Mper022321.1
Basic Information
- Insect
- Melanchra persicariae
- Gene Symbol
- Lztr1
- Assembly
- GCA_947386135.1
- Location
- OX376661.1:15191176-15204318[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.2e-15 1.1e-12 48.5 0.0 4 109 365 501 362 502 0.86 2 5 1.9e-08 6.7e-06 26.7 0.0 9 44 598 632 593 646 0.86 3 5 5e-05 0.018 15.7 0.0 24 44 685 705 683 719 0.84 4 5 5e-05 0.018 15.7 0.0 24 44 758 778 756 792 0.84 5 5 5.6e-05 0.02 15.5 0.0 24 44 831 851 829 865 0.85
Sequence Information
- Coding Sequence
- ATGAATCAGAATCTGGGGAAGATGATAACAGAGCAGCTCCGCAATCCCAACGAGTTAGACATCAGCCTGAGGATGGAGTTCGGGCCTTTTGAGACAGTACATAAGTGGAAACGAATGTCTGAGTGCTACGAGTTTGTTGGTGCCAGGAGGAGCAAACATACAGCTGTGGCCTACAAAGATGCGATCTATGTATTTGGGGGTGACAATGGCAAGTCCATGCTAAACGATTTGATCAGATTTGACATACGGGAGAAATCTTGGACGAAGACTGGGTGCATGGGAGTCCCGCCCGCACCGAGGTATCATCATTCTGCTGTGGTGCATCGTTCATCAATGTTCGTGTTCGGTGGCTACACGGGCGACATCCTGGCGAATTCGAACCTGACCAACAAGAACGACCTCTTCGAGTATAAGTTCCCCAGTGCACAGTGGGTGCAATGGAAATTTACCGGCCAGGAGCCTGTGCCCCGGTCGGCACATGGCGCCGCTGTCTACGACGACAAGCTGTGGATCTTCGCCGGGTACGACGGCAATGCAAGGCTCAACGATATGTGGACGATCAACTTGCTGGGAGAAAACCACCAATGGGAGCGAATAGAGCAGAAGGGTCAGTGTCCCCCGACGTGCTGCAACTTCCCGGTGGCTGTCGCGAGAGGCAAGATGTTCGTCTTCAGCGGTCAGAGCGGCGCCAAGATCACTAATGCGTTATTCCAGTTCGATTTCGAATCTCATACCTGGAGCCGCGTGTGCACGGAGCACCTGCTGCGCTCGGCGGGCGGTGCGCCTGCGCGGCGCTACGGCCACGTCATGGTGGCGCACCGCGCGCACCTCTACGTGTTCGGCGGCGCCGCCGACAACACGCTGCCCAACGACCTGCACAAGTACGACCTGGACACGCAGATATGGTCGGTGGTGCTGGCGGCGGGCGAGTCGCAGGTGCCCTCGGGGCGGCTGTTCCACGCGGGCGCCGTGGTGGGCGACGCGCTCTACATCTTCGGCGGCACCGTCGACAACAACGTGCGCAGCGGCGAACTGTTCCGCTTCCAGTTATCAAACTACCCACGCTGCACACTTCACGATGACTTCGGTCGAATCTTGAAGTCACATCAATTCTGCGACGTACAAATCTTAGTGGGGCCGGAGAAGACGTCTATATTGGCGCACCAGGCCATATTAGCCGCCCGGTCGCAGTTCTTACGAGCTAAGATCAAGGAAGCTCGAGATGAATTAACGAAGCGCATTGCGGCGGGCGAGGAGGAAGCTTCAGAAGTATGCTCGTACAAGACGCCGCCGCAGCTGTGCGTGTTGCTGCCCGAAGCGACGCCCGAGTCCTTCAACATGGTGCTCAATTACATATACACCGACCGAATAGACCCCACTGAGAAAGACGAGGACCCCGCGTCGCCGGCCACTGTGCTGCTGGTGATGGCGGTGCTACGCCTGGCGCTACGCCTCAACATCCCGCGCCTGCGCGGCCTGTGCGCGCGCTTCCTGCGAGCTAACCTCTGCTACGGCAATGTGTTGCAGGCGCTGCACGCCGCGCACCACGCCAACCTCACGTGCATCAAGGAGTACTGTCTGAGATTCGTGGTGAAAGACTATAACTTCACTCCCATAGTGATGTCGAAAGAGTTCGAGGAGATGGAACAGAGTCTGATGGTGGAAGTGATCCGGCGACGCCAGCAGCCGCCTCCCAAGCAAACCAACGCGGTTGTTCAACAGGAGTATGATGAAGAAATTATTGGCACGACTCTGGAACAAGATATGTGCGTGCTGCTGGGCGGCGGCGCCGAGCTGGCGGACGTGCGCCTGCGCGTGGGCGCCGCGCACCGCCCCGCGCACCGCTCCGTGCTGGCCGCGCGCGCCGCCTACTTCGAGGCCATGTTCCGCTCCTTCTCCCCGCTCGACAACATCGTCAATGTAAGTCTTGTACTCACCCCCGCCCCCCGCGCACCGCTCCGTGCTGGCCGCGCGCGCCGCCTACTTCGAGGCCATGTTCCGCTCCTTCTCCCCGCTCGACAACATCGTCAATTCTTGTACTCACCCCCGCCCCCCGCGCACCGCTCCGTGCTGGCCGCGCGCGCCGCCTACTTCGAGGCCATGTTCCGCTCCTTCTCCCCGCTCGACAACATCGTCAATGTAAGTCTTGTACTCACCCCCGCCCCCCGCGCACCGCTCCGTGCTGGCCGCGCGCGCCGCCTACTTCGAGGCCATGTTCCGCTCCTTCTCCCCGCTCGACAACATCGTCAATTCTTGTACTCACCCCCGCCCCCCGCGCACCGCTCCGTGCTGGCCGCGCGCGCCGCCTACTTCGAGGCCATGTTCCGCTCCTTCTCCCCGCTCGACAACATCGTCAATGTAAGTCTTGTACTCACCCCCGCCCCCCGCGCACCGCTCCGTGCTGGCCGCGCGCGCCGCCTACTTCGAGGCCATGTTCCGCTCCTTCTCCCCGCTCGACAACATCGTCAATTCTTGTACTCACCCCCGCCCCCCGCGCACCGCTCCGTGCTGGCCGCGCGCGCCGCCTACTTCGAGGCCATGTTCCGCTCCTTCTCCCCGCTCGACAACATCGTCAGTGTAAGTCTAGTTTGTAAAACCCATCTTTTCTCCGCAATGGGAGGGCATTGGGGGAACGGGGGTGCTATGTGGGACTCCTCGGGCTGA
- Protein Sequence
- MNQNLGKMITEQLRNPNELDISLRMEFGPFETVHKWKRMSECYEFVGARRSKHTAVAYKDAIYVFGGDNGKSMLNDLIRFDIREKSWTKTGCMGVPPAPRYHHSAVVHRSSMFVFGGYTGDILANSNLTNKNDLFEYKFPSAQWVQWKFTGQEPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTINLLGENHQWERIEQKGQCPPTCCNFPVAVARGKMFVFSGQSGAKITNALFQFDFESHTWSRVCTEHLLRSAGGAPARRYGHVMVAHRAHLYVFGGAADNTLPNDLHKYDLDTQIWSVVLAAGESQVPSGRLFHAGAVVGDALYIFGGTVDNNVRSGELFRFQLSNYPRCTLHDDFGRILKSHQFCDVQILVGPEKTSILAHQAILAARSQFLRAKIKEARDELTKRIAAGEEEASEVCSYKTPPQLCVLLPEATPESFNMVLNYIYTDRIDPTEKDEDPASPATVLLVMAVLRLALRLNIPRLRGLCARFLRANLCYGNVLQALHAAHHANLTCIKEYCLRFVVKDYNFTPIVMSKEFEEMEQSLMVEVIRRRQQPPPKQTNAVVQQEYDEEIIGTTLEQDMCVLLGGGAELADVRLRVGAAHRPAHRSVLAARAAYFEAMFRSFSPLDNIVNVSLVLTPAPRAPLRAGRARRLLRGHVPLLLPARQHRQFLYSPPPPAHRSVLAARAAYFEAMFRSFSPLDNIVNVSLVLTPAPRAPLRAGRARRLLRGHVPLLLPARQHRQFLYSPPPPAHRSVLAARAAYFEAMFRSFSPLDNIVNVSLVLTPAPRAPLRAGRARRLLRGHVPLLLPARQHRQFLYSPPPPAHRSVLAARAAYFEAMFRSFSPLDNIVSVSLVCKTHLFSAMGGHWGNGGAMWDSSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00449289;
- 90% Identity
- -
- 80% Identity
- -