Basic Information

Insect: Melipona beecheii
Gene Symbol: -
Assembly: GCA_032399605.1
Location: JAUCMO010000243.1:6323175-6332479[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00037 0.03 14.9 0.7 2 19 454 471 453 475 0.89

2 17 3.4e-05 0.0028 18.1 4.2 1 23 481 503 481 503 0.98

3 17 0.00033 0.027 15.0 0.1 3 23 511 532 509 532 0.94

4 17 0.41 34 5.3 1.8 1 23 539 562 539 562 0.98

5 17 5e-05 0.0041 17.6 0.7 1 23 566 588 566 588 0.97

6 17 0.0023 0.19 12.4 0.5 1 23 594 616 594 616 0.98

7 17 0.00018 0.015 15.9 2.3 1 23 622 644 622 644 0.96

8 17 0.0027 0.22 12.2 0.1 1 17 649 665 649 666 0.90

9 17 0.68 56 4.6 1.6 1 23 1182 1205 1182 1205 0.98

10 17 0.00021 0.017 15.6 0.3 1 23 1211 1233 1211 1233 0.97

11 17 0.1 8.5 7.2 0.4 1 23 1239 1261 1239 1261 0.97

12 17 1e-05 0.00082 19.8 0.3 2 23 1268 1289 1267 1289 0.97

13 17 0.71 58 4.6 0.3 2 23 1296 1318 1295 1318 0.94

14 17 2.2e-05 0.0018 18.7 0.5 1 23 1322 1344 1322 1344 0.98

15 17 0.025 2.1 9.1 0.7 1 23 1349 1371 1349 1371 0.98

16 17 2.7e-07 2.2e-05 24.7 0.5 1 23 1377 1399 1377 1399 0.98

17 17 0.00045 0.037 14.6 1.1 1 21 1404 1424 1404 1425 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00037	0.03	14.9	0.7	2	19	454	471	453	475	0.89
2	17	3.4e-05	0.0028	18.1	4.2	1	23	481	503	481	503	0.98
3	17	0.00033	0.027	15.0	0.1	3	23	511	532	509	532	0.94
4	17	0.41	34	5.3	1.8	1	23	539	562	539	562	0.98
5	17	5e-05	0.0041	17.6	0.7	1	23	566	588	566	588	0.97
6	17	0.0023	0.19	12.4	0.5	1	23	594	616	594	616	0.98
7	17	0.00018	0.015	15.9	2.3	1	23	622	644	622	644	0.96
8	17	0.0027	0.22	12.2	0.1	1	17	649	665	649	666	0.90
9	17	0.68	56	4.6	1.6	1	23	1182	1205	1182	1205	0.98
10	17	0.00021	0.017	15.6	0.3	1	23	1211	1233	1211	1233	0.97
11	17	0.1	8.5	7.2	0.4	1	23	1239	1261	1239	1261	0.97
12	17	1e-05	0.00082	19.8	0.3	2	23	1268	1289	1267	1289	0.97
13	17	0.71	58	4.6	0.3	2	23	1296	1318	1295	1318	0.94
14	17	2.2e-05	0.0018	18.7	0.5	1	23	1322	1344	1322	1344	0.98
15	17	0.025	2.1	9.1	0.7	1	23	1349	1371	1349	1371	0.98
16	17	2.7e-07	2.2e-05	24.7	0.5	1	23	1377	1399	1377	1399	0.98
17	17	0.00045	0.037	14.6	1.1	1	21	1404	1424	1404	1425	0.94

