Mpro050397.1
Basic Information
- Insect
- Melinopterus prodromus
- Gene Symbol
- Hr39
- Assembly
- GCA_964023965.1
- Location
- OZ030398.1:3107027-3114670[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2 5.9e+04 -8.3 11.8 58 153 60 137 15 189 0.33 2 4 0.16 4.7e+03 -1.7 4.7 52 153 121 226 106 244 0.49 3 4 4.2e-09 0.00012 23.3 0.0 1 68 311 378 311 437 0.74 4 4 3.1e-72 9e-68 231.2 0.1 205 408 443 641 384 641 0.96
Sequence Information
- Coding Sequence
- ATGTTCGTTTTAGTTGACGTGGTCATATTGTCGGCGATATTTGTGCTTCCAGAGAACCTCTCCATCGCTCAAAACAAGCAACCGCAGACAAATGACGACTCCAAGGAGAGTCCAATACTGAGACTGAAGCACACCGTATCAACTTCGACGCAGCACGTCAGCAGCTATTCTCTTCATAGTACACCGAGCAATTCTCCATTATTAAGCCAGAGGCAGTATTCTACAACGTTGACGGGCGGTAGCGGTCTACCGTCTTCGATGATTGGCCATAAAGATCTCATGCATAAGGCGCTGAACGTCCCGCCTACTCCAAGTCCAGATTCGGCCATACACTCGGCGTATAGCGTCTTCAGCTCGCCGAATCAGAGTCCTCTGACGCAGAGGCACGTCACGCTGACGCCGAACCTCAGCAGGAACAACAGCGATGCATCACATTCGAGCTGTTACAGTTGTTCCAGTGTTTCTGTGTCCGTTTCGCCAACTCAACAGTTCTCGCCAACACATAGTCCGATACAGGGTAGACATCATGTTCCCAACATACACAACAGTCCACTTCATCATCACGGTGTCCTATATAGGAATGTTCAGGAGGACCAAGGCTGCCACTACACGACGAATGATCACGAGGCGCTTCTGGACGAGCACGACGACAAAGCTGGGCTTATCCACGCTCCTCTGACGGCTCAAACCGGCATCTCCAGGCAGCAATTAATCAACAGTCCTTGTCCGATATGCGGCGACAAGATATCGGGCTTCCATTACGGCATCTTTAGCTGTGAATCGTGCAAAGGTTTCTTCAAAAGGACCGTGCAGAATCGAAAGAACTACGTGTGTTTGCGCGGCGCGGCATGTCCAGTAACAGTTGCGACGAGAAAGAAGTGTCCGGCGTGTCGGTTCGATAAGTGTTTGAAATGCGGAATGAAATTGGAAGCTATTAGGGAAGATCGCACCAGGGGTGGTAGATCCACCTACCAGTGCTCGTACTCGCTACCGCCGTCTCTTGCCGGCCATCTGGATTTAAGGGCTAGCGCGAGCGATCTCAGGCATGGCATGGGGGAGCATTCCCACCTCACCGTGAAACTCGAACCTTCGGATATTGGGATCTCTGGCCACTTGTCAAGCAAGAGGCTAAATTCCGCTCGCCATGGCGTCCCGGCATTATTGCAAGAAATAATGGATGTGGAACATTTATGGCACTATAGTGAGTCCGAGCTGAACAAACTAAACACGGAAGGTACCCTAAGCAAGGGTGGCTCGTCTAGTGCGGTTCACAATCTCTCCACTCACCCATTACTGGCGGGAACTGGTTTGGCTGGCTCTGCGGACACCAACCCCGATTTCGTAGCGAATTTGTGCAATATTGCCGACCATAGACTGTATAAAATTGTTAAGTGGTGTAAAAGCTTGCCTCTATTTAAGAATATCTCGattGATGACCAAATCTGCCTACTTATAAATTCCTGGTGTGAATTGTTACTATTCTCCTGTTGTTTCCGATCTATGGACAATCCCGGCGAAATCCGGATATCGTTGGGGAAGAGTTTAACGTTGCCTCAAGCGAGGGATCTCGGCATGCAGGCATGCATAGAGAGGATGCTGAACTTCACCGAACAATTGAGGAGGTTACGAGTCGATAAGTACGAGTACGTTGCTATGAAGGTTATAGTGCTGCTTACTTCAGatacctcggaactaaaagaagctGAGAAGGTACGCGCATCACAGGAGAAAGCTCTGAAAGCTTTGCAAGATTACACATTGGTACACTATCCGGACTTGCCGGCGAAATTTGGTGAATTGCTGCTGAGAATACCAGAATTGCAAAGAACTTGCCAGGCGGGCAAGGAGCTGttgacaataaaaacaaaagatggCGAGGGCCCTAGTTTCAACTTGCTGATGGAGTTACTTCGTGGGGACCACTAG
- Protein Sequence
- MFVLVDVVILSAIFVLPENLSIAQNKQPQTNDDSKESPILRLKHTVSTSTQHVSSYSLHSTPSNSPLLSQRQYSTTLTGGSGLPSSMIGHKDLMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHVTLTPNLSRNNSDASHSSCYSCSSVSVSVSPTQQFSPTHSPIQGRHHVPNIHNSPLHHHGVLYRNVQEDQGCHYTTNDHEALLDEHDDKAGLIHAPLTAQTGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLKCGMKLEAIREDRTRGGRSTYQCSYSLPPSLAGHLDLRASASDLRHGMGEHSHLTVKLEPSDIGISGHLSSKRLNSARHGVPALLQEIMDVEHLWHYSESELNKLNTEGTLSKGGSSSAVHNLSTHPLLAGTGLAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMDNPGEIRISLGKSLTLPQARDLGMQACIERMLNFTEQLRRLRVDKYEYVAMKVIVLLTSDTSELKEAEKVRASQEKALKALQDYTLVHYPDLPAKFGELLLRIPELQRTCQAGKELLTIKTKDGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01098567;
- 90% Identity
- iTF_00136915;
- 80% Identity
- iTF_00981230;