Basic Information

Insect: Meiosimyza platycephala
Gene Symbol: -
Assembly: GCA_963662105.1
Location: OY759209.1:92222526-92231916[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.039 3.7 9.0 0.9 1 23 1516 1539 1516 1539 0.94

2 12 0.0026 0.25 12.7 4.9 2 23 1728 1749 1728 1749 0.97

3 12 3.7e-05 0.0036 18.5 0.2 3 23 1757 1777 1755 1777 0.98

4 12 9.6e-07 9.2e-05 23.5 3.6 2 23 1784 1805 1783 1805 0.97

5 12 7.6 7.3e+02 1.8 0.4 5 23 1818 1836 1816 1836 0.96

6 12 1.9 1.8e+02 3.7 5.4 3 23 1843 1864 1841 1864 0.93

7 12 0.02 1.9 9.9 0.1 2 23 1875 1895 1874 1895 0.96

8 12 2.8e-05 0.0026 18.9 0.8 1 19 1901 1919 1901 1923 0.94

9 12 8e-06 0.00077 20.6 1.2 1 23 1931 1953 1931 1953 0.98

10 12 0.00014 0.014 16.6 7.6 1 23 1959 1981 1959 1982 0.96

11 12 0.0013 0.13 13.6 6.5 1 23 1987 2009 1987 2009 0.98

12 12 0.0024 0.23 12.8 6.0 1 23 2015 2037 2015 2038 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.039	3.7	9.0	0.9	1	23	1516	1539	1516	1539	0.94
2	12	0.0026	0.25	12.7	4.9	2	23	1728	1749	1728	1749	0.97
3	12	3.7e-05	0.0036	18.5	0.2	3	23	1757	1777	1755	1777	0.98
4	12	9.6e-07	9.2e-05	23.5	3.6	2	23	1784	1805	1783	1805	0.97
5	12	7.6	7.3e+02	1.8	0.4	5	23	1818	1836	1816	1836	0.96
6	12	1.9	1.8e+02	3.7	5.4	3	23	1843	1864	1841	1864	0.93
7	12	0.02	1.9	9.9	0.1	2	23	1875	1895	1874	1895	0.96
8	12	2.8e-05	0.0026	18.9	0.8	1	19	1901	1919	1901	1923	0.94
9	12	8e-06	0.00077	20.6	1.2	1	23	1931	1953	1931	1953	0.98
10	12	0.00014	0.014	16.6	7.6	1	23	1959	1981	1959	1982	0.96
11	12	0.0013	0.13	13.6	6.5	1	23	1987	2009	1987	2009	0.98
12	12	0.0024	0.23	12.8	6.0	1	23	2015	2037	2015	2038	0.96