Sequence Information

Coding Sequence: atggaGCTAGGGAAAGACGAGGCGCAGATCTGTCGCCTCTGCGGCCAGTACGAGAGCATATATATTGACGTGTTCGGCGAAGAAGGCACCAAGCGATTTTTAGGATTGAAGATTCATACTAAAATCAACATTCTGATAGATGAAAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAATGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACAAGTGTTACGCGATCGATACAATCTACCACCCTTAACAGAGATTGCTGAAGTAAAGACTGAAGATACACCAAGTGCACCAAGTACATCTACAAACGATAGTAACAATGAAACCAACAATAATCTTAATTCTTCAACTGATGAAAGCATTAAAGAAGCAGAGCAACGTGTTCTAAGAACAGCTACAAAAGctcaaagaaatttaagaagTCAACAACAAGTAAGAGGCAATGAAGAAGGTGCGAACGATCAAAATAGTGTTCAAAGTACAACCGAAGACAATATTGAGAATGtacaaattgttcaaaattctGAAACAACCCCTACGCGATGGCTTAGAAGTAGACAGAATACAGaaacaattgtaataaatgatGCAACGATTGATATACCAATCGCAAATAGACTTAGAAGTCACGACAATACTGCCACAGAAATAACTGTTAGTCCGTGTAATAATTCCAATGAAAACGGTGATAAACTGATTGGAAAGCAGCAAGATCCACATACTATTCAAATTCCAACCTCAGCATTGAATAAACTTCTCAGTATCGTGTCGAACTCCCCAAACATCGAAGTTTCTGTCAAAGAATCCAGAAATCAAGCCAGCGACATCGAAGATATCAGTTTTACTGTAGAATTATGTAAGAAGGAAAGCGACGATGTAGCTACTGTCCGAGCGCGAGTATTTCCGGATCAAGGTTCTTGCTTAGTGGATAAGGCAATCGTTGGtcttttacaaaatcaaaGTTGTGTAGAagtaaatagtataataaataccaTTATTAACAGTAGCTTGAAGAACGGCAGTTCGACCAAATTGAGGGACTCTGCTGAATTCGAGCAAAAATGGCAAGCCTCTCAAAATCCAGAAGAACTCTTTAGGATTGACGGAGAAGAGATTCGTGTCGACGACAACGTCGAGCATATCGTCACAGATAATCAAAATGGATACTCTTGTAAATTATGTTGTAAATTCTATGAACGCAAGGACAAATGTATGGTTCACGTGAAGACCCATCTTGGTATTAAACAGTATACCTGTATCCTGTGCAACGCGAAATTCGTATGCAAATCTGATGTAATGAAGCATATTCGATGTTCACATACTAACCCTAGGCCGATACAATGCCCAAAATGTCCAAAGAGATTTAAgtcaaagttttatttaatggAGCACGACAATGTGCACAAGGGTGTAAGACCTTATTCTTGTACGGACTGTGGTCAGAGTTATCACCACAAAGTATCGCTACAAATCCACATGAAGTCACACTTACCTCCGCAGAATTTAGCTTGCGAATATTGCGGCAAGGTGTTCCCGTACCGTACGAGATTATTAAGTCATATAGCTAgtgtacatttaaaaaatcgtcGTAACTTCAGGTGTCGATTTTGTTACAATCTATATTCGAGTCTTTCAGTTTTGAATGAACACATTAAAACGCGACACGCGACTACATATACTTGTGAAATTTGTAGTAAAACGTTCAAAGTTGCGTCCAAGTATAAGGCTCACGTGTTGCAACATTCGAATCCTAAACCATTTGTATGTAATGTTTGTAACAATAGATATGCATCAAAAGCATTCCTGAATGAACATCTATTGAAGCACGAGGGGCTGAGGAAACACATTTGTCAAAAGTGTGGTGCAAGGTTTGCTCAAGCTAGTCATCTTGCTGCACACCGGCACGTGCATGGTGAAAAAAAGCATGCTTGTCCGGAGTGCGGACGAAAATTTAACAGGCGTGATAACATGAAGgtaaaagaaaatgatggACTACCTCAGATTGTTTGTATGCGATGTTTGGGTACACTGGAGTTCTTATGTGATTTTTATGAGCGCTGTCATCTTGTTCAAAAAGGATTTTCGAAAGCTAGTCAAAATACAAGAGATGAAAAGTTCCAGGAAGACAGTGATGTAGAATCAGATAAGGAGAACACTGTCCCATCAAGGAATGAGACCAAATGGAAAGTCAAGGTTTCATCATCTGACAAATTAAAGAGTACAAAAAATTGTCTTCCTGAAGATAATACATACAAGACtgaaagggaaaaggaaagcGTTAATCTCGTAGATAATAATTCCAgtactaataattattcagTTACGCAAACTACAGTACAATTAAGCAATGTAActtcatataaaaaattccCAGGAAATGATCAGCGTAACGTTAGTAGTTTAAAACataggaatttaaaaaataatattgtaaaaaagtCTGCAATTCgtacaaaattaacaaatggGCTGTCGCAAAAAGATGAGGATATTGATATCAAATCAGACCAGTCAGCACGACGTAAAAGAGGACGAAAAAGTAAATTCGAGAAGATGAGAGGAACAATCCGAAATGATTGTTTTTTTAAGGTCCGTTGCGAAACTGATTTCTCTCTGACAAACAGGAGTGATAATATTGATAACaatagaagaaacaaaaatttgaacaatgaACGCGAAAAAAGTAGCCTACCTGTTATTTGTGATAATGATAATTCTAATAGGGTGATCAATAATGTTATGACTTTGCCATCTCAAATCGACGTGGAACAGGTGATTGATACGCCCTTGATCTCTATAGATTTTACCAAAAGCAATGAAGCTGATATAGTGATTGATAAATCACCAGAAATAGAATCTAATGATGAAAGCATGAAGAAAATTGGCAATTGTTTGAACAATACAGAAGACTGCTCTGTAAAAAGTAAAGCAAAAAGTGCTTCTTTTCTTAAACagagtaaaaatttaacaaggaATCAAAGTTTGCTAGCAGAAGAATCTAAAAAAACTGAAGATAGTGAGACTAATTTAATAACAGTACCTgacaataattttgatatagaaattatttctgttaATAATCAACAGTCTGAAATATTCACAGAACAAAATCGTATGACTATTATAAAATCTTCTTCTAATAAAGTATCAAATCCAAAGACGATAGAGCAAGATTGTACAGAAGTTTGTATTGGGATAGATATAATAGATGaaagtatcaaaaataaagaatgcaATGTTTTCAATGAACATTCATTATCTCGAGACAATGAAAATAGTTTTAGTGGGACTCAAAGTAAAAATAGACCGTTtggtaaaatttccaaattaataAGTGATGAACAGAAACAAATCATTGAAACTTATTACGTGGTGAATATGTCAGCGATAAACTCGGAAGAAGTACAAAGAAACATAACGGTagttgataaaaagaatatacgCTGCAATATTTGTGGTAGTCTCTATCTTAGAATGGATAAATGTCAaGTACATATTTGGGGACATTTACAAATGAAACCGTATCAATGCAAAGCTTGTGATTTTGCTACAGTTACTGTTAGCAATGTTCGTTGCCATATCAGAAAGAGtcacttaaaaattaaaccaTTCGCATGCCATCTTTGTGAAAAACGATATGTAACTGCTGTATTATTAGAAGAACACATTAATAGTCATACAGGTGCGCGTCCATACAAGTGTGAACTCTGTGACTTTGCAGGTTCCAGTAGGCAAATGCTAAGTTACCATAGTGCTACTCATAAACCACTAAAGGATGTGAGCTGCAAAATTTGTGGGAAGGAGTTTTATTCAAAAACTAGATTACGCGCGCACATGATTGTACATAACAAGGATAAAGCTGTTATGTGTAAACTATGTTCTGCTTATTTATCTAACGCAGAAGCATTAGAAATgcatcataaaaatattcatatgcAAGATTATGTGTGTAATGTATGTGGCAAACGTGTCAAATCAAGAAAAGCTTTATACAATCATCAAAATGTTCATGCTGCagcaaaatataaatgcacTCTATGTCCAAATGTGTATAAGAGTAGCCAAATACTAAAAGAACATCTTTTGAAGCATGAAGGTATCAGAAAGTACAAATGTAATGTCTGTGAAAAATCGTTTGGTCAACAATCTCATTTAGCTGCTCATATGGCAGTACATAGTAAAATTAGattcCATTGCCCCGGATGTAGTAAACCTTTCAATCGTCTGGATAATATGAAAATGCATACTAAACGATGCAAAACATTTTTGGCAAATCCAGATTTGAAAAGACTTTTAAATAGGAGAGAAAGGACTATATCGTTCGATGACGTAACAGAATTAACTGCAAAACTAAAGACTGGAAATATCACAAATTCCGTGTCTTCAGTTTCTCTACAAAATCAGAATGGTGATATATCAGTAAAGACTGAGAAAGAGACTGCGTTAAATCTTTGCAAATTAGAAcagaatatttctttgattGACTCGACAGATAAAACATGTAATTCtgataagaaatataatgGAAAAGAAGTAACGAAATCTGCCAATATTAATGTagttaaaattgcaaatactAATGACagattaatttcagaaaacgaaaatttgtcagtttttgaaaatatattgagACCGGAAAACTATTAA
Protein Sequence: MELGKDEAQICRLCGQYESIYIDVFGEEGTKRFLGLKIHTKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRDRYNLPPLTEIAEVKTEDTPSAPSTSTNDSNNETNNNLNSSTDESIKEAEQRVLRTATKAQRNLRSQQQVRGNEEGANDQNSVQSTTEDNIENVQIVQNSETTPTRWLRSRQNTETIVINDATIDIPIANRLRSHDNTATEITVSPCNNSNENGDKLIGKQQDPHTIQIPTSALNKLLSIVSNSPNIEVSVKESRNQASDIEDISFTVELCKKESDDVATVRARVFPDQGSCLVDKAIVGLLQNQSCVEVNSIINTIINSSLKNGSSTKLRDSAEFEQKWQASQNPEELFRIDGEEIRVDDNVEHIVTDNQNGYSCKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYSCTDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPYRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLSVLNEHIKTRHATTYTCEICSKTFKVASKYKAHVLQHSNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHICQKCGARFAQASHLAAHRHVHGEKKHACPECGRKFNRRDNMKVKENDGLPQIVCMRCLGTLEFLCDFYERCHLVQKGFSKASQNTRDEKFQEDSDVESDKENTVPSRNETKWKVKVSSSDKLKSTKNCLPEDNTYKTEREKESVNLVDNNSSTNNYSVTQTTVQLSNVTSYKKFPGNDQRNVSSLKHRNLKNNIVKKSAIRTKLTNGLSQKDEDIDIKSDQSARRKRGRKSKFEKMRGTIRNDCFFKVRCETDFSLTNRSDNIDNNRRNKNLNNEREKSSLPVICDNDNSNRVINNVMTLPSQIDVEQVIDTPLISIDFTKSNEADIVIDKSPEIESNDESMKKIGNCLNNTEDCSVKSKAKSASFLKQSKNLTRNQSLLAEESKKTEDSETNLITVPDNNFDIEIISVNNQQSEIFTEQNRMTIIKSSSNKVSNPKTIEQDCTEVCIGIDIIDESIKNKECNVFNEHSLSRDNENSFSGTQSKNRPFGKISKLISDEQKQIIETYYVVNMSAINSEEVQRNITVVDKKNIRCNICGSLYLRMDKCQVHIWGHLQMKPYQCKACDFATVTVSNVRCHIRKSHLKIKPFACHLCEKRYVTAVLLEEHINSHTGARPYKCELCDFAGSSRQMLSYHSATHKPLKDVSCKICGKEFYSKTRLRAHMIVHNKDKAVMCKLCSAYLSNAEALEMHHKNIHMQDYVCNVCGKRVKSRKALYNHQNVHAAAKYKCTLCPNVYKSSQILKEHLLKHEGIRKYKCNVCEKSFGQQSHLAAHMAVHSKIRFHCPGCSKPFNRLDNMKMHTKRCKTFLANPDLKRLLNRRERTISFDDVTELTAKLKTGNITNSVSSVSLQNQNGDISVKTEKETALNLCKLEQNISLIDSTDKTCNSDKKYNGKEVTKSANINVVKIANTNDRLISENENLSVFENILRPENY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00983124; iTF_00983733;
90% Identity: iTF_00983733;
80% Identity: -