Msca044493.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanostoma scalare
Gene Symbol
dl
Assembly
GCA_949752695.1
Location
OX456986.1:24826772-24830921[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.16 2.8e+03 0.0 0.3 87 120 23 57 15 62 0.75
2 2 1.7e-74 2.9e-70 237.5 0.0 1 169 64 234 64 234 0.99

Sequence Information

Coding Sequence
ATGCTACAAAATAACGCAGCTATTGGCGGAGCAATGGGTGGTGCAGGTGTACAAGCCATTGATCCAGCCCAACAATCGACGGCCGGCTATAATGGCAATGGGATTATtcaccaacaacagcaacaacaacagcaaactcaacaacaacaacaacagacaaATGCCAAAAATATACGTCGAAAAGCATATGTCAAAATTACAGAACAACCAGCTTGGAAAGCGCTTCGGTTTCGTTATGAATGTGAGGGACGATCGGCTGGATCGATACCGGGCATAAATAGTACGCCGGAAAATAAAACATTTCCCacaatcgaaattgttggctaCAAAGGACGAGCGGTTGTAGTAGTGTCTTGTGTAACAAAGGATCCCCCGTATAGACCACATCCTCATAATTTAGTTGGTAAAGAAGGCTGTAAAAAGGGAGTATGCACACTGGAAATTAATAGTGAAACAATGCGGGCAGTATTTAGTAATTTAGGAATACAATGTGTAAAAAAGAAAGATATCGAATCAGCTCTAAATGCCCGTGAAGATATTCGAGTAGATCCGTTTAAAActGGATTCTCACATAAACATCAACCATCAAGCATAGATCTTAATTCAGTACGGTTGTGCTTTCAAGTTTTTCTTGAAAGTGATGTCAAGGGTCGTTTCACTGTACCACTCCCACCTGTTGTTTCTGAACCAATTTTCGACAAGAAGGCAATGTCAGATTTGGTTATTTGCCGCCTATGCAGTTGCTCTAGTACAGTTGAGGGCGGTAAGGAGATTATTCTTCTCTGCGAGAAGGTTGCCAAAGAGGATATCTCGGTGCGATTCTATGAAGAGCAGAACGGCCATCTTGTTTGGGAGGGTTTTGGTGATTTTCAGCATACGGATGTTCATAAACAAACTGCCATCACGTTTAAAACACCACGCTACAGGACAATGCAGATCAATGAACCGGCTAAGGTTTTTATTCAGCTGCGAAGACCATCGGATGGAGCAGTCAGTGAGCCGCTACCATTTGACTTTCTTCCACTAGAATCAGGTAGGCGTACATTCTGGGCTATccgtaaaaatttaaaacggaAGGCCGCCGACATGGGTATATTTCAGCAAATTCTTAATGAAGATAAAGCAGCCACTTTGGCTGCTCAAGAGCTAGCAATGCCTAAGTATACGGAGGTTGGTGTCCAGAGTGAGGTTATCAATTTGGACACACCATCGGAGGAGGATCATACAAAATCTTTTGAAACCGACGATGAGGAATCGGCTAAACGACGCATGGAAAAGGAAGTTGATAGTATAATTGATGAAAAGGTAAAGGAAATGGAACTCGAGGTTCAGGAATCTGAACCTGAACCGCAAGTAGAACGATATCAAAGCGTTCAGACGCAAACTCAAGATTCGATCGATGATGGTAATAACGACGATGAAGAGTCTATAAAAGAAGATTCAGTGCCACGGAAATTGTCGGCCAACGACAAAATAACCCATTGGCTTAAGTCAAATGAAGAGTTCGTTCAAACTGATGAGAGTGGTTCACCACCGATCAATGAGTCAGCAACTGCTTTGACAGCTTCGACTGTAGTCACTTCTGAAGAAGATAAGACCCTCAATGATTATCTTGATCATTCGGAGGAGCTTGAGGAAATTTATAGTGACAACAAGCTTAGAATCGAAACTTTTAACAACACCCTTATTAATGAACTTGCTAGTTCTTCAGTAGATGGAAGTTTGACAAAGGGATCGATtgcaaaaatggaagttggagaAAGCTTTGATGATGCTGCGACCTACACAAGCCTTGAGATGGCATTCAAGAATCCTTTCCCAATGTCTAGTACTTTGCAGGGTATGATTCATTTGCCTTCCGAACGGCCGGCACATTATGATTCCGTTGAGATTATTGTAAACCCACCAGCACTAGTTATAAGTACTTTGAATATGCCCTCTTTGACAGGCAATAGGTTGAACTTCGTCGGTGATGAGAATTGTCCACCACTTCCACCAAAACGTATACGTAAGCCAGATACACCACCCACCAGTGTTCGAAGCAATGCAACATCTCCGGCTAAACCTCCATCACAGATTATTATTATGAAAACTCCAGATCAGTCACCTCCAACGAAAAGATTGCCTCCAACTCCAAATCACAGCAACATGTTGCGACAAAACAAGAAGCcaggtttcttttcaaaattattttctcGACGAAAGAGCAAAACCGATCTTTCTCAAACTTCATCATCACCTGGGTCGAAAACCGCTAGTCCGATTGGGTCCCGGGAGCCAAGTGTAGCTCATTTCTCACTGAACGATATAAATCGATCATCAGTCCGTTCACTTAAGTCTATTCAGCCGTCCAGTATATCGGCATCGAACAGTCCTACCAATGGTGCGAAGCCCGGTAGAACTGTATCCGGGAAGCCAGTTGGCAGAAGTGTGAGCAGTGTATCCGGCAAGAGACCCCACCTCACTGCTGAAGTCATACACATACCACTCAAAGGTGACTCGGTAAACAGTCTGCCAATGCATGAAGCCTACTCTGACGCAAGTACTGTCACTCTTAGTAACATGCTGGACAGGAAAACCGTCAGTGCCATGCAACTGGTTGACATTCCGATCAATGATGGCAACATGGAACTAGTCGCTATTGCCGATCGACAGAGTTTGAAAAATCTCTGTGAAGGTCAGTATGGTGTTGCTCTCCATCCGGATGTTGATTTGACTGAAGCAGAGCATTTTGCTTTATACACAAGTGTACCACCCAACGCAACAATGAGTGAATTTGACGAAACGTCATGTTATTATGCGCCAGTCGATGCTGGCGAAATTCTCACACCCGAAGAAGTGGCAAAACGACTCACCGAagcgaataaaataaattga
Protein Sequence
MLQNNAAIGGAMGGAGVQAIDPAQQSTAGYNGNGIIHQQQQQQQQTQQQQQQTNAKNIRRKAYVKITEQPAWKALRFRYECEGRSAGSIPGINSTPENKTFPTIEIVGYKGRAVVVVSCVTKDPPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIESALNAREDIRVDPFKTGFSHKHQPSSIDLNSVRLCFQVFLESDVKGRFTVPLPPVVSEPIFDKKAMSDLVICRLCSCSSTVEGGKEIILLCEKVAKEDISVRFYEEQNGHLVWEGFGDFQHTDVHKQTAITFKTPRYRTMQINEPAKVFIQLRRPSDGAVSEPLPFDFLPLESGRRTFWAIRKNLKRKAADMGIFQQILNEDKAATLAAQELAMPKYTEVGVQSEVINLDTPSEEDHTKSFETDDEESAKRRMEKEVDSIIDEKVKEMELEVQESEPEPQVERYQSVQTQTQDSIDDGNNDDEESIKEDSVPRKLSANDKITHWLKSNEEFVQTDESGSPPINESATALTASTVVTSEEDKTLNDYLDHSEELEEIYSDNKLRIETFNNTLINELASSSVDGSLTKGSIAKMEVGESFDDAATYTSLEMAFKNPFPMSSTLQGMIHLPSERPAHYDSVEIIVNPPALVISTLNMPSLTGNRLNFVGDENCPPLPPKRIRKPDTPPTSVRSNATSPAKPPSQIIIMKTPDQSPPTKRLPPTPNHSNMLRQNKKPGFFSKLFSRRKSKTDLSQTSSSPGSKTASPIGSREPSVAHFSLNDINRSSVRSLKSIQPSSISASNSPTNGAKPGRTVSGKPVGRSVSSVSGKRPHLTAEVIHIPLKGDSVNSLPMHEAYSDASTVTLSNMLDRKTVSAMQLVDIPINDGNMELVAIADRQSLKNLCEGQYGVALHPDVDLTEAEHFALYTSVPPNATMSEFDETSCYYAPVDAGEILTPEEVAKRLTEANKIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00187814;
90% Identity
-
80% Identity
-