Mpro031804.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- -
- Assembly
- GCA_964023965.1
- Location
- OZ030394.1:10809987-10812939[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 7.8 7.8e+02 2.5 2.5 1 23 139 161 139 161 0.95 2 19 0.32 32 6.9 0.5 1 23 166 188 166 188 0.88 3 19 5.2 5.3e+02 3.1 0.7 1 23 315 337 315 337 0.97 4 19 0.00019 0.019 17.0 0.7 1 23 439 461 439 461 0.98 5 19 0.09 9 8.6 0.5 1 23 476 498 476 498 0.95 6 19 0.098 9.8 8.5 0.7 2 23 507 528 506 528 0.90 7 19 0.058 5.8 9.2 0.1 2 21 560 579 559 580 0.94 8 19 8.5 8.5e+02 2.4 2.7 1 23 585 607 585 607 0.93 9 19 2.1 2.1e+02 4.3 0.3 2 23 615 636 614 636 0.92 10 19 1.6e-05 0.0016 20.4 2.0 2 23 643 664 642 664 0.96 11 19 5.6 5.6e+02 3.0 5.2 1 21 676 696 676 697 0.91 12 19 0.00013 0.013 17.6 0.3 2 23 703 724 703 724 0.98 13 19 0.67 67 5.9 2.2 1 23 732 754 732 754 0.98 14 19 0.42 42 6.5 3.0 3 23 762 783 761 783 0.97 15 19 0.046 4.6 9.5 0.3 2 21 785 804 784 805 0.95 16 19 0.0025 0.25 13.5 3.6 1 23 843 865 843 865 0.94 17 19 1.1 1.1e+02 5.2 4.1 2 23 872 893 871 893 0.92 18 19 0.13 13 8.1 0.0 1 20 895 914 895 916 0.95 19 19 0.019 1.9 10.8 0.5 2 21 937 956 936 957 0.92
Sequence Information
- Coding Sequence
- ATGCGAGAAATATGCCGTTTGTGTCTGAAATCCACAGGAACCTTCTACCAAAACTTAAACATCTACAAACAACTGATTCTCGCAACTATACCAGAAATTAATCTGAACTTAATCTCAACACCTTTGATCTGCGATAACTGTAGCAACACCCTTGAAAATGCTCACATGTTCAAGACTACGTGCTTAGATTCCGAAGatagaattttaaaattgttgcaaGGTAGAAACGGTGAAAATTGTACGTTGGACGATATATTGAATAAACCGGCTGTTGTGATAAAACAAGAAACCGTATGCGGATATATAGAAAATGAGGTGCTGCAAGCTGAAATTGATCCTTTAGCTGACGTTGAAAATATACCGAAGATACCTGCGCAAATAAGTAAGCCTACGAGTACAACTATAACTAAAAACTTTCATTGCTCTGTGTGCAATATAGACTTTCTGTTGGAAACAAACTTTCATATACATCTACGTGGACATGCAGGAAAAGCCTTCAATTGCATTGTGTGTTATAAAGGATTTGATAATGAAAATGACTTAACGAAACATAGCAGCGAGCACTTGACAAAAAATTCAGACACGATAAGTACGGAGGAGGCAACAACATTTTCACATACAAGAAAAAGTACGAAAAGGACAAAAAATAACAGAAGAAGACCAAATACAAAGAGGAGACGTGTGCAAAATGGGGTACTTAAAACGCAAGTTAAAAATCTTGGTATTGgtaaagaaattattatcagGGAAAGCGTCAATAAAAGAAGTTTGCGTCCTCGTTCAGTCCTTCAAAGCCCAATGCTAGAAAACACAGATGAAGATGAATATCTAGATAATGAAGGAAAACAACAAATTCTCAATTTCCTTCAAAATCAGAGTGAATCAGAATCAGAGCAACCTgcgattaaaataattattccaGAGACTGATCAAAAACAGCTTTTTAAATGTGCTCTTTGTTATGTCAAAAGGAATACTGAGAAAGAAATTACAGAACACATAAAACAGCATAAACCCGGATATAGAAAACAATGTGAAATCTGCGGAGATCTATTTGAAAATATGGAAGGACTTTATGATCACTCGTACAGACAACATATGCCAACGCTATGTCTAGTAAAAGTATCCGATGAGTATACAACGCCCCAGAAAACAAACCAAGAACTTAAAAATACCGGAAGAACAGCAAAACAGAAAGGAAATAAACCTAGGGGAAGACCACCTAAAATCAAAAGACTACCGAAACCAGAtgatttcgacaaattagttgaTATTTTATGCGAAGAATTGGATGATCTTACCACAAACTCGAGCTTCAATTGCGAGTTTTGCGAGAAAACCTTTAAGATATACGAAGCTCTTCAAGAACATATGAAAGTACATTTTAAAGAACGGAACGTAGAGGAACAGGACGAAAATTCCTCGTTCTCATGTGATGTCTGCGGTGCCTCCTTCCATACTATGGTCCTACGGGATAAGCACATGCTCGCGCACACATTGTACTATGCACGAAAATGTATTTGTAATTTCTGCCAGAAAAGATTTGCTGACCCAGTTGTATATCAGTCTCACGTAGTTCTACACAGTAATGCCACCGATATATTTTGCAGCGATTGTCCATTACGTTTCCTAAGTCACACTCATTACTCCTCGcataaaaaataccaacacGGTACATACTGCGATGGTTGCAGAACAACGTTTAATAACGGAGATGCATTGTCACAACACGTTCGGCAATGCAATAGAAAATTTTTTTGCAAGTATTGCGATTTCGAAGCTAAGTCCAAGCAATCCCATCAAGGCCATATGCTTATTCATGGGTTACCAACTGAAGTAACGTCTTGTGTGATATGCGACTATAAATCGTTGAATACAGTCGAGCTGGTAAAACATATCAAGCAACACAACGAATTTGACGATGTAACGTGTCAACATTGCGATAAGAGTTTTATCTCGCAAAATGAACTCAGAAACCATCAGATAAACCATAGCGTTCTGGATAACTCAGGTCAAGAAACAATTTTTAAGTGCAAGCATTGCCATGTACAATTCCATACTGAGCTTAAGATGAACGAGCACAAGAGAAACTGTGCACGTAAACCCACTTGCGGCATATGCGGTAAGAAATACGAGAATAATGGGAGattatcaatgcatatgcgtgTGCATAATAAACCCCAACCACCGAGATTCAAATGCTATTTATGCGATCAAATCCACATTACAAAACTTCTTTTAACGGAACACATGAAAAATCATGATGACGTCACGGATATACTGTGCGACTACTGCCAATTGCGTTTCTGCGAAGAATCCGCTTATTGCGAACATGTTCAAAAACTACACACAACGTGCAGTAATTGTAACACTTTGTTTGGTGACTCTCGCACCTTGAACGAACATATGCAATTATGCCCAAAACTAAACATGGTCGAATGTGCCCACTGCAAATATAAATCCATCACCTTCGTAGATCACAAACGGCATATCACAAGCGAACATCCCTCCACGATAGAGCGGAAATATCATTGCAGTCTTTGCGATACACGGTTTCGAAGTAAACGAGATCTAACGTGGCATTTCGACCAACATGACATAGTCAAAGATATTCGTTGCGACTATTGCCATATGAGATTTGTTTCTGCCGATCATCACTATCAGCATCTTGCTAATCATACATATAAGTGTCAGTTCTGCGAAGTTATGGTAGAGTCCAAAGATGCTTTAACAGAGCATATTGTTAAATGTAAGAAGAATCCTGATTATATTGAGGAGATTATTGTGTATGGAGCGGAGGGAAAGCTTACCTGTACTCATTGTAATGAAGTTTTTGGTAGCATGGTGCAGCTAAAAGATCATTTTAAGATGGTTgtattactttaa
- Protein Sequence
- MREICRLCLKSTGTFYQNLNIYKQLILATIPEINLNLISTPLICDNCSNTLENAHMFKTTCLDSEDRILKLLQGRNGENCTLDDILNKPAVVIKQETVCGYIENEVLQAEIDPLADVENIPKIPAQISKPTSTTITKNFHCSVCNIDFLLETNFHIHLRGHAGKAFNCIVCYKGFDNENDLTKHSSEHLTKNSDTISTEEATTFSHTRKSTKRTKNNRRRPNTKRRRVQNGVLKTQVKNLGIGKEIIIRESVNKRSLRPRSVLQSPMLENTDEDEYLDNEGKQQILNFLQNQSESESEQPAIKIIIPETDQKQLFKCALCYVKRNTEKEITEHIKQHKPGYRKQCEICGDLFENMEGLYDHSYRQHMPTLCLVKVSDEYTTPQKTNQELKNTGRTAKQKGNKPRGRPPKIKRLPKPDDFDKLVDILCEELDDLTTNSSFNCEFCEKTFKIYEALQEHMKVHFKERNVEEQDENSSFSCDVCGASFHTMVLRDKHMLAHTLYYARKCICNFCQKRFADPVVYQSHVVLHSNATDIFCSDCPLRFLSHTHYSSHKKYQHGTYCDGCRTTFNNGDALSQHVRQCNRKFFCKYCDFEAKSKQSHQGHMLIHGLPTEVTSCVICDYKSLNTVELVKHIKQHNEFDDVTCQHCDKSFISQNELRNHQINHSVLDNSGQETIFKCKHCHVQFHTELKMNEHKRNCARKPTCGICGKKYENNGRLSMHMRVHNKPQPPRFKCYLCDQIHITKLLLTEHMKNHDDVTDILCDYCQLRFCEESAYCEHVQKLHTTCSNCNTLFGDSRTLNEHMQLCPKLNMVECAHCKYKSITFVDHKRHITSEHPSTIERKYHCSLCDTRFRSKRDLTWHFDQHDIVKDIRCDYCHMRFVSADHHYQHLANHTYKCQFCEVMVESKDALTEHIVKCKKNPDYIEEIIVYGAEGKLTCTHCNEVFGSMVQLKDHFKMVVLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00138520;
- 90% Identity
- -
- 80% Identity
- -