Basic Information

Insect: Melinopterus prodromus
Gene Symbol: -
Assembly: GCA_964023965.1
Location: OZ030394.1:12329196-12332123[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1e-07 1e-05 27.3 1.3 1 23 279 301 279 301 0.99

2 12 5.3e-06 0.00053 21.9 7.2 1 23 307 329 307 329 0.98

3 12 7.7e-06 0.00078 21.4 0.8 1 23 335 357 335 357 0.99

4 12 0.098 9.8 8.5 3.4 1 23 363 385 363 385 0.94

5 12 0.0011 0.11 14.7 0.8 3 23 393 413 391 413 0.98

6 12 3.4e-08 3.4e-06 28.8 2.6 1 23 419 441 419 441 0.98

7 12 3.1e-06 0.00031 22.6 1.4 2 23 447 468 446 468 0.97

8 12 1.2e-05 0.0012 20.8 1.9 1 23 474 496 474 496 0.99

9 12 1.6e-05 0.0016 20.4 3.6 1 23 501 523 501 523 0.98

10 12 3.6e-06 0.00036 22.5 4.1 2 23 530 551 529 551 0.98

11 12 4.3e-07 4.3e-05 25.4 1.9 1 23 557 579 557 579 0.98

12 12 0.00038 0.038 16.1 5.8 1 23 585 607 585 607 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1e-07	1e-05	27.3	1.3	1	23	279	301	279	301	0.99
2	12	5.3e-06	0.00053	21.9	7.2	1	23	307	329	307	329	0.98
3	12	7.7e-06	0.00078	21.4	0.8	1	23	335	357	335	357	0.99
4	12	0.098	9.8	8.5	3.4	1	23	363	385	363	385	0.94
5	12	0.0011	0.11	14.7	0.8	3	23	393	413	391	413	0.98
6	12	3.4e-08	3.4e-06	28.8	2.6	1	23	419	441	419	441	0.98
7	12	3.1e-06	0.00031	22.6	1.4	2	23	447	468	446	468	0.97
8	12	1.2e-05	0.0012	20.8	1.9	1	23	474	496	474	496	0.99
9	12	1.6e-05	0.0016	20.4	3.6	1	23	501	523	501	523	0.98
10	12	3.6e-06	0.00036	22.5	4.1	2	23	530	551	529	551	0.98
11	12	4.3e-07	4.3e-05	25.4	1.9	1	23	557	579	557	579	0.98
12	12	0.00038	0.038	16.1	5.8	1	23	585	607	585	607	0.97

