Basic Information

Insect: Melinopterus prodromus
Gene Symbol: RREB1
Assembly: GCA_964023965.1
Location: OZ030391.1:2748153-2753044[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0026 0.26 13.4 0.7 1 23 78 100 78 100 0.97

2 15 0.00053 0.053 15.6 0.7 1 23 113 135 113 135 0.97

3 15 8.2e-06 0.00082 21.3 2.8 1 23 141 163 141 163 0.98

4 15 2.4 2.4e+02 4.1 0.4 1 23 233 257 233 257 0.88

5 15 0.002 0.2 13.8 2.7 2 23 263 285 263 285 0.97

6 15 0.94 94 5.4 0.4 1 19 333 351 333 354 0.86

7 15 0.14 14 8.0 0.1 1 23 472 494 472 494 0.96

8 15 1.4e-05 0.0014 20.6 0.3 1 23 503 525 503 525 0.99

9 15 0.0033 0.33 13.1 3.6 1 23 531 554 531 554 0.97

10 15 0.0016 0.16 14.2 2.1 1 23 889 912 889 912 0.95

11 15 0.00035 0.035 16.2 0.4 2 23 1115 1136 1114 1136 0.97

12 15 0.21 21 7.5 6.8 1 23 1142 1165 1142 1165 0.97

13 15 0.0079 0.79 11.9 2.4 1 23 1193 1217 1193 1217 0.94

14 15 0.031 3.1 10.0 0.4 3 23 1328 1348 1326 1348 0.93

15 15 3.3 3.3e+02 3.7 8.3 1 23 1354 1376 1354 1376 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0026	0.26	13.4	0.7	1	23	78	100	78	100	0.97
2	15	0.00053	0.053	15.6	0.7	1	23	113	135	113	135	0.97
3	15	8.2e-06	0.00082	21.3	2.8	1	23	141	163	141	163	0.98
4	15	2.4	2.4e+02	4.1	0.4	1	23	233	257	233	257	0.88
5	15	0.002	0.2	13.8	2.7	2	23	263	285	263	285	0.97
6	15	0.94	94	5.4	0.4	1	19	333	351	333	354	0.86
7	15	0.14	14	8.0	0.1	1	23	472	494	472	494	0.96
8	15	1.4e-05	0.0014	20.6	0.3	1	23	503	525	503	525	0.99
9	15	0.0033	0.33	13.1	3.6	1	23	531	554	531	554	0.97
10	15	0.0016	0.16	14.2	2.1	1	23	889	912	889	912	0.95
11	15	0.00035	0.035	16.2	0.4	2	23	1115	1136	1114	1136	0.97
12	15	0.21	21	7.5	6.8	1	23	1142	1165	1142	1165	0.97
13	15	0.0079	0.79	11.9	2.4	1	23	1193	1217	1193	1217	0.94
14	15	0.031	3.1	10.0	0.4	3	23	1328	1348	1326	1348	0.93
15	15	3.3	3.3e+02	3.7	8.3	1	23	1354	1376	1354	1376	0.98

Sequence Information

Coding Sequence: ATGCAAGGAAACATCTGTATGGCTCTAAACATCGAAGCAGGATCATCGCCACCACATCAGAAGATTTCAGATGCCAATGGAACAATGGACCTAACCACCAACGAATCCAAAACCAAAGAAAACAACCAAAGCATTCGAACCGATTCCGGCTTCCTATCGGCCTCGAACTACACAGCCGATCACCAGAGCGATTCCGACAACAGGAGCGACTGCAGTTCGCCCGAGAAGAAACACCCCTGCCCGATCTGCGACAGCATGCTGACGGGCCAGCACGAGTTAACGCTGCACATCCGTAGTCATAACAACGACAATGAAACTCAACCATCCGACAAAGGGTTCATATGCAAGATTTGCGAGAAAGTCCTGTGCTCGAGTTCTAGTCTTGACAGGCATGTGTTGGTCCATAGCGGGGAACGTCCGTTTTCTTGCTCAGTTTGCGGGGTCACCTTCACTACCAATGGCAACATGCATCGACACATGAAGAAACACCCGCATTTGAAGAACGGGTACGACTCTGACAGCTGTGGCAGCTCAGACAGCAGCGGGAGCAGCTCCAAGAAGGTCGAATACAACAACAACCAGATCGATGGGGTTAACGCGATAACCAAGCATACTGGGGTGAAGCGAAAGCTGGAAGACGAGCTTACCCATGAGGAGTTTAAGAATGGGAGGATTAAGCTGGAGTCAGTTGAGCATTACAAATGCCAGCTTTGCGACAGGGAGGACTTCTCTAGTATTGAAAGCTACAAGCTCCATCTAGCTGAGAACCACCCGGAACATCCAGCGGAGTGTTCACAATGCAAACAAAGCTTCTCGAACCACAAGGCTTTGAATCTCCATACGAACACCGTTCACGCTGACCAGAACGGGAAGCTGAAGACCTTCATCCATGGGTTTAAGGATTGCACCTCAGTGGACTTCTCCTGTGAGAAGTTTCCGCACATAGCCAAGAGTAAATGCGAGGAGTTCATCCACAAACCGGCGTCTGAGATCAAATTCCAATGCCGGGAGTGCCCGAGGGCCTTTCCTTGCTCCATCTCCTTGGAGATGCACGAGAAAGACTGCATGCTCGGAGTTACGCATACAATCCCCCCGAAGTACGACACCACCTTCATAAAAAGGAAGGAATTCTTCAACATACTCGACCTGCAGGATAACTCACTCGATAGGACGCCAATCATTTCAAAAGCTATCCTCCAAAACGCATTAAGACCGAGTTTTGACCACACCACCAAAGACCTGGCTGATATCCCAACCATCCTCTCGTCGATGGCTGCGAACGGTGGCTTCATGCAACACCTATCCAAGAACGAACCCCACCACCACGAACAACAACTAGAAAACAAAACAGACGAAGAGGAAGCCCAAGATATCTTCGCTATTGAGTTCAGGAAGATGAAACTCCGTGGTGAGTTCCCATGCCGCCTCTGCACCGCTGTTTTTCCCAACCTGCGCGCCCTGAAGGGGCATAACAGGGCCCACCTGAACGGCAGCAACAACGGTACTTACCAATGCAACATGTGTCCATACGCTTCTCAAGATAAATCGGCGCTCGTGCGTCATATGAGGACACACAACGGAGATCGGCCATACGAATGCTCGTTGTGCAAGTACGCCTTCACCACGAAAGCGAACTGCGAGAGACACCTGCGCAATAGGCACAACAAGAACACCAGGGACGAAGTTAAGAACTCGATCATCTACCATCCGTCGGAAGACCCCACGAATGACGATTTGAACAAACTAGCTAGAGATGACACCAAAAAGATGAATAATAGTTTTACTTCGAATGCTGATAGTGATGTTACGCAAGACACTATGAGGAGCACGACGCCAAAGAGTTGCCTAAGCGAGCATTTCGTTCGGAGGAGCGAACCGTTGCTCCAGCTGCCTAACCCGCTGCCTTGGGTCGGACAACCGACTGCGCCATATCGCAGCATCAACGAGATTATCACCGGGGAGAACCTGAAGACCCTCAGCGAGATCCCTGCGTTACAGAGCAGGTTCGCCTTCAACCCTACTATTACGAATACCTCCACCCCGCAGAAGCCAAAGATCCACGTGAAGACTTTAGATACCCTCAAGCAGATACCCGAGTACGATAGCGACCCCGATTACGATAAACCTATCGATTTGAGCAAGAAGAAGGCGGAGTATTCGGATGAACGGTCGGATTCCGAAGAGGAAGAGGAACAAGAATCGCCCGAAGATCTAACCAGGAAAGTTCAAGAAGCTCCACAGTTCAACAACATCCTAGCGGCGCAGCAGATCATCAAAAACCACCAACTAGCGATGCTCCAGAGTTTCCCCCATTGGCCGCACCCGTTCCCCCCGCAGTTCCTCTTTCCTCTCCTCCAAGACCCCGAGAGATTCAATCGTCCAACTCCTAATCCCATGCTTACCGAGAATCGCGGCTTCCCAACGTTACCACAACCGATGTTTCCAACGTTCCCTTCGCCTAAATCCGCTGAGGACATCAAACCATTGTCGGTAAACATCGACCCGACATTCGCGGAGAACATCTCGAAGATGCAGAGCCCCATCCAGCCTCAACCACCGAAATCGGAATCAGTTTTGCATTCGCCGAATTCGGTCAAAATGGTGATCAAGAATGGCGTGCTTATGCCAAAACAGAAGCAAAGACGTTACCGAACGGAGCGGCCGTTTGCTTGTGAGCACTGCTCTGCTAGATTCACCCTAAGGTCTAACATGGAACGTCACATCAAGCAGCAACATCCTCAATATTATTCCCAAAGGCAACGCTCGAATTCAAACGCTGGTAGGAAGGCGGTTAACGGCGTTGCGGCTAATCTGACGGTACCAACGTATGAACCCCAGAGGAGCCCTGAAGATGACACCAAAAACCAGATTTCCGATGAGTTGAAGTATGCTATCTTGGCGCAGCATCTTAGAGCTAACCAAGATTACAAACACTCCCTGACTCAAGTGAAGAAAGAGGAAGATGATGAGTGTGCTTTGGTCATTGACGAGCATGAGGAGAAGATGGATACTGATGAGGACTTTGAGAGGAGACGGATGCTGGAGGATAAGTTGAAGGAACTCAAGGAGAAGAAGGCTAGGAGCGAGGAGGTCCAGGACCTTGTTCCCGTCTCGAGGCTTTTGGATAATGCCTCCCAGCAACCTTTCAAAGAGTATTTCAAGAACGAGAGGGACGACCATGAGCAAGACGAAGACGAAGAGGAAGACGAAGAAGGATTGGTGGCCAGTGGGAGTACCAGTGAGGCCAACTCCGGTTCTGATGACAAATCTGAATCGGAGAACCCAAACAGCACACGCCCCGTCAAGAAGAAGTCAGCATACTCCTTAGCACCGAACCGCGTCAGCTGTCCGTACTGCAACCGGAAGTTCCCCTGGACTTCCTCCTTGCGACGCCACATCCTCACCCACACCGGTCAGAAACCGTTCAAGTGCAGCCATTGTCCATTACTCTTCACCACGAAGTCCAACTGCGACCGTCACCTGCAGAGGAAGCACGACAGCGCTGCTTCGACAATCCCAAACGATTCCGGCAACAACAACGCGAGCTTCCTCATGAGGAACGTCCCGGAACGGCCTTACAAATGCTCCACGTGCCCTAGCAGCACGTTTTCCACAGCTTCCAACCTGAAGAAGCACATCCATGGGAAGCACAACGATGGTAAGATGCAGGGTTACGACGCAGGGAGTTCCGAAGACGAGAAGCATGAGTGGGAGGGGCAAGCAAGCCAGAAATTAGGTCAGGAGCAACTGAATTCTTCGGATCTGCCCTTCAAGTGTCATCTTTGCGAAGGGTCGTTCAGTGAGAGGAACGATTGCTTGGACCATATCAAGGATAAACATCCCTCGGAATATGAGTTGTTAATGTCGAAAAACGCTTTGGATAGTAACGCTTCTCCACCTGAGGATTCCTCGAACAACCACGATGAGGAAGACATCGAAATCCGCGGTAAATTTCCGGATTATTCCAACAGGAAGGTGATCTGTGCCTTCTGCATGAGACGATTCTGGTCTGCTGAGGACTTGCGAAGACATATGCGCACCCACACGGGTGAGCGTCCGTTCAGCTGCGACATCTGTTGCAGGAAATTCACGCTAAAACATAGTATGCTCCGCCATAGGAAGAAGCATAACTTTATGGAGGGGGGTGATGCGGCGAATAGTGATGAAGATATCGTCAATCCGTTGGAGAAGTGTAAAGTTTCAGAGAAACCTGATGAGTCTGACGGTATAGAAAGTGGAGACCTCATCAGTAACTTGTTGGGAATCCAAGGTTCAATTGTGGACCAGATCATAACCTCAACTCCCGATGATGCTGCTAAGCTTCTGGGGGTGAGGAACGGCAACCCGgagtaa
Protein Sequence: MQGNICMALNIEAGSSPPHQKISDANGTMDLTTNESKTKENNQSIRTDSGFLSASNYTADHQSDSDNRSDCSSPEKKHPCPICDSMLTGQHELTLHIRSHNNDNETQPSDKGFICKICEKVLCSSSSLDRHVLVHSGERPFSCSVCGVTFTTNGNMHRHMKKHPHLKNGYDSDSCGSSDSSGSSSKKVEYNNNQIDGVNAITKHTGVKRKLEDELTHEEFKNGRIKLESVEHYKCQLCDREDFSSIESYKLHLAENHPEHPAECSQCKQSFSNHKALNLHTNTVHADQNGKLKTFIHGFKDCTSVDFSCEKFPHIAKSKCEEFIHKPASEIKFQCRECPRAFPCSISLEMHEKDCMLGVTHTIPPKYDTTFIKRKEFFNILDLQDNSLDRTPIISKAILQNALRPSFDHTTKDLADIPTILSSMAANGGFMQHLSKNEPHHHEQQLENKTDEEEAQDIFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGSNNGTYQCNMCPYASQDKSALVRHMRTHNGDRPYECSLCKYAFTTKANCERHLRNRHNKNTRDEVKNSIIYHPSEDPTNDDLNKLARDDTKKMNNSFTSNADSDVTQDTMRSTTPKSCLSEHFVRRSEPLLQLPNPLPWVGQPTAPYRSINEIITGENLKTLSEIPALQSRFAFNPTITNTSTPQKPKIHVKTLDTLKQIPEYDSDPDYDKPIDLSKKKAEYSDERSDSEEEEEQESPEDLTRKVQEAPQFNNILAAQQIIKNHQLAMLQSFPHWPHPFPPQFLFPLLQDPERFNRPTPNPMLTENRGFPTLPQPMFPTFPSPKSAEDIKPLSVNIDPTFAENISKMQSPIQPQPPKSESVLHSPNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYYSQRQRSNSNAGRKAVNGVAANLTVPTYEPQRSPEDDTKNQISDELKYAILAQHLRANQDYKHSLTQVKKEEDDECALVIDEHEEKMDTDEDFERRRMLEDKLKELKEKKARSEEVQDLVPVSRLLDNASQQPFKEYFKNERDDHEQDEDEEEDEEGLVASGSTSEANSGSDDKSESENPNSTRPVKKKSAYSLAPNRVSCPYCNRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLQRKHDSAASTIPNDSGNNNASFLMRNVPERPYKCSTCPSSTFSTASNLKKHIHGKHNDGKMQGYDAGSSEDEKHEWEGQASQKLGQEQLNSSDLPFKCHLCEGSFSERNDCLDHIKDKHPSEYELLMSKNALDSNASPPEDSSNNHDEEDIEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRKFTLKHSMLRHRKKHNFMEGGDAANSDEDIVNPLEKCKVSEKPDESDGIESGDLISNLLGIQGSIVDQIITSTPDDAAKLLGVRNGNPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00138456;
90% Identity: iTF_00138456;
80% Identity: -