCCTAGGCGAGCCGTCGACACCCGAAGGCGCCAGGCAAGAAACTCCGGAGGAGGATGACAACGCGTCGGAAAGCACGGTGACGCCGTCCACGCGAGAACCAGCGCCAGTAACGATGCCCACTGTTTTTCACCCAGCGAGGGACCACCGTGATAGGTTACCGCATATGGGCCATTTGAACTTTGGAATGCGCGAGTTGCGTGAGAGTTGCGGATCGCCTCTTCTACCTCGGCGAAAACAGGCACGCCCTCGAAGGAGATCCGGTGAGTTAGTGCCGCAAGATCTTAGCCGGCCTCATCCACCGCTGAGCCTTAGCCCACTAGCCAGTGGTTTGAACCTGACCAGTAGTCATCAACAGtcgcaacagcaacaacagcatcACCAACAGTTGTCCAGTTCGAGCTCACAGAACCAACAACAGCAGGAAGATATGGCGGAAAACCTTTCGATGAAAAGATGTTTGTCGCCGAGCGGAGCCGAACAACACAACGTAAAAGCGGAGAGCAGTGAAACCGCGAGTAGTCCAAGGGGATCGCCGTTAACCGGCACAAGTCTGCTGCACCCGGACGGTTCCCTTCAAGATATTCCCTCTGCTGCGgcagcagcggcggcggcagccGCGGTAGGTTTGCCAAACATGTCGGCTTTATCGCTAACGCCGCCGCATCATCACAGCGAGTACCTGACGAGCCTGGGCCAATTAGCGGCCCAGTGGTTACCGAGTCATCCACAGAGCCAACTGCCACATTCATCTCAGGGTCATCATCCGCGGGATGGCAGTCCGCACGGACCTAATAGAACGCATCCGTatcaacagcagcagcaacaacagcaacaacaacagcaacaagaACCTCCGCTGACAGTACGACGAAGTTCCGTGACGACGATGTTCCCGTTGGATGGTGTCGCGTCGTTAGGTGGTGGACTGTTTCCTCATGCAGGTGCTCTCGAGAGAGGATCTCTTTTAGCGGATCTTCACGATAATTTTAAACAGGAAACGCTGCAGGGGCTTTTCGGTACGGCGGGTCTGAGCGGTCATCATTCGGGGAAAAAGCCAAAGAAACACAGAGGTGACAGTGACGCACCGCGCAGATGGGGAGACCACAGTCGAGGTTTGCCTGTAGGAAGGCCGAAGGGTCAGCACAGCGCACCCAGAGGTGGACCTCCTAGATCTTGGACGAATGCGGAACTGACCGAAGCGCTGCAACACGtttggaacaaaaaaatgACCACGTCCCAAGCGAGCAGGATCTTCGGTATACCGTACAACAGTCTATTGATGTACGTGCGAGGGAAATACGGGAAAAGTTTGAAACTCGAGCAATTGAGAAGGGATTGCACGGGCGCGACGACGGGCGAAGTAGTAATGAATTCGCTGAACAACAACGTTAAGGCCGTCCAGCCGCCGACGCAAATGACCCATCCACTTGCCAGTCTACCACCGCATCCGGGCGAAGACGGTGGATTTCCTCATCATTCGTTGCTCGGCGGTAATCTACCACAGGGTTTCTTTCCTGACTTTACCGCAGCTCCGTTCCCAGTGCCAGTTAGTATGGTGCATTTACTTCCACCGAGCGAACAAAAGGCTTTTGAACCTCCGGCGAATCCCGGCGGCAGCAGCGGCaacagcggcggcggcggtggcggtggcagTGGCGGTGGcagtggcggtggcggtgatCTCTCCACCGCACGGAGCAGTCGATCGCCGTCACCAATcgatcatcatcatcatcatcatcatcatcacgAGTCGCTGCAACCGCAACCGCCACAGTCGGCGCCCGCATTACTACAGCAAAACGGTTCGGATTAG
- Protein Sequence
- MKRLNCSPFFERIFAEHPCKHPVIVLKDYPGHEIAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLTSSEPRPTSPPETPTADLLLGEPSTPEGARQETPEEDDNASESTVTPSTREPAPVTMPTVFHPARDHRDRLPHMGHLNFGMRELRESCGSPLLPRRKQARPRRRSGELVPQDLSRPHPPLSLSPLASGLNLTSSHQQSQQQQQHHQQLSSSSSQNQQQQEDMAENLSMKRCLSPSGAEQHNVKAESSETASSPRGSPLTGTSLLHPDGSLQDIPSAAAAAAAAAAVGLPNMSALSLTPPHHHSEYLTSLGQLAAQWLPSHPQSQLPHSSQGHHPRDGSPHGPNRTHPYQQQQQQQQQQQQQEPPLTVRRSSVTTMFPLDGVASLGGGLFPHAGALERGSLLADLHDNFKQETLQGLFGTAGLSGHHSGKKPKKHRGDSDAPRRWGDHSRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVVMNSLNNNVKAVQPPTQMTHPLASLPPHPGEDGGFPHHSLLGGNLPQGFFPDFTAAPFPVPVSMVHLLPPSEQKAFEPPANPGGSSGNSGGGGGGGSGGGSGGGGDLSTARSSRSPSPIDHHHHHHHHHESLQPQPPQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01539520;
- 90% Identity
- iTF_01417621;
- 80% Identity
- iTF_00983085;