Most021827.1
Basic Information
- Insect
- Melikaiella ostensackeni
- Gene Symbol
- tfip11
- Assembly
- GCA_032362435.1
- Location
- JAUMHM010000072.1:3916396-3921182[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-96 2.3e-91 308.5 14.7 2 275 398 664 397 664 0.98 2 2 0.074 2.2e+03 0.3 0.0 244 272 678 706 669 721 0.70
Sequence Information
- Coding Sequence
- ATGTCTGAAGACGAaatagaaagttttgaaattacagACTTTGATCTGGAGAATGAATTCAATCCAAATCGTTCTCGGCGAAAGCTTTCCAAAAAGCAACAAATGCTTGGAATGTGGGCCGATGATAGTGACGATGAAGAAGAAACGACAAGCAGACCatctttcaaaacattcaatagAGGTCCAAAAAATTACACAGCTCCTGTCAATTTTGTTGCTGGAGGAATTCAGCAGTCAGGAAAaccgaaagaagaaaaaaagcatGAGGAAGATGAAGAGGAAGAATCTGGAAGACCTAGAAGAGGAGATGCTGATTATGTCCCAAATAGTTCAAGTGACTCTGAACCTGAGGGACTCAGCAACATAAAATCTCGGAGagctttttcattgaattcagatggCGACATAGCTGGTCTAAGAAAAAAGAAGATACCTTTGAATCCTGCTCTTTTGAATACTGGAGTTGGAAACTGGGAAGTTCACACAAAAGGAATCGGAGCAAAGCTTTTACTTCAGATGGGATTTGAACCAGGTAAAGGTCTGGGAAAAAATCTGCAGGGTATAGGTGCTCCAGTAGAAGCTCATCTCCGAAAAGGAAGAGGAGCGATTGGAGCCTATGGTCCTGAAAAATTTGCCAAGATTGCtgaaaagaagaaggaagaagtaACTGAAGATGCGAAAGAACAAAAAGGCAAAACTTCTCAATGGAGAAAGGGCGATGCGGTAGGAAAAAAGAAAGTTAGGTACTGTTATCGAAGTGTGGATCAGGTTATAGAAGATGGAAAGCTCAGGCCTAATAGAAAAGCTGGTGTGAGTAGTGAAATGAGCAGAGTTAAAGTCATAGATATGACAGGACCAGAAAAGCGAGTTTTGAGCGGTTATCATGCGATTGGAAGTGGCCAACAACAACGTCCAGATGAGACCGTATTGATTTCTGACAAgaaatctaaatctaatttcGTCTTGCCTGAACTTCAGCATAATTTGGACCTTCTTGTTGACATGTGTGAACAGGATATTATTCAGAACGACAGAAGGAATCGACACCTGGGTGATAGGCTGATTGCACTTGAAGCAGAGAAAACTAATCTTGCGAAGATTGTAGATCAGCATGGGCAGTTGATTGATACTTTGGAAAATGTATTGACCGTTGTGGATCGGCTAATGAACGAAAATAATGAGTTGACTCTGAAGGATACTGCAGCGGCTTTTAAGAGTTTGCAGGACAACTATTATGAGGAGTATAAAATGTATGAGTTGGGGGAATTAGCTAGCAGTTTGGCGGTACCGAAAGTTATGGAGTCTTTGGTGTCCTGGAATCCTTTTATGCAACCGAAACAACCTTTGGAGTTGTTTAAACAGTGGAAGGATATTTTGGAAAGTGGGAAGCCTACACTTCATACGAGATCCTTGCATCCTTATGATCAACTTGTATGGAACGCCTGGGTGCCTTCGATAAGGGGAGCAGTGAAAGAGTGGAGATGCAGACAACCGGAACCGCTAATCGATCTGATCGAAAATTGGATGCCTTTACTCCCGAGCTGGATTTTAGACAACATTTTAGATATGCTAGTGCTTCCAAAATTGACCCTCGAAGTTGAAGATTGGAACCCTTTAACGGATACAGTCCCAATTCACACTTGGATTCACCCATGGCTTCCGCTCTTACGTAACCGTTTAGACACCCAGATTTATCCAATAATTCGCCGCAAACTTGGATCAGCGCTTGGTGGTTGGCACGCAGCCGATAGATCAGCAAGATTGATGTTGGAGCCCTGGTCTCAAGTATTTCCAAAAGGAGACTTGGAGGCTTTTCTAGTAAAGAATATTGTCCCGAAACTTCAGATAGCACTTTCGGAACTCGTGATAAATCCCCACCAGCAGCATTTGGACCAATGGCACTGCGTTTATGAGTGGAGAGAACTACTTCCGATCCACATTATGGCGGGTTTGCTCGACAAGTTTTTCTTTCCAAAGTGGCTTCAAACCTTGGCTCTTTGGCTGAATCATTCGCCTAATTATGACCAGGTTACGAATTGGTACATCGGGTGGAAGGGATTACTTAATGACAAATTACTAGGGGAACCAGTTATTAAAGAACATTTTAAGAAAGCTTTGGATATGATGAACAGAGCTGTTTCCGTTACTGATGGTCTACAGCCAGGAGCTATGGAGCAAGTCTCGTATTTGACGAGTTTGGAAAGAAGTCAGCCGCCTATTTCGCAAATGCCTTCTAATGTCCAGCCAAGAGTTGAgAGTATCGCTGAAGCAATGAGGATCGTAAACCAAATTCCACACGGATTTAAAGACTTTGTGCAGAAAAAATGCGAAGAGAGGGGAATTCTCTTCATGCCGATTCCGAATAGATATCGAGAAGCAAAGCAAGTTTACAAAGTTGGGAATATGCAGGCATATATTGATGGAAATGGTCTCTTCGTTTGTCACAGCGGTACCAATTGGGTTCCTACTAATTTGAACGCCCTCTTAGATATGTGCGAGATCTAA
- Protein Sequence
- MSEDEIESFEITDFDLENEFNPNRSRRKLSKKQQMLGMWADDSDDEEETTSRPSFKTFNRGPKNYTAPVNFVAGGIQQSGKPKEEKKHEEDEEEESGRPRRGDADYVPNSSSDSEPEGLSNIKSRRAFSLNSDGDIAGLRKKKIPLNPALLNTGVGNWEVHTKGIGAKLLLQMGFEPGKGLGKNLQGIGAPVEAHLRKGRGAIGAYGPEKFAKIAEKKKEEVTEDAKEQKGKTSQWRKGDAVGKKKVRYCYRSVDQVIEDGKLRPNRKAGVSSEMSRVKVIDMTGPEKRVLSGYHAIGSGQQQRPDETVLISDKKSKSNFVLPELQHNLDLLVDMCEQDIIQNDRRNRHLGDRLIALEAEKTNLAKIVDQHGQLIDTLENVLTVVDRLMNENNELTLKDTAAAFKSLQDNYYEEYKMYELGELASSLAVPKVMESLVSWNPFMQPKQPLELFKQWKDILESGKPTLHTRSLHPYDQLVWNAWVPSIRGAVKEWRCRQPEPLIDLIENWMPLLPSWILDNILDMLVLPKLTLEVEDWNPLTDTVPIHTWIHPWLPLLRNRLDTQIYPIIRRKLGSALGGWHAADRSARLMLEPWSQVFPKGDLEAFLVKNIVPKLQIALSELVINPHQQHLDQWHCVYEWRELLPIHIMAGLLDKFFFPKWLQTLALWLNHSPNYDQVTNWYIGWKGLLNDKLLGEPVIKEHFKKALDMMNRAVSVTDGLQPGAMEQVSYLTSLERSQPPISQMPSNVQPRVESIAEAMRIVNQIPHGFKDFVQKKCEERGILFMPIPNRYREAKQVYKVGNMQAYIDGNGLFVCHSGTNWVPTNLNALLDMCEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01390211;
- 90% Identity
- iTF_00089540;
- 80% Identity
- -