Sequence Information

Coding Sequence: ATGTCAAACCAAGTCGTTTTTCATGAGCGCACAAGTCCAAATGGGCTTGCAATGGAGAATATCTTTCACGTGGCCGATTGCTGTCGAGCCTGTTTACGAATTGAATGTTCCCTGACCCCCATAAGCTCACCTGACAGCGATACGATAAAATTCTGCGACAAACTAGAAGCTTGCGTCTCAGAAATAATGTGGTTAAAAGAAGGTTTACCATCCGTAATATGCTCGACATGCATAGACAGACTACGACTGGCTTACGATTTTCGAAACGTTTGTTTACAGTCCAATCAAACTTTAATGCGTTTAACGCAAATGCAAGATGAAGGGAAAACGGAACATTTTATAGTCACTAGTAGGCCTTTGAATACACCTACGAAGTTTGAATTTAGTATTCCGCAAACTACACCGGAGTTGCCTAGTATTATTGAGGCCCAAAATCCTGAGGAATATTTGCATTTAAAGCATTTCTTGGATAACGATGAGGAATTAACGAAGAACGAGGTACTGGGCGATGTTGGTACCCCGCGTAGTGTCACTCCGGAATCGCACAAAACCGAACATTTTAGTACAGAGGCACGGGTGCATCCTGTTATAACGCAAGTACAACATCAGCAGATACAAACGAATGAGTTGCAAGAAACTACGCagTTTAGTCTAGAGAATAAGAAGAAAACTAAAATCGAATATTTTCTCCAGACATATCAACCACCGGAACAACTACATCCAACCATAATCCAAGTCCAAGCGCCCCGCCAGGTCATCAAACGCACGACCGGCATTCAAGTACGCCCCCTGACGCCGACGTCTGCCGACGTAGCCTCCGTCGAACTCAAACCGTTCACCTGTACGGTCTGCGGGAAAAACTACCGAAAAAACGCGAATCTCCGTATCCACATGCGCACCCACACCGGCGAGAAACCGTTCGAGTGCAAGTACTGCGAGAAACGGTTTTATCATTCCTCGCACTTACGAGAACACATCCGCCGACACACCGGTGAGAAACCCTTCCAATGCGCCGTCTGCAACAAACGCTTTACGATAAAAGGCGAGCTAACGATGCACATGAAATCCCACACAGGCGAGAAGCCTTTCGCGTGCACTTGTTGCGATCGACGCTGTTTAACCGCAGCTGATTTAAAGGTACACATGCGGACGCATACTGGCGAGAGACCTTTCGGTTGTACGACCTGCGGGAAAAAATTTGCGTCCACGTATATCTTGAATTCACATATAAAAACGCACACGGGCGAACGTCCTTATTCCTGCGCCGTTTGCGATAAAACCTTCACGCAGTCGTCGCATTTAAACGTTCACATGCGGAAACACACCGGCGAAAAAGTTTCCTGTAAAGTCTGCGATGCAAAATTCACGCATTCCTCCCAATTAACAGTTCACATGCGGGAACACACTGGGAAGCAACCGTACCGTTGTAATATCTGCGAGAAAGTCTGTAATTACGCGTCGGAACTTCAAACGCACCTGATGAAACATACCGGGGAAAAATTTTCGTGTTCCACTTGCGACAAGAAGTTTACGACGGCTGCGTATCTGCACGAGCATACGCGGACTCATACGGGGGAAAATCTGTCGACGTGTACGATTTGCGATAGGCAGTTTACGCGGCATCAGTATCTGGAGAAGCATATGCGTACCCATACTGGCGAAAAGCCGTTTCAGTGTTACTCGTGCGGGAAGAAGTTTACGCAGAGTTCGTCGTTGAAGGTGCATCTGCGTATTCATACGGGAGAGCGGCCGTATTGCTGTACGCTCTGCAACCGGAGGTTTACGACATCTTCGGATCTGTCCCAGCATAATAAGAAGCATAATAGTAAAAAGATGTACGTCGATTTGTAA
Protein Sequence: MSNQVVFHERTSPNGLAMENIFHVADCCRACLRIECSLTPISSPDSDTIKFCDKLEACVSEIMWLKEGLPSVICSTCIDRLRLAYDFRNVCLQSNQTLMRLTQMQDEGKTEHFIVTSRPLNTPTKFEFSIPQTTPELPSIIEAQNPEEYLHLKHFLDNDEELTKNEVLGDVGTPRSVTPESHKTEHFSTEARVHPVITQVQHQQIQTNELQETTQFSLENKKKTKIEYFLQTYQPPEQLHPTIIQVQAPRQVIKRTTGIQVRPLTPTSADVASVELKPFTCTVCGKNYRKNANLRIHMRTHTGEKPFECKYCEKRFYHSSHLREHIRRHTGEKPFQCAVCNKRFTIKGELTMHMKSHTGEKPFACTCCDRRCLTAADLKVHMRTHTGERPFGCTTCGKKFASTYILNSHIKTHTGERPYSCAVCDKTFTQSSHLNVHMRKHTGEKVSCKVCDAKFTHSSQLTVHMREHTGKQPYRCNICEKVCNYASELQTHLMKHTGEKFSCSTCDKKFTTAAYLHEHTRTHTGENLSTCTICDRQFTRHQYLEKHMRTHTGEKPFQCYSCGKKFTQSSSLKVHLRIHTGERPYCCTLCNRRFTTSSDLSQHNKKHNSKKMYVDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00137213;
90% Identity: iTF_00138325;
80% Identity: -