Mqua059033.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- -
- Assembly
- GCA_949320155.1
- Location
- OX439485.1:58151330-58181971[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-10 3.1e-07 32.1 0.0 1 38 524 562 524 567 0.89 2 4 6.5e-13 9.9e-10 40.1 0.1 2 39 579 616 578 619 0.94 3 4 2e-17 3e-14 54.5 0.0 1 45 633 678 633 678 0.98 4 4 4.5e-19 6.9e-16 59.8 0.0 1 44 685 729 685 730 0.96
Sequence Information
- Coding Sequence
- ATGTCGTGCTCTGTGTGTCGtgATGGCTGCGCTGAAGAGCAGGAGCAGCCGAAGCAGCTACTTACCAATCGTAATCGACAAAACGACACAGTCAGACATTTGGACATTATTGCTCAGAACCATGGGCTATATCAGGGCCGGCCGCTGCCATTAGAAGCGAGTTGGCCTGGCCAACCTATAACAAGGGAATCAAATTGTCTGGGAAGAAGACGAATATTAGATTTGTCTTTTGGTCTCCTGCGGACCGCTGAGCAGTTGAAAATCAAAGGGCTTTGCGAAACAGCCGAAAGTGTTGATGAGGCAGAAGCAGCAACAGCCACCATCACATTATCAGAAAATATAACACAGACGGTTGTTGGAAATATTGTGAATTCATCACAGGTTGCTACCCCAACGGCCACACCGACCCCACAACTACGAAAATCACGGGTCAGAAAACGTTCAAAGTCTCCGGACACGAATCATCAGCAACAtcagcagcaacagcagcaacacCTACAGCAGCAGCACCAGcaacaacatcagcaacaacaacaacaccaacatcatcaacagcaacaacaaacaATATTAAGTCAGAATCTTAATACAGCTTCAATAGTTAGTCTGCAACAGACCTCGTCCGGTAATTATATACCGGTATCGGGTGGACAGACGATAACGACGACAGCTGTTAGCCAACACAGCCCTGAAGATTCGAATTCGGATAAGCCAAGTGCTCAGAAAATTTGTAAAACTGAATCATCTAACTCACCGGCATCGAATAATGGCAGTGTAACTGTTGCACCAGGAACAGCTATTGTAACACAAATCGTTGTTGCCCGAGACGTTAAAGATAATAACAAAATGACCAGTATAGGAATGGGAATgaacGGAGCTCTCCTTGGAGTACCAATGGGATTCTTAGATTTTGCACCCGAACCACCAGCACCATCGGCAACACCTGTAACAGTGACGGAACACGTCGATTTGTCGTGTAATCCAAGTCAGGACACCAGAGATTTATCAAATCCCACCGAAGCGCTCGACATTGACAATCATTTAGCACAACATATGATCCAACGGCTTGATCAATCACCGATGCATACAATCCACCATCAGTCGTCAACTGGCGATGAGagtaattcaaatttaattcagCATATTAAGAGTGAAGTTATTGAGGTGAAGCATcatcatcagcaacaacaacagcagttGCATGCGCAGACCTTATCACAGCAAGGACAATCACAGCAAcaccaacaacagcagcaacaccaacagcagcagcaacaacaacagcagcaacaacaacagcagcagcaacaacatcaGCAGCATCAAGATATTTCTGGGGCAACTGTTATGGAAATTGATCCGAGCAATATCAAACACGAACCAGGGATGATTATCACACCGGAAATTGTTACAATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGTGAGGATTCATTGATGATAGCGAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAATTTGGACCAACCGCATGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCATCAGTGACGTATGGCATCCCATCGACAACATTGTGGCAACGGGCCCATCGCATGGGCATCGAAACACCCAAAAAGGAAGGCGGTACCAAATCATGGAATGAAGATTCTTTAAACAGCGCATTGGAGGCATTAAGAACTGGTCAAATATCAGCAAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATATAAGATTGCCCGACGTGAGGGTATAAGATTGGCAGCACCATTTAATGCAGCGCCAACAACATGGACGCCTGAAGACTTGGAGCGTGCATTGGAAGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCAGAATTTGGTATACCAACAGGCACACTCTATGGTCGCTGTAAGCGAGAAGGTATTGAGCTGTCCCGCTCTAATCCAACACCATGGTCAGAAGATGCTATGAATGAGGCATTGAATTCTGTTAGAGTGGGACAAATGTCTATAAATCAGGCGGCTATTCACTACAACCTTCCATATAGCTCTCTGTATGGCCGTTTTAAACGCGGCAAATATGATATATCCAATACGAGTGCAACATCAATCAATAACACATCAGGCAACACAAGCGGCAGCATTGAAATAATTGAACATAGTCCAGAAAATTCGTTGCACATGTTTCAGCAACAGTTCCAATACAGTCCAGCGCCGCAGTCTAATCACCAGACccaacagcaacagcagcaacaacaacaacagcaacaacaacagcagcagcagcagcaacaacagcagcagcaacaacaacatcaacaacaccaaccacaacaacaacaacaacacatcCATCAACAAGTTGTACACATTCAACACCAACAAACAccacaacaacaccatcatcaacaacaacatatccaaCAACAAGATGTTGTTACCTCAACAAGTCAGGTTCATACCCAAGCTGGACAAATCCAACATATTTATCACAGCACCCCTGAGAGGAGTTGA
- Protein Sequence
- MSCSVCRDGCAEEQEQPKQLLTNRNRQNDTVRHLDIIAQNHGLYQGRPLPLEASWPGQPITRESNCLGRRRILDLSFGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQTVVGNIVNSSQVATPTATPTPQLRKSRVRKRSKSPDTNHQQHQQQQQQHLQQQHQQQHQQQQQHQHHQQQQQTILSQNLNTASIVSLQQTSSGNYIPVSGGQTITTTAVSQHSPEDSNSDKPSAQKICKTESSNSPASNNGSVTVAPGTAIVTQIVVARDVKDNNKMTSIGMGMNGALLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKHHHQQQQQQLHAQTLSQQGQSQQHQQQQQHQQQQQQQQQQQQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNTSATSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQQQQHQQHQPQQQQQHIHQQVVHIQHQQTPQQHHHQQQHIQQQDVVTSTSQVHTQAGQIQHIYHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314183;
- 90% Identity
- -
- 80% Identity
- -