Sequence Information

Coding Sequence: ATGGTGGAGAACATTCAGTGTCCTGTGTGCACTCTATTCCTGCACGCAGGAATGGATTTATCTGATCATTTGGAAACACATCCAAAAGAGCAAGTGATTAAAGCGCTTGTGCAAATGACAATCACTGGTGGTGGATCTGGGAGTAGCGGAACTAGTGCCGCTTTGACCGATGAAGAGAAACCGAATGTTGAGACAATTTCTAAGGCGAGAACAAACGAAAAGGAACATGAGATAAGTACAAACTCCACTACCAATTCCTCTTCGCCCTTACCAACAACTACTTCAGCACACAATAGCCTGAATTTGTCATTTTGCGCACCACATAAGCAAGAAAATATTGGTTTTGTTACAACTCATAAGACATCGGGAAAACACATTTTCAATCAACAAAATGTTACATCCTCGCCTGCATATCAAAAAAGTGGCGAACCTCATGGCACCAATTCCGGTTGCGTCAATGATGTTGGCGTTGTAAGAGATATCAAACAAATGCCAACTGATTTTAGTACATATTCGAATCGTTATCAACATCAACaccaacatcagcaacaacaaacatcGAGTCAACAACATCTTCAACATGTGGCTGATGCACATCAACGACCACCACCACCTCCACCGCCACCACAGCTTCCACATCAAATCACACCGTTGGCAAGCAGCGGAGGATCTCATAGCTTTCAGGCGTTGCAACAGCATCAGCCGCCAATGCTTGCTCATCAGCATCAAAACTCTgcacatcatcaacatcataCACATCAAGttcagcaacatcaacaacaaaacCACCATAGGCAACAACATACTTCTATGGCAATAGCCCAGcagcaaaacttaaaaataatatattcgTCCACAttaccgccaccaccaccactacaGctcTTTTCCTATCAACCTCCAACGCAACCCCAACACCAAAAACCACCACCAGCATATGGAACCGCCATTAGTCAAATACGATCTCAACACAACCAAAACAAGCAAACTCTACAACAACATCAGATGCAACAACGCTCAGCACCTTTGTCAGCTATAGCATCAACTTCAAAACATGCGACTCTGAAACAGAACTTGCCTTCCAACCTCTTAGCCGCTGCAGCAACACAACAGAAGCAATATCAATCACAACATCATGAGACTGCACAGCAGCAAACTCAGCAACATCTCGTCAAAAATTTTGCTGCTAATACTTCCTTACCGAAAACAACGGGAGCATATCAACAACGCGTTCAGCCACCAACAACTGCATTACCACTAACTGTTGTTGCAGCAGCGGGCAGTCGTCAATCAGAATCTCCATATCCTGCAATACTTACAGCAGCTATAGCTTCACCTTCTTCCTCTTCATCGGTTTTGCGTTATGCAGAATCGCCAGTTACTGTACATTATTTGGAACGCGATAATGGTGACTTTATAGTGCAAGAAATCCCAAAACATATTGTTGAATGTGTTGAAAAAGACAATGGAGAATTTTCCGTAATTGAGCGCATTTATCAGTCTCCGCCAAGTGTGCTGCATAtacatgatgatgatgaagacgACGATATTGAAAATGGAAATGATAATACTAGTAATGAGGATGTTAAATTAGATGTAAATGATGAAACTAACAAATCGCTAAAAGATGATgaaaataacaaagaaaaacacgaAGATGATGAAGATTTTATGAGCGCTGACAGCAACAGTGATATGGACGATTCTTCGGAGAAATCATTCTCTAAAACAAGTGGTAAGCTGAGTAAAGATTATTCGGCAAATACCACACCACTAGAACAGACTGCAGTCAATTCTTCTATATGTAGTGAAATAAGCGTTGTAAATTCCAATTCAAACTCCAACTTCTCCACAACCACCAATAATAGTTCAGGTCTTACTACACGTAAGAAATCTTCTAAAAATACAATTACCGTCTTAAGTGATgtgcaattgaatttaaatgaatatttagATTTGGTTGGTAACATAATTGCATCGAGtaaaattgcacaaaatcgaAATACGTTTTCTGCTTCTACTTCTGCTTCTGCTTCTGCAACACCATTGcttaaaatcgaaaaagtcgaaCCCTATGATGAATATGAACAATATGAGATGTCAGAGAATATGCCCGTTGTAGAGAGTGAAATCAATGTAGATAGGCAAATGGAAGCTACCAGTTTAATTGAACCACCTAAAACCACCAATAACAAAGATAACATAACTGAGACTGATgaattaattgcaaataaatataGTAATAAGTCTTCtccaaatgaaataaatactAACAAAGTCGTCACTGCTACCCCTGAAGAAAACAAGCTGAACGAAATCAAAAATGTTGCAGCAATATATTCCAGTCATGCAACAAGCGTTATACGAATGGCAACAACCAATACCGCTAGTCAACAATTTATGAAAGAAGCTGAACTTCTTCCCCCCAGTGTTGTGGATATTGTTGTAGAgaagaaaattataaatgacTTACAACATTCAAATGATATACAGCAGGAACAACGTCAAGATGCCGAAGATTTGtcccaaacaaaaattaaacacgAGGTGAAAACTGAAGATATTCTACTGAAAATTCCACCACCAATTCCATTACCTCCGTTAAAGAAGGGTCCAAAGAAGCTTGTcataaaaccaaaatcaaaCAAGACTGACGCTAACAATATACCAGCAGTGGCAAAAATAGctgatgaaaatttaatttctgatGAACAGCCAACAACTTCagcaaaagcacaaaaagtaatTCAGCTcgataaaatagaaaaaaataagacaaTGGAACAGACTGCATTGCAACAAGATACTGAAACCAATGTTATCGTTAAGAGTGAGTATTCGATAACCGAACAAACCAGTATTTTGGAGCAACATTTAAAACTGGGCTTTCAGCAACTTGAGCTAAAAGAGGAACAACCTTCAGCACGTAATGATACAATCTTCTCACTAGatagtcaaaaaattaaaaacgaaagcGATGAATTCAATGATgtgccaaaaatttataccgAATCAAATGAAGAACATTCTTCGTGCTTAAATATGCCAAATGTCACGGAAGATGCACGTGTGCTATTGAATTTTGCGAACTCTAAGAAAAGCAAAACTGATGCCACTTCAACTACAGTTTCATTTCCATCGTCTAACTCAATTTTTGCAGGTTCATTacttgaaaaatcaatttcaactAATGCTACTTGTTCATCGTCATCAACGCAGAACACAGCAGGAATAACAACTACGGTAGTAGCcgcaaatttttcaacatctaATTCTGCTTCAGCTGCTGCTTTGTCAACTCTTCGATGTGATGATGAGTTTATTGTTCCCGATGCCACAGATGTTCAAGAGATTGTTATTTCATCATCCTATTCATCACAGTCTGCATCAGATATTGCACTAAATAATTACAATAATGTGACGATGACGGATCAACATCAGCACAACTTCTCAGATTATCCTTTTAGTTTCCTTTATGGTGGTGGTAGCGTAGCTCAACAAATTGAGACAAAGGGTAATTTTTCTCCAATATATCAGCATCAGCCACATGATGCCACTACAGCTGCAACACTTGCTTCGGGTAGTAATTCGGCCACAATTGAAGATTTTACACCAGCACAGAGCAGTAGCCACCAACATCAGCAACGTTATCATCATCATGCAACAGCAGGAGCTGGACAATGGTATCATGCGGTTTCAACTTCTAATGCCGATTTTGAGGCTGCTTTGGCTGTCGATTGTACGGATACTGACAATGATGTTGGTAAATATTTAGACTTGGACGCTTGTAAGCGTGACAATATAACTGCAGCTCAGGCGGCGCCGTGTTCTTCATCGTCTTCATTTGCTGCGGCAACAGAGAGTAGCCTTGCAGGTTGTACCACAGATGCTTTAAATATTCGAACTGATGAAAAGATGCCAGCTAAAGGCGAAATATCGGAACAAGAGAGTAATTGTGATATTGAAAATTCATGGAGTCAACCTatGTATGGAGATATTCCAGCTCGTTTCTTTAAGACATCATTTCCTGGGCTTTTTCCTCAGGAAAATTGGAATGGTGTAGAATATTTTACAGTTCATGATTTAAGCGCATCAGCAGGTACTACGAGTGCCAGTAACAGAGCTACTAAAAGttttgattttcgTCTTCCTTTGGAAGCGATCACCACATCCTCAGCGACCGCTGGCAgcttgcaacaacaacaatgcgcTGAAAATCTCCCATCTTCGTCAAAAAAGAAGCGAAAGCGTGAATCAAATGTTGCTAAAAattcaacagcaacatcaaGAAAAGTTGCTGCAACAGTTACTTCACATGATTTACTTTTACAACAACAAAGGCAAcaaatacaacagcaacaacatcagcagcaacagcaacaacagcagcagcaactgcaacTATATCATCAGCAACCAACAACATCTGCAGCAATATTGGCTGGTCCATCGACTGCTGCCGCTTCTTCTTCTGCTGCTGCAACTTCTccaattgctgctgctgcagcagcagTTGTTGTTATACATAAACAACGTAAAAAGATCTATCAATGCGCTCATTGCCCATTACAGTTTACTAAACTGAAGGATCGTAATTTACACATGATCGCTCTACATAATTATATTCGTCAAAATCGTCGTCTTGTATCACTGCATACTACAGCTGTGACAATAACTACAGCTACTGCAACAGTTACTTCTGCTGAAAACTTGGCAATAATACCTTTTAATGGAGCCAGTGGCAGCTCTAACATTTTAACCATTCCACCATCTAATTTTGTTGAAAGTATAGAAGACTCAAAGCAAGGTATCATCAAAATAGAGATGGAAAATGCAGAGCAAGCAATTGCGTCACTGTCAACAGTTGAAACTATTACAGCAAAATCTGAGCTCGTGGATGAAAAAGATAATTTGGCATTAATGCCAACAACCAGTACACCCAACGCAGTTGTTGATCTTAAACCACCAACCGTTCGTCCTