Mvil051827.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_963082815.1
- Location
- OY720422.1:22758167-22761612[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.26 2.7e+04 -3.4 2.4 89 106 86 103 18 151 0.52 2 3 6.9e-107 7.2e-102 343.2 34.0 1 300 167 460 167 460 0.93 3 3 0.028 2.9e+03 -0.3 6.0 121 170 459 508 458 535 0.67
Sequence Information
- Coding Sequence
- ATGAGTGACACAGAGGATAGAAATTTATCGGGGAGCCTCGATTCGCTTGCggatatattaaataatttagactCAGATGTGGAAGAATTTGAGGACGATAAAGATAATACAAGTGTGGAAGGCAGTGCCAAATCACATCCTCGACAAGAATATAATAACGAGGATCCTACGAAAAGTGTAGATCATAGTTCGAATAGTATAAAAAACACACCAAAACAATCTGTTTCGGAAAATGTTGGATTAGAAATGTTAAACTTGGATTTATCCAAAGAACACTTaaacaattttgagaaaaacttGCTGACAAATTCTGATAGTAATAAAGGTTTGGATTTGGAGAGCAGTAAGctagaaaaaattaaactggaAGGAGTGACGGAGGATGAAACGGACGATTCTGAATTAGTACAAAAGAAACTTAATAGGAGTCAAAGTATAAAATCGGAATATTCAGAAACTAGTGTTATTAAGCAATTTCTGGATCATTGTAATGATGATgcagAGGCACGTCTTTTGGCAAGAAGGCAGGCTAGGGCAGAAGCCAGAGACATCCGTATGCGAGAGCTGGAGCGACAACAACGAGAGCAAGAAGAAAATGCTGACCGGCAGTACGACATGCTGGAGGCAACAACTCGTGCAGCTAGAACTTCTGGAAATCGATACCTTTCAAGTCGACGAAGCTCGGAGGACTCTCTTGAAGATGGAGGCAGCCTTAGGGAGATACGGCATGAACTTAAAGAGATGGAAGAAAAGTTCCGCAAGGCTATGATAGCGAATGCTCAATTAGACAATGATAAAGCCTCACAAACATATCAGCTAGAACTGCTTAAGGATAGgttagaagaattagaagaagagCATTCCCAGCTTCGTCGAGAACATAGAGATAAATGTAGGGAGCACGACCAACTCAAACGATTAGCTGCACGGCTTAAAGACGATTTGGCTGTGACTCGAGCAGAGTTAGAGGAACGTGACCGGTTAATTGCTGAGAAGGGTTTGGTAATAGTAGTAGAAGATCTAATTCCTTATGAAGATGATATCGGAGGAGATACTAGTAACAATGGCATTGTTAATACACCTAAAAAGGCACTTGTAAGTGCTGAAAATGCTCAGTTGTTGGAAAATGCCGGTGAAGGAAGTCTAGATGTACGGTTAGCAAGGTTCGCTTCAGAAAAGAAAGATCTTCAAGATCAAATCAGTCACCTAAGATtagaattagaagaagaaaaaagtaaaaaaagaaaaactagtgGTGTTACTCTTAACGGACCTACGTCTGATTCAGATTACGATGCCGATGATGTACAAAAAGATATTGTGAGACAGTTAGCGGATTATAAATTTAGAGCTCAAAAAGCTGAACAAGATGTGGCAACACTACAAGCAACAGTAGCACGACTAGAAAGTCAAGTAATTAGATACAAGTCTGCAGCAGAAATGTACGAAAAGTCTGAGGAGGCTTTGAAACAAGAGAAACGGAAATTACAAAGAGAGgcGAGAGAGGCGCAAAATCGAGCAGAAGAATTAGAAACATCAAATACGCACTTGTTAAAACGATTAGACAAACTTAAAAATGCCAAATCAACGTTGCTTAAGGAACTTTGA
- Protein Sequence
- MSDTEDRNLSGSLDSLADILNNLDSDVEEFEDDKDNTSVEGSAKSHPRQEYNNEDPTKSVDHSSNSIKNTPKQSVSENVGLEMLNLDLSKEHLNNFEKNLLTNSDSNKGLDLESSKLEKIKLEGVTEDETDDSELVQKKLNRSQSIKSEYSETSVIKQFLDHCNDDAEARLLARRQARAEARDIRMRELERQQREQEENADRQYDMLEATTRAARTSGNRYLSSRRSSEDSLEDGGSLREIRHELKEMEEKFRKAMIANAQLDNDKASQTYQLELLKDRLEELEEEHSQLRREHRDKCREHDQLKRLAARLKDDLAVTRAELEERDRLIAEKGLVIVVEDLIPYEDDIGGDTSNNGIVNTPKKALVSAENAQLLENAGEGSLDVRLARFASEKKDLQDQISHLRLELEEEKSKKRKTSGVTLNGPTSDSDYDADDVQKDIVRQLADYKFRAQKAEQDVATLQATVARLESQVIRYKSAAEMYEKSEEALKQEKRKLQREAREAQNRAEELETSNTHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -