Basic Information

Insect: Melanophora roralis
Gene Symbol: -
Assembly: GCA_963583895.1
Location: OY757188.1:99564222-99577674[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.6e-06 0.00072 20.9 1.3 1 23 572 594 572 594 0.97

2 18 0.00013 0.014 16.8 0.5 1 23 600 622 600 622 0.97

3 18 5.7e-05 0.0062 17.9 0.6 1 23 628 650 628 650 0.98

4 18 4.2e-06 0.00046 21.5 3.0 1 23 656 678 656 678 0.97

5 18 5.7e-05 0.0061 18.0 4.7 1 23 684 706 684 706 0.99

6 18 0.0001 0.011 17.1 5.7 1 23 712 734 712 734 0.97

7 18 4.9e-07 5.3e-05 24.5 4.3 1 23 740 762 740 762 0.98

8 18 1.8e-07 2e-05 25.8 2.4 1 23 768 790 768 790 0.97

9 18 0.00011 0.011 17.1 6.7 1 23 796 818 796 818 0.97

10 18 0.00018 0.019 16.4 6.6 1 23 824 846 824 846 0.98

11 18 1.6e-05 0.0018 19.6 4.5 1 23 852 874 852 874 0.98

12 18 1.3e-05 0.0014 20.0 7.0 1 23 880 902 880 902 0.98

13 18 9.7e-06 0.0011 20.4 7.6 1 23 908 930 908 930 0.97

14 18 1.1e-06 0.00012 23.4 7.7 1 23 936 958 936 958 0.98

15 18 0.00034 0.037 15.5 9.5 1 23 964 987 964 987 0.95

16 18 0.00029 0.031 15.7 0.5 1 23 993 1015 993 1015 0.97

17 18 0.00041 0.045 15.2 4.5 1 23 1025 1047 1025 1047 0.98

18 18 1.5e-05 0.0016 19.8 1.6 1 23 1053 1076 1053 1076 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.6e-06	0.00072	20.9	1.3	1	23	572	594	572	594	0.97
2	18	0.00013	0.014	16.8	0.5	1	23	600	622	600	622	0.97
3	18	5.7e-05	0.0062	17.9	0.6	1	23	628	650	628	650	0.98
4	18	4.2e-06	0.00046	21.5	3.0	1	23	656	678	656	678	0.97
5	18	5.7e-05	0.0061	18.0	4.7	1	23	684	706	684	706	0.99
6	18	0.0001	0.011	17.1	5.7	1	23	712	734	712	734	0.97
7	18	4.9e-07	5.3e-05	24.5	4.3	1	23	740	762	740	762	0.98
8	18	1.8e-07	2e-05	25.8	2.4	1	23	768	790	768	790	0.97
9	18	0.00011	0.011	17.1	6.7	1	23	796	818	796	818	0.97
10	18	0.00018	0.019	16.4	6.6	1	23	824	846	824	846	0.98
11	18	1.6e-05	0.0018	19.6	4.5	1	23	852	874	852	874	0.98
12	18	1.3e-05	0.0014	20.0	7.0	1	23	880	902	880	902	0.98
13	18	9.7e-06	0.0011	20.4	7.6	1	23	908	930	908	930	0.97
14	18	1.1e-06	0.00012	23.4	7.7	1	23	936	958	936	958	0.98
15	18	0.00034	0.037	15.5	9.5	1	23	964	987	964	987	0.95
16	18	0.00029	0.031	15.7	0.5	1	23	993	1015	993	1015	0.97
17	18	0.00041	0.045	15.2	4.5	1	23	1025	1047	1025	1047	0.98
18	18	1.5e-05	0.0016	19.8	1.6	1	23	1053	1076	1053	1076	0.96

Sequence Information

Coding Sequence: ATGAATACTGATAATGCGATTGTTAATGCAACAACTCCTGGTGAGTCAACGACGGCAGCAACATTATCAAATACAACTACAACAACTGCTGCAGCAGCCACAACATCAAATGGCTACGATCGGCAACAAcatcagcagcagcaacaaaatcGTCAATCGCCtttacaacaacagcaacaacaacaatctcAATTAAATGAGtcGCCTCTAACTGTTTTCCAAACACCATCTAATCAAACAACTCTACGCTATATACCTACGACGAATGTTAATAGCAGCTTGTGTGAAGTTGGTGGTAGTGGAGGGGGCAGTGGCAATATGAGTCGAATATCGGTTTCACCGATTGCCCTAACGACTACAACAACGACATCCACACCACCAGTCACAAATTTAACAACGACGGCAACACCATCATCAATTGCAAATGTAGCCTCTTCCAGTCAAGTTGCTGTTCCACTAAGTACTACTTTAGTTTCAGCTCATAATCCACATTTGCTAAATCGTCATCATCAGCGCCAACATCATCATGGAAATCAAGTTTCGGCCACACCGTTACTGCTTGGTAATTCAAGTCCTTCAATGACTATGTCTACACCTGGAACTATTTTAGCCAATAATCCACAAAATTTGGGCAAATACTGGGTTGTTACAAACCTATATCAGGGTGCGCCTAGTCAAACATCTCAATATAACGAGGGAAGCGTAACGCACACACAAACATCGATACCAGGCTTGCCTTCATCGACATTAGTGCGTGCTATATCCACAACTACGGGAAGCCCATCAGTGGTTACCAAAACTGAGGCAGTTTCTAGCAGTGCGGGAACACTGCAAATATCACAAGCCCAAATGTTAGCACAGGCGGGTATAGGACAGTTGCCAAATGGCACTATTATAACTACCCACgcacagcagcaacaacagcaacaacgaCATGTAACAGAAcatcaacagcagcaacaattgAACATCCATGctttaaataacaacaacgaTAATCgccagcagcaacaacaacatgtAGCTGTTCTTCAAACCGGGGATGTTATTAAGGATGAAAAACCTTTTAACTCAAATGGTAAAATGAATACACCTCAACATCAAATTATAATGCAGCACGTATCAAATGCAGCAACATCGGTTAGTCCGGCTACCCCAGGTGGAACAACTATAACACTGGGAACACCTAAGACAGAAATTAAGGATGATGGTAGCGTAGGCATGAGCGGAAAGTTCCAAAGTGGCTTTGAAATGTATAAAGTTAATATCGAGGATATATCGCAGCTATTTACCTATCACGAGGTGTTTGGAAAATTACACGGTGATGTCATGAATCATCCCCTGGCAGCAGCCCATGCAGCCTTACCAGCAGCTGCTAACAGTAATATTGCGACTGCCGTTTCGGCTACAACCACAAGTGCAGCTGATGGAAATAATACCACTGGAGTTACTGTGGTAGCCAATAGTGTCTCCCTAAGCGAAACTACCAGTAGTAGTACACCTGGTACAGGTGCGATAGTTGCTACAAGTGCAGCTGCTAATCTAACAACAGCTATAGTTACAAACTCTAATACAATAGCAACTGCTACGGCAACAACTGCTGGCGTTGTGCCTACAGGTTTACTAATGCCAAAAATGGAAGGTGGTATTGCAAACATAGACCCTCTTACCGTTACTTTGGGGCCCGATGGAACAGTGGTTTCAACTGGTGAACACGTTTGCGATATATGCGGTAAAATGTTTGCCTTTCGTTATCAGTTAATCGTACATCGTCGTTATCACACCGAACGTAAACCTTTCAACTGTCAAGTCTGCGGTCAGGGGTTTTTTACCTCGCAAGATCTTACGCGACATGGCAAGATACACATTGGTGGGCCAATGTTTACCTGTTTAGTGTGCTTCAATGTTTTTGCCAACAATGCCTCTTTAGAACGACACATGAAACGCCATTCGACGGACAAGCCATTTGCTTGTACTATATGTCAAAAAACTTTTGCCCGCAAAGAACATTTAGAAAATCATTTTCGTTCGCATACGGGTGAAACTCCATTCCGGTGTCAATATTGTGCTAAAACATTTACACGCAAAGAGCACATGGTTAATCATGTACGTAAACATACAGGTGAGACGCCGCATCGTTGCGATATCTGTAAGAAATCTTTTACGCGCAAGGAACACTATGTAAATCATTATATGTGGCACACTGGTCAGACACCACATCAATGCGAAGTGtgtggaaaaaaatatacacgtAAAGAACATTTGGCGAATCATATGCGATCGCATACAAATGATACACCATTTCGTTGCGAAATTTGTGGGAAAAGTTTTAGTCGTAAAGAGCATTTTACTAATCACATATTATGGCATACAGGAGAAACTCCCCATCGCTgtgatttttgttcaaaaacgtTTACACGCAAAGAGCACTTATTGAATCATGTGCGTCAACATACAGGCGAATCACCCCATCGCTGTACATATTGCATGAAAACATTTACGCGCAAAGAACATTTGGTTAATCACATACGCCAACATACGGGTGAGACACCCTTTAAGTGCACTTACTGCACCAAAGCCTTTACGCGAAAAGACCATATGGTCAATCATGTGCGTCAACATACTGGCGAATCGCCACACAAGTGTACTTTCTGTCCAAAAACGTTTACGCGCAAAGAACACTTAACGAATCATGTGCGCCAGCATACCGGCGAGTCGCCGCATCGTTGCAGCTATTGCAAAAAGACGTTTACACGTAAAGAGCATCTTACGAATCACGTACGCTTGCATACCGGCGATTCGCCGCACAAGTGTGAATACTGTCAGAAGACCTTTACACGCAAGGAACATCTCAACAATCATATGCGTCAGCATTCTAGTGATAATCCGCATTGTTGCAATGTCTGCAACAAACCATTTACGCGCaaagaacatttaataaatcACATGTCACGCTGTCATACAGGTGACAGACCATTTGCCTGTGAAACATGTGGAAAATCATTTCCGCTTAAGGGTAATTTACTCTTCCATCAACGTAGTCATACTAAGGGTCAGGAAATGGAAAGACCATTTTCATGCGAAAAATgtccaaaaacttttatatgcaAAGGTCATTTAGTCTCCCATATGCGTTCTCACTCAGGCGAAAAACCACATGCTTGTACATTATGCAGTAAAGCATTTGTGGAAAGAGGCAATTTAAAGCGTCACATGAAAATGAACCATCCAAATGCCCCAATGCCACCACCCCCAGTGCCACATCCAGTTATACCAGCAGGAGTTTTACCTCAGATCAAACAGGAAATTAAACCAGTTATTAGTGAGATTGgtttttatcAGGGAACTGTGCCCAAGTTCCTGTAA
Protein Sequence: MNTDNAIVNATTPGESTTAATLSNTTTTTAAAATTSNGYDRQQHQQQQQNRQSPLQQQQQQQSQLNESPLTVFQTPSNQTTLRYIPTTNVNSSLCEVGGSGGGSGNMSRISVSPIALTTTTTTSTPPVTNLTTTATPSSIANVASSSQVAVPLSTTLVSAHNPHLLNRHHQRQHHHGNQVSATPLLLGNSSPSMTMSTPGTILANNPQNLGKYWVVTNLYQGAPSQTSQYNEGSVTHTQTSIPGLPSSTLVRAISTTTGSPSVVTKTEAVSSSAGTLQISQAQMLAQAGIGQLPNGTIITTHAQQQQQQQRHVTEHQQQQQLNIHALNNNNDNRQQQQQHVAVLQTGDVIKDEKPFNSNGKMNTPQHQIIMQHVSNAATSVSPATPGGTTITLGTPKTEIKDDGSVGMSGKFQSGFEMYKVNIEDISQLFTYHEVFGKLHGDVMNHPLAAAHAALPAAANSNIATAVSATTTSAADGNNTTGVTVVANSVSLSETTSSSTPGTGAIVATSAAANLTTAIVTNSNTIATATATTAGVVPTGLLMPKMEGGIANIDPLTVTLGPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCPKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEIKPVISEIGFYQGTVPKFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236968;
90% Identity: -
80% Identity: -