Mvil042170.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanotus villosus
Gene Symbol
tfip11
Assembly
GCA_963082815.1
Location
OY720421.1:28963667-28969168[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-98 2.9e-93 315.0 11.0 1 275 401 672 401 672 0.97
2 2 0.11 5.8e+03 -0.9 0.1 242 271 684 713 676 719 0.70

Sequence Information

Coding Sequence
ATGTCAGATCAAGAATatgaaaagtttgaaattacTGATTATGATATCGAAAATGAATTTAATCCAAACAGAAGTCGCAGAGGTCTTAGTAAAAATCAACAGATTTATGGTATATGGGCGGACGATAGCGATGATGAAGCCGATGAAAGACCGTCATTTAAATCATCGAAAACTCCAAAGAACTACTCGGCACCTATAGGATTTGTAGCAGGTGGTGTACAACAAGCTGGAAAAAAGGACAAACAGAGTGGTGcggttaaaaaagaagaaaacagtgATGATGATTCGGAAACACCATCGGCTTCgtttaaagttgaaaatagTTCTAGTGATTCTGAGAATGAAACGCGAATACCTCGAACAGGTTTCGGAGCCCAAAAATCCCGAACGCAATCGGTAGTCACAGAGGTTACAGGAGACATAGCAGGTTTAAGAAAGTCCAACAGCCAAGTAAATTCAAGTTTAATGAGAAAAGGGGTCGGAAATTGGGAGAAACACACAAAAGGCATTGGAGCTAAATTGCTGTTACAAATGGGTTATCAACCGGGTAAAGGATTAGGAAAGGATTTGCAGGGTATATCTGCTCCCGTTGAAGCACATTTAAGAAAAGGACGAGGTGCTATTGGTGCATACGGACCTGAAAAGGCTGCCAGTATTGCTGTTATAAAgGAAAAAGTAGAAAGCATCGACGAGCCTGATAAAGAATCAGAATCAAAATGGAAGAAAAGCGATATGGCAAAGAAGAAGACTCGATATTATTACAGAACCGTAGATGATGTTATTGAAAAAGGTAAACGTCCGGGTGTTTATATGGGTTCAGGACCCACAAGTGAattaagtaaagtaaaagtAATCGACATGACAGGCCCCCAACAAAGAGTATTAAGTGGTTATCATGCTCTTAGTGGCTTAAAAGCACCTCCAGGCGTAGAACATTTCGAAGACGTTGTccataaaaaatgttcaaattttgcattGCCGGAAATTCAACACAACTTGGACTTGCTCGTCAATATGTGTGAACAGGATATAATTTCGATAGATCGAGGTACGAGGTATAGCCAAGACAAAGGGGTTGCATTAAAACATGAAGAACGCTCTTTAAACAAAGTATTAGATGATGAAGATAAGCAGCTAGACAATTTAAAAGAGGTGCTTGATTATATTGATCAGTTAACAGATCCATCCCAAGGCATGTCTTTGGGCCAGTTTGCTCAAATGTTCAGAGATTTACAGcATCGACATTCAGAGGAATATTATGCGTATCATCTAGGCGAATTAGCTCCTGGACTTGTGGGACCATTAATAACATCAGCATTAGCAAGTTGGTCACCTTTGACAGCTCCGAATCAATACATAGATATATTCGATCAATGGAAGGATATCTTAGAGAAACCTCAACAGCGTGGGACTCTAGAAGGTAATAGTATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGGTGCCTGTATTGAGAACGTGTGTTAGTTCATGGAATGTACGTGACTGTGATCCTATTATCAATCTTCTGGAAACCTGGAAGCCATTTCTACCACAATGGATTATGGATAATGTCCTGGACCAGTTAATTATGCCCCGTCTAACCACGGAAGTTAACAATTGGAATCCACTTACGGATACTGTTCCTATACATTATTGGATTCATCCATGGATTCCTTTACTAAATACTCGTCTACATGCTGCAATTTTCCCAATAATTCAAGAGAAATTAGGGGCAGCCCTTAACAGTTGGCATCCCTCTGATCGATCGGCCAAATTGATGTTGAAACCCTGGAAGGACGCTTTACCCGATGGTTCGTTTGTTGCATTCCTTTTGGCTCACATTGTGCCTAAATTGCAACTCTGTATGCAGTCACTCGTTATTAACCCACATGAACAACATTTAGATGCATGGAATTGGGTGATGGATTGGCGGGACATGTTATCAGTAGgaaatttaacattaatactggacaaatatttttttccgaGATGGTTGCAAACACTTGCAATGTGGCTTAATCATAATCCTGATTATAATCAAGTTACTGAATGGTATTCAGGGTGGAAAAGAATGTTATCTGATGAATTATTGGCACAGCCGACGATTAAAGatcATTTTCATAAAGCACTTGAAATGATGAATCGGGCAGTTACAACAGGGCAACAACCGGGAGCTAAGGAATTTGTTTCATATCTTACTAGTATGGAAACAAATAATCCACCTCCGCCACCACCACCACGAGTCGAGGCTTTAGCAGAAGCAGTTCGAACAGCATGTCAAATACCGCAAGGCTTTAAGGATCTTCTAGCAAAGCGATGTGAAGAAAGAGGCATTTTATTTGTACCTGttcttaacaaattttatgAAGCAAAGCAAGTTTATAGATTAGGTTCTAACGGCATGCAAGTGTATTTCGATCGAAGCGTAGTATTCtattcacaaaataattctTCCTGGTTACCTATATCATTAAATAGGTTATTAGATATGGTGTAA
Protein Sequence
MSDQEYEKFEITDYDIENEFNPNRSRRGLSKNQQIYGIWADDSDDEADERPSFKSSKTPKNYSAPIGFVAGGVQQAGKKDKQSGAVKKEENSDDDSETPSASFKVENSSSDSENETRIPRTGFGAQKSRTQSVVTEVTGDIAGLRKSNSQVNSSLMRKGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAASIAVIKEKVESIDEPDKESESKWKKSDMAKKKTRYYYRTVDDVIEKGKRPGVYMGSGPTSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVNMCEQDIISIDRGTRYSQDKGVALKHEERSLNKVLDDEDKQLDNLKEVLDYIDQLTDPSQGMSLGQFAQMFRDLQHRHSEEYYAYHLGELAPGLVGPLITSALASWSPLTAPNQYIDIFDQWKDILEKPQQRGTLEGNSMGIQPYDSLLWHTWVPVLRTCVSSWNVRDCDPIINLLETWKPFLPQWIMDNVLDQLIMPRLTTEVNNWNPLTDTVPIHYWIHPWIPLLNTRLHAAIFPIIQEKLGAALNSWHPSDRSAKLMLKPWKDALPDGSFVAFLLAHIVPKLQLCMQSLVINPHEQHLDAWNWVMDWRDMLSVGNLTLILDKYFFPRWLQTLAMWLNHNPDYNQVTEWYSGWKRMLSDELLAQPTIKDHFHKALEMMNRAVTTGQQPGAKEFVSYLTSMETNNPPPPPPPRVEALAEAVRTACQIPQGFKDLLAKRCEERGILFVPVLNKFYEAKQVYRLGSNGMQVYFDRSVVFYSQNNSSWLPISLNRLLDMV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00853958;
90% Identity
-
80% Identity
-