Basic Information

Gene Symbol
ct
Assembly
GCA_964023965.1
Location
OZ030395.1:11228192-11251850[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.4e-27 1.1e-22 81.5 0.0 3 72 362 432 360 437 0.94
2 3 2.9e-32 3.4e-28 99.1 0.0 2 77 736 812 735 814 0.96
3 3 2.9e-30 3.4e-26 92.7 0.0 3 75 949 1022 947 1026 0.95

Sequence Information

Coding Sequence
ATGGACGTAAAAGTAGTAAAACCCCAGTTGGAAGCTGGCTTATTTGAGCCTAAACGCGATGGGGTTAGCTTGACATCCGCGCTGAAAGACAAGGACATCGCCGAACTGAAGGGACAAGTAGCGAATTTGGAGAACAAACTCGAGGCGAACATGGACAGGCACAGCTTCGAATCGGAAATAACCTCCAAAGAAAAGCAGATAAGTCAATTAGTGGAAGAACTCCAGAGGCGAGAGGCCACAATAGCAAAACTACACGAAAACTACTCCAAACTACCACTTTTGGAGGAACAAATAGAACAGAAAAATCAGTACATAGCGAAATTGGAGGCTAAATTAGAAGCACAAAAAGACTACGAGGATATCAAAAGAGAATTATgTATTTTAAAATCGGTAAATTCGAATTTACCAGAAAATAAATTAGACCAATTGAAGCAAGAACAACCAAAAAGCCCGATACATCAAGACATCGAAGGTGATCTGCCAGCATCACAACCCTTACCACCGATGCTCCCAGAACCTCAGCAAACGACCACCCCGCCCGTGTCAAATCACCACCACCCTCAAACACCACTACCCCCGCCCTTCCAAAATGTGGAATCATTTGGATCATTACTGGGTGAGGAAATACTAGCCAATTGGCGTCGTAGCATAGAACAAACAACCAATTTGAACAACCGAATAATAAATCCAACACCTACAGATGTCCAACCGATGGAGGTGCACCAACACCACCACGAGAAAAGCACCACCTCGACGCCGCAACCCCAAGACATCCGGCAACCCTCGCCACTAATGCTAAACGGCAACCCGAAAAGCCCCGAAGACAACAACAACCACCACGTTTCCAACAACAACATCCCTCTATCCGCGACGGTGTGCGCGGTGAACAACTTCCTGAAGACAGAAGACCTTAAGAACCCTTATAGATTCGAGGAGCATAGATCGTTCAGGTTCGCTGAAGATCTGGGCATGCCTCCAGGTTCGATGGTCGGAAGGCTTGGGGAGAGTCTGATTCCAAAAGGAGATCCAATGGAAGCGAGACTGCAGGAGATGCTGAGGTTCAACATGGATAAATACGCCACCCAGAACTTGGACACCCTGCATATCTCGAGGAGGGTTAGGGAGTTATTATCCATCCATAATATTGGACAAAGGCTATTTGCGAAGTACATCCTTGGATTGTCGCAAGGGACCGTTTCTGAGTTGTTATCCAAGCCAAAACCGTGGGATAAACTCACAGAGAAGGGGAGGGATAGCTACAGGAAGATGCATGCGTGGAGTTGTGATGACAACGCTGTGCTCCTGCTGAAGTCGCTAATACCAAAGAAAGACAGTTTTTCCTCAGGGAAAGAATCAGGGATGCCAACTTTTGGCCGACCGGAACCGAACGACTATAACGACGACAGGATAGTTCATATGCTCAGCGAGGCATCACAACAAATGCACAAAAATATCGAGGATACTCACAGTAACGACTCAAAATCGCCGCAAGGGTGTCCCAGCCCCTACTCAAAGGATTCTTCGCAAAATAGAAAGTTAAAGAAGTACGAAAATGATGACATCCCACAGGAGAAGGTCGCCAGGATATACCAGGAAGAAATGGCCAAACTAATGGGACGGCGGATGGACGACATGAGAACCACGAGGGACATGCAAGGGATGTTCCTACCTCAAATCTTCACTGCGAATCCGATGGAGCGAAGCCAGGATGACGTCCGCGCGTTATTCGATGCCTATCATCAGTTAGCCAAAATTCAGCAATGTCCAAACCCGCAATTACAAAACTTAGGCCTCCTTGCCTTACACCAGCAAGCCATGGCGCACCAAAACCCCATAGTGAACAACGGAGCTCAAGATTTATCGTTGCCCAAAGAAAAGATGAAGATGGTCAATGGGTCTGATGATAAAGACAAGGAAGACGATAAGCATAATTCAGCGTTTAGCTTAGTCAGACCAAAATTAGAAGTTGGGACACCTCAGACTACAAGTTCTACAGCCTCCAGCCCTTTGGGGAATTCAATTTTGCCACCGGCGATGACACCAACTGATGAATTCAGTAGTTCAGCAGCTGCCAGTCCTTTGCAGAGGATGGCTTCGATTACCAATAGTTTAATTTCGCAACCGCCGCAACAACCTCATCCCACATCTTCGCAAAGGCCTCTGAAAGCGGTGCTGCCACCAATCACGCAGCAGCAATTCGATATGTACAATAACCTGAATACTGAGGATATCGTAAAGAAAGTTAAGGAGCAACTTAGCCAGTATTCAATAAGCCAGAGGTTGTTCGGTGAGTCTGTTCTTGGGCTGAGTCAAGGGTCTGTTAGTGACCTATTGGCAAGGCCCAAACCATGGCATATGTTGACCCAGAAAGGCAGGGAACCTTTTATTAGGATGAAAATGTTTTTGGAGGACGATAATGCTGTTCATAAATTGGTTGCGAGTCAGTACAAAATCGCGCCTGAGAAGCTGATGAGGACTGGCGGATACGGCGGAGTTCCCCATTACATTTCAGCATGCGCCTCAGTACCAAAACCAATGCCAACGACACCAAAGATGTTAAGCGAAGCTGCTGGACTCCTCAACCACATGAAGGATTCCCCTCTCTTACCACCAAGCCTACAGATGTCACACCACAACCCCAACAACCCTCAACCACCTCCACCACCAATGCTCCTAACGCCACCAGGGGTACCACCGCACCATGCCATCAACCTCCAGAACCAAGAACACATGAAGAAGACCAGTCACAGCCCGCTCACACCGAACCCCATGAGCCAACAGGTGAACATGAGGGCCCTCCACCAGCACATCTCGCCGAGCGTCTACGAGATGGCAGCACTCACGCAGGATTTGGACACCCAGGTGATCACAACCAAAATTAAAGAGGCGTTATTGGCGAATAACATCGGTCAAAAGATTTTTGGAGAAGCTGTGTTGGGTTTGAGTCAAGGGTCGGTGAGTGAGTTGTTGTCTAAGCCGAAACCATGGCATATGTTGAGTATCAAAGGAAGGGAGCCTTTTATTCGGATGCAGTTGTGGCTGAACGACGCACATAACATCGATAGGCTTCAAGCGTTGAAAAATGAACGGAGGGAGGCCAATAAACGAAGAAGGTCTTCCGGGGCTGGTAACCATGATAATTCTTCGGATACATCGTCGAATGATACCTCGGAGTATTACCATTCGAATTCTCCTGGTCCCGGACCACCAGCACCCAAGAAGCAACGGGTTTTGTTCACGGAATACCAGAAGTTAGCACTAAACGTTGCGTATGAGTTGAAAAACTACCCCAACCAGACAGATACCGATTTCTTGGCTTCCGAATTGGCTCTACCGGATCGGACGGTGTCCAACTGGTTCCACAACCATCGGATGAGGCTGAAACCTTCTGGCAATGCCACAGACCGCGACCAGGCTGCAAACCAACCACCGTTAGACCCAGCTAGGTTTAGGCTTCTCTTAGGGAAACGTATGATGGATATGTCCCAAGAAAGAATAGGCCTCAGCAATATCCCCCTGGGGTACCCTTATCTAGCGAATCCGAACATAGCAGCTCTTATAAGCAGGGGGTTGCTCCAGTCGGGTGATATCGATTTATCAGCTTTGAATAACGCGGTTAAAGAGCAAATGTCAGGGTTGGATCTATCCATGGGTATTAAACGTGAATCTGAGTTTGAGGACGATGATATGGATAGTAATGTGGGGAGTGAGGATTCGAATATTTCTGGGAGTTTGGAGGTTAAGATCGAGCAGAAGGAGCAGCCTGTGTCGCAGAGTCGGTCTTCCAGGAGGAAACCGGCTGCGCCGCAGTGGGTGAATCCTGATTGGCAAGACGAGAAGGAGAAGCAACCGCAAACTGGGGATGAGGTTATAATTAACGGGGTTTGCGTGATGCAGACTGAGGATTATGGTAGGAGGAATTCGGAAGAGACCATAAGGATCGAACCGACGCCTGTTTTAGATAGGTACGATGATGACAGAAGTGAGACGTCATCAGTAAGTCACGATACCGAAAAACCTGAGGAGAAATCAGAGGAGAACGAGGACAAATCCATAAAAGAGGAAAACCTCGAAAGATGGGACTATTAA
Protein Sequence
MDVKVVKPQLEAGLFEPKRDGVSLTSALKDKDIAELKGQVANLENKLEANMDRHSFESEITSKEKQISQLVEELQRREATIAKLHENYSKLPLLEEQIEQKNQYIAKLEAKLEAQKDYEDIKRELCILKSVNSNLPENKLDQLKQEQPKSPIHQDIEGDLPASQPLPPMLPEPQQTTTPPVSNHHHPQTPLPPPFQNVESFGSLLGEEILANWRRSIEQTTNLNNRIINPTPTDVQPMEVHQHHHEKSTTSTPQPQDIRQPSPLMLNGNPKSPEDNNNHHVSNNNIPLSATVCAVNNFLKTEDLKNPYRFEEHRSFRFAEDLGMPPGSMVGRLGESLIPKGDPMEARLQEMLRFNMDKYATQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVLLLKSLIPKKDSFSSGKESGMPTFGRPEPNDYNDDRIVHMLSEASQQMHKNIEDTHSNDSKSPQGCPSPYSKDSSQNRKLKKYENDDIPQEKVARIYQEEMAKLMGRRMDDMRTTRDMQGMFLPQIFTANPMERSQDDVRALFDAYHQLAKIQQCPNPQLQNLGLLALHQQAMAHQNPIVNNGAQDLSLPKEKMKMVNGSDDKDKEDDKHNSAFSLVRPKLEVGTPQTTSSTASSPLGNSILPPAMTPTDEFSSSAAASPLQRMASITNSLISQPPQQPHPTSSQRPLKAVLPPITQQQFDMYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGVPHYISACASVPKPMPTTPKMLSEAAGLLNHMKDSPLLPPSLQMSHHNPNNPQPPPPPMLLTPPGVPPHHAINLQNQEHMKKTSHSPLTPNPMSQQVNMRALHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGAGNHDNSSDTSSNDTSEYYHSNSPGPGPPAPKKQRVLFTEYQKLALNVAYELKNYPNQTDTDFLASELALPDRTVSNWFHNHRMRLKPSGNATDRDQAANQPPLDPARFRLLLGKRMMDMSQERIGLSNIPLGYPYLANPNIAALISRGLLQSGDIDLSALNNAVKEQMSGLDLSMGIKRESEFEDDDMDSNVGSEDSNISGSLEVKIEQKEQPVSQSRSSRRKPAAPQWVNPDWQDEKEKQPQTGDEVIINGVCVMQTEDYGRRNSEETIRIEPTPVLDRYDDDRSETSSVSHDTEKPEEKSEENEDKSIKEENLERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2