Basic Information

Insect: Melinopterus prodromus
Gene Symbol: -
Assembly: GCA_964023965.1
Location: OZ030396.1:46734006-46736997[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0024 0.24 13.6 5.4 1 23 155 177 155 177 0.98

2 16 0.064 6.4 9.1 2.3 1 23 183 205 183 205 0.97

3 16 5.4e-05 0.0054 18.8 2.8 1 23 211 233 211 233 0.98

4 16 0.00038 0.038 16.1 1.7 1 23 239 261 239 261 0.98

5 16 2.3e-05 0.0023 19.9 3.8 3 23 269 289 267 289 0.98

6 16 3.7e-05 0.0037 19.3 2.2 1 23 295 317 295 317 0.98

7 16 1.4e-06 0.00014 23.7 0.4 1 23 323 345 323 345 0.99

8 16 2.3e-05 0.0023 19.9 0.4 1 23 351 373 351 373 0.98

9 16 0.00032 0.032 16.3 1.4 1 23 379 401 379 401 0.97

10 16 3.9e-06 0.00039 22.3 1.5 1 23 407 429 407 429 0.99

11 16 4.1e-08 4.2e-06 28.5 0.2 1 23 435 457 435 457 0.98

12 16 0.0004 0.04 16.0 4.9 1 21 463 483 463 485 0.94

13 16 1.2e-05 0.0012 20.8 0.1 1 23 491 513 491 513 0.99

14 16 1.6e-07 1.6e-05 26.7 3.4 1 23 519 541 519 541 0.98

15 16 0.0051 0.51 12.5 1.7 1 23 547 569 547 569 0.98

16 16 4.4e-05 0.0044 19.0 3.6 1 23 575 597 575 597 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0024	0.24	13.6	5.4	1	23	155	177	155	177	0.98
2	16	0.064	6.4	9.1	2.3	1	23	183	205	183	205	0.97
3	16	5.4e-05	0.0054	18.8	2.8	1	23	211	233	211	233	0.98
4	16	0.00038	0.038	16.1	1.7	1	23	239	261	239	261	0.98
5	16	2.3e-05	0.0023	19.9	3.8	3	23	269	289	267	289	0.98
6	16	3.7e-05	0.0037	19.3	2.2	1	23	295	317	295	317	0.98
7	16	1.4e-06	0.00014	23.7	0.4	1	23	323	345	323	345	0.99
8	16	2.3e-05	0.0023	19.9	0.4	1	23	351	373	351	373	0.98
9	16	0.00032	0.032	16.3	1.4	1	23	379	401	379	401	0.97
10	16	3.9e-06	0.00039	22.3	1.5	1	23	407	429	407	429	0.99
11	16	4.1e-08	4.2e-06	28.5	0.2	1	23	435	457	435	457	0.98
12	16	0.0004	0.04	16.0	4.9	1	21	463	483	463	485	0.94
13	16	1.2e-05	0.0012	20.8	0.1	1	23	491	513	491	513	0.99
14	16	1.6e-07	1.6e-05	26.7	3.4	1	23	519	541	519	541	0.98
15	16	0.0051	0.51	12.5	1.7	1	23	547	569	547	569	0.98
16	16	4.4e-05	0.0044	19.0	3.6	1	23	575	597	575	597	0.98

Sequence Information

Coding Sequence: ATGGAGACGgttataaataacataaaaattgaaCCGGAACAAGATTTTTATGGGTATAATGATGTAAAACAAGAATACTACAACCCTTATAGTTACTACAATCATTTCTACGAACAAAACAAACGTATCGATTACAATTTTAGCGACAAAATGGGTTTAAATCCGCTGTATTACGATTATAACAGGCAGTTTCAATATTCGCAACCGATTTCGAATTTTTCATCGAATATACACCAAAATTATGGAACAGAATTCGAATGTAAATATATTAAAGAGGAAAAAGAACAGCCGGACGATTTTTTTGTTCCTAAAAAGGTGGTAGAACCACAAAACTTACAAGAGAATTCTGATGATTACAGGGATCATGTCACCTCTGTATTCCTTGACAAGTTTAATGTTTCACATCATTTCATGTgttcaaataaagaaattagcGAATCTGTGCAAGAATTGAGTAAAAAACACCAGTGCGACGTCTGTTCGAAGAGATTTAAGTGCAAATCTTACCTGATGGCGCATCAAAATGTTCATGCGGGTATTTTTCCGTTCAAATGTGGGATTTGCGATAAAACTTGTCTAACAAAGCAACAACTGGGGTATCACGAGAAGATCCACAGTGGGAATCGACCGTTTAAATGCGAAACGTGCCCGAAAACGTTCATGAGCCCGAAAGATTTACGACATCACAATCTCACCCATACCGGCGAAAAACCTTTCATCTGTGAGGTCTGCAATCACGGTTTTTCGCTAAAGAAGAATTACGAAACACACCTTCGGATTCATACGAAGGAAAAACCGTACGGTTGTAAGGATTGCGGGAAATTATTTAGTCGAATGGATCATTTAAAACATCACATTTTGACGCATACCGGCGAACGGCCGTTTAAATGCGAATTGTGCACGAAAACGTTTGCTAGGAAGTTTGTTTTGATGCTCCACATGCGGTACCACAACGGGGTAAAACCGTATACGTGCGACGTCTGTGGAAATGCTTTTGCGGAGAAGAATACTTTGACGAGGCATATGCGTACTCATACTGGCGAAAAGCCGTATCCGTGTGATCAGTGTGAGAAGTCTTTTGCTGGTCGAAAGGATTTGTTGAGTCACCTGAAGACGCATGTCGACGAGAAAGAGTTTGATTGTAAAGTTTGCTTGAAGAGTTTTAAGACGCGGCAGTATTTGTTATTGCATGTAAAGATCCACGAGGAGGATAAACATTATAGGTGCGATTTCTGCGGGAAGGGGTATAATACGAAGGAGAAATTGAAACTTCATATCAGATCTCACACGGGCGAGCGTCCGTTTCCCTGCAACATCTGCGATAAGGCGTTTATCACAAAAGGCGAGCTAAAACGTCACATCATGACGCACACCGGCGAGCGGCCCCACCAATGCACCGTATGCCCGAAATCGTTCATCTCGAAAGGGAAACTAAACCGACACACAAAATGCCATTCCTCCGACAAAGAATACAAATGCCTCGTCTGCGGAAAAGAATTCGCCGTCAGGGACGGCCTCGTAACGCACATGAAAATCCACAACAACGACAAGGCGTTCCCCTGCCACATGTGCGATAAACGATTCATCACCCCCGAGCATCTACGCAACCACATACGCACCCATACCGGCGAAAAGCCTTACGAGTGCCCTATCTGTCTTCGGAGATTTTCGTGCCGAGGAAATTTGAGCACGCACGTAAAATTGCATTCCGGTTTGAAGCCGCATAAGTGCGACGTTTGCGATACTTGTTTTGCGCAGAAGAGCGCGCTGTTGAACCACAAGAAGATACATAATCGGTTGGTAGCTAGCACGGATACGACGCCATCTGTTGAGGTACCCGTGAACGACGAGGTTAAAGTTACGGTTAAGGAGGAGTACGATGACGTTCCGAAAAATCCCGAGTCTTGTTTCGATGGTACGACGAATTTGGTCAAAGAGGAAGAGTCGCAGATATCGAATGTCAAACAGGAAGgcgatttttattattga
Protein Sequence: METVINNIKIEPEQDFYGYNDVKQEYYNPYSYYNHFYEQNKRIDYNFSDKMGLNPLYYDYNRQFQYSQPISNFSSNIHQNYGTEFECKYIKEEKEQPDDFFVPKKVVEPQNLQENSDDYRDHVTSVFLDKFNVSHHFMCSNKEISESVQELSKKHQCDVCSKRFKCKSYLMAHQNVHAGIFPFKCGICDKTCLTKQQLGYHEKIHSGNRPFKCETCPKTFMSPKDLRHHNLTHTGEKPFICEVCNHGFSLKKNYETHLRIHTKEKPYGCKDCGKLFSRMDHLKHHILTHTGERPFKCELCTKTFARKFVLMLHMRYHNGVKPYTCDVCGNAFAEKNTLTRHMRTHTGEKPYPCDQCEKSFAGRKDLLSHLKTHVDEKEFDCKVCLKSFKTRQYLLLHVKIHEEDKHYRCDFCGKGYNTKEKLKLHIRSHTGERPFPCNICDKAFITKGELKRHIMTHTGERPHQCTVCPKSFISKGKLNRHTKCHSSDKEYKCLVCGKEFAVRDGLVTHMKIHNNDKAFPCHMCDKRFITPEHLRNHIRTHTGEKPYECPICLRRFSCRGNLSTHVKLHSGLKPHKCDVCDTCFAQKSALLNHKKIHNRLVASTDTTPSVEVPVNDEVKVTVKEEYDDVPKNPESCFDGTTNLVKEEESQISNVKQEGDFYY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00138310;
90% Identity: iTF_00138310;
80% Identity: -