Basic Information

Insect: Aphodius granarius
Gene Symbol: ct
Assembly: GCA_963971325.1
Location: OZ020224.1:32380343-32387191[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 4.7e-27 3.8e-23 82.1 0.0 2 72 315 386 314 391 0.95

2 3 3e-32 2.5e-28 98.7 0.0 3 77 697 772 695 774 0.96

3 3 2.3e-30 1.8e-26 92.7 0.0 3 75 907 980 905 984 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	4.7e-27	3.8e-23	82.1	2	72	315	386	314	391	0.95
2	3	3e-32	2.5e-28	98.7	3	77	697	772	695	774	0.96
3	3	2.3e-30	1.8e-26	92.7	3	75	907	980	905	984	0.95

Sequence Information

Coding Sequence: ATGGCCGACGAACCAGTCAAGAGAGAAGTCGAAAATCACTCTATGAAATCCATCAGCCAATTAGTCGAGGAACTACAGAGGCGGGAGGCCACCATCGCGAAACTACACGAGAACTACTCGAAACTACCCCTCTTAGAAGAACAACTCGAACAGAAAAACCAATATATATCGAAATTGGAAGCGAAATTAGACTCTCAAAAAGACTACGATGACATCAAACGAGAATTAAGTGTATTAAAATCGTCGAATTCGAATTTACCCGAAAATAAACTAGAACAATTGAAGCAAGAACAACCTAAGAGCCCCGTGAACCAAGACAACGAAGGTGATCTACTACCCCGTCTCCCAGAACCTCAACAAACACCCCCGCCACCACACCCCCAAACGCCGTTACCCCCTCCCTTCCAAAACGTGGAAGCATTTGGCACGTTACTGGGTGAGGAAATCATAGCTAATTGGCGACGTAGTATAGATTTGAACAATCGAATAATCAATCCAAACCAACCTACAGATGTCCAATTGGAACAACAACAACACCATCACCACGAGAAAAGCGCTACCTCGACACCACAACCACAAGATATCATCATCAGGACAGACCGACAAGATATAAGGCAAGATTTACGACAAGACATCAGGCAATCTTCACCTCTGATGTTGAACGGCAACCCCAAGAGCCCGGAAGACAACAATAACCACCACGTCTCCAATAACAACATCCCACTCTCAGCCACGGTCTGCGCAGTGAACAACTTCCTCAAATCTGAAGACTTGAAAAACCCGTATAGGTTCGAGGAACACCGGTCTTTTAGGTTCGCCGAAGACTTGGGCATGCCTCCAGGGTCCATGGTTGGACGTCTTGGGGAGAGCCTGATCCCAAAGGGCGACCCCATGGAGGCTAGACTCCAAGAGATGTTGCGGTTCAACATGGATAAATACGCAAGCCAGAATTTGGATACGTTGCATATTTCGCGGAGGGTTAGGGAGTTACTGTCGATCCACAACATTGGACAACGGTTGTTCGCCAAGTATATCCTTGGGTTATCCCAAGGGACCGTATCTGAGTTGTTATCCAAGCCGAAACCATGGGATAAACTCACAGAGAAAGGACGAGATAGTTACCGCAAGATGCACGCTTGGAGCTGCGATGACAACGCGGTTCTACTTCTGAAGTCGCTCATACCAAAGAAAGACAATTTTTCCTCAGGGAAAGAATCGGGTGGCGGTGGTGGTGGAATACCGACATTCGGAAGGCCCGAACCGAACGATTACAACGACGACCGGATAGTCCACATGCTCAGCGAGGCGTCCCAACAAATGCACAAGAACATCGAAGACACGCACAGCAACGAAGACTCAAAGTCGCCGCAGGGCTGCCCCTCACCGTACTCCAAAGAATCGTCGCAGAACCGCAAGCTCAAGAAGTACGAGAACGACGACATCCCGCAGGAGAAAGTCGCCAGGATATACCAGGAAGAGATGGCCAAATTGATGGGTAGACGGATAGACGATATGCGCAATACACGCGACCTCCAAGGgaTGTTCCTTCCTCAAATCTTCTCTGGGAACCCCATGGAGCGCAGTCAAGACGACGTAAGGGCGTTATTCGATGCCTATCACCAGCTAGCTAAGATGAATCAGTGTCCAAACCCCCAATTACAGAATTTAGGGTTGTTGGCGCTGCATCAGCAGGCGATGGCTCATCAAGGGCCTATGGTGAACAACGGAGCGCAGGATCTTTCCCTACCCAAAGAAAAAGCGAAGATGGTGAATGGAACTGATGATAAAGACAAAGAAGATGACAAGCATAATTCGGCGTTTAGTCTTGTGAGGCCGAAATTGGAAAGTGGGACGCCTCAAACCACGAGTTCTACTGCCTCAAGCCCTTTGGGGAACTCTATTCTACCACCGGCGATGACCCCAACTGATGAATTCAGTTCATCAGCAGCTGCTAGTCCTTTGCAGAGGATGGCGTCGATTACCAATAGTCTGATTTCGCAACCACCGCAACAGCCGCACCCCACGTCGTCGCAAAGACCGTTGAAAGCTGTTCTTCCACCGATAACTCAACAGCAGTTCGATTTGTACAACAATTTGAACACTGAGGATATTGTTAAGAAGGTTAAGGAGCAATTGAGTCAGTATTCGATCAGCCAGAGGTTGTTTGGGGAGTCTGTTCTTGGGTTATCGCAAGGGTCTGTTAGTGATTTGTTGGCAAGGCCGAAACCGTGGCATATGCTGACGCAGAAAGGACGAGAGCCGTTCATAAGGATGAAGATGTTCTTGGAGGATGATAACGCTGTGCATAAACTAGTCGCCAGTCAGTACAAGATTGCTCCAGAGAAATTAATGAGGACGGGAGGTTATGGAGGAGTCCCGCATTACATTACAGCAGCCGTGCCCAAACCCATGCCCACCACACCAAAGATGCTCAGCGAAGCCGCAGGCCTCCTCAACCAAATGAAGGACTCACCACTCCTCCCACCGAGCCTACAGATGTCGCACCACAACAACCCGCAACCACCACCACCCCCGATGCTCCTAACCCCACCAGGAGTACCCCCACACCACGCCATCAACCTCCAGACCCAAGAACACCTGAAGAAAGGCCACAGCCAGAGCCACAGCCCCCTCCAACAGGGCGGCCTCGTCCAGCAGAGCATGCGCAGCCTCCACCAGCACATCTCCCCATCCGTTTACGAAATGGCCGCCCTCACGCAAGATTTAGACACGCAAGTCATCACGACCAAGATCAAAGAAGCCCTATTGGCGAACAACATCGGCCAGAAGATCTTCGGCGAGGCCGTGTTAGGCTTGAGCCAAGGTTCGGTCAGCGAGCTGTTATCCAAACCAAAACCATGGCATATGTTGAGTATAAAGGGCCGAGAACCGTTCATAAGGATGCAGTTATGGCTGAACGACGCGCATAACATCGATCGGCTCCAAGCGTTAAAGAACGAGAGGCGAGAGGCGAACAAACGGAGGCGGTCTTCAGGGCCAGGAAATCACGATAACTCCTCTGATACGTCCTCCAATGACACCTCGGAGTATTATCACTCGAATTCACCGGGTCCTGGACCTCCAGCCCCGAAAAAACAAAGGGTTTTGTTCACGGAATACCAAAAACTAGCGTTGAACGTGGCGTATGAGCTCAAGAACTACCCGAATCAAGCTGACACCGACTTCCTAGCTGGTGAGTTAGCCCTACCGGATCGAACGGTCTCAAACTGGTTCCACAACCACCGGATGCGGTTAAAACCCTCCGGGAACGCGACAGATCGAGACCAGGCCGCGAACCAACCACCCTTGGACCCGGCAAGGTTCCGACTCCTCCTCGGCAAACGAATGATGGAGATGTCCCAGGAACGCATAGGCCTGGGAAACATACCCATCGGGTACCCATACCTAGCCAACCCTAATATCGCCGCCCTAATCAGCAGAGGTCTCCTCCAATCAGGCGATATCGACCTATCAGCTTTAAACAACGCGGTCAAAGAGCAAATCTCCGGTCTTGACCTATCCATGGGTATCAAACGCGAGTCGGAATTTGAAGACGACGATATGGACAGCAATGTGGGAAGTGAAGATTCGAACATCTCCGGGAGTCTAGAGGTCAAAATCGAGCAGAAAGAACAACCTGTTAGCCAGAGTAGGTCGTCTAGGCGGAAACCGGCCGCCCCGCAATGGGTCAACCCCGACTGGCAAGACGAAAAGGAGAAGCAACCCCAAACTGGCGACGAGGTTATAATCAACGGCGTTTGCGTGATGCAGACCGAGGATTACGGGAGGCGAAACGCGGAGGAGACCATACGGATCGAGCCGACGCCCGTCCTGGATCGGTTTGAGGATGACCAGAGCGAAACGTCGTCTGTCAGCGCGGGCGATGAAAAACCCGAGGAGGAGAAGGCGACGGAGGAAACGGACGCGGAAAAATCGTCGATCAAAGAAGAGAACTTAGAACGATGGGACtattaa
Protein Sequence: MADEPVKREVENHSMKSISQLVEELQRREATIAKLHENYSKLPLLEEQLEQKNQYISKLEAKLDSQKDYDDIKRELSVLKSSNSNLPENKLEQLKQEQPKSPVNQDNEGDLLPRLPEPQQTPPPPHPQTPLPPPFQNVEAFGTLLGEEIIANWRRSIDLNNRIINPNQPTDVQLEQQQHHHHEKSATSTPQPQDIIIRTDRQDIRQDLRQDIRQSSPLMLNGNPKSPEDNNNHHVSNNNIPLSATVCAVNNFLKSEDLKNPYRFEEHRSFRFAEDLGMPPGSMVGRLGESLIPKGDPMEARLQEMLRFNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVLLLKSLIPKKDNFSSGKESGGGGGGIPTFGRPEPNDYNDDRIVHMLSEASQQMHKNIEDTHSNEDSKSPQGCPSPYSKESSQNRKLKKYENDDIPQEKVARIYQEEMAKLMGRRIDDMRNTRDLQGMFLPQIFSGNPMERSQDDVRALFDAYHQLAKMNQCPNPQLQNLGLLALHQQAMAHQGPMVNNGAQDLSLPKEKAKMVNGTDDKDKEDDKHNSAFSLVRPKLESGTPQTTSSTASSPLGNSILPPAMTPTDEFSSSAAASPLQRMASITNSLISQPPQQPHPTSSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGVPHYITAAVPKPMPTTPKMLSEAAGLLNQMKDSPLLPPSLQMSHHNNPQPPPPPMLLTPPGVPPHHAINLQTQEHLKKGHSQSHSPLQQGGLVQQSMRSLHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGNHDNSSDTSSNDTSEYYHSNSPGPGPPAPKKQRVLFTEYQKLALNVAYELKNYPNQADTDFLAGELALPDRTVSNWFHNHRMRLKPSGNATDRDQAANQPPLDPARFRLLLGKRMMEMSQERIGLGNIPIGYPYLANPNIAALISRGLLQSGDIDLSALNNAVKEQISGLDLSMGIKRESEFEDDDMDSNVGSEDSNISGSLEVKIEQKEQPVSQSRSSRRKPAAPQWVNPDWQDEKEKQPQTGDEVIINGVCVMQTEDYGRRNAEETIRIEPTPVLDRFEDDQSETSSVSAGDEKPEEEKATEETDAEKSSIKEENLERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00136737; iTF_00980723; iTF_00980841; iTF_00137691; iTF_00137811;
90% Identity: iTF_00980723;
80% Identity: iTF_00136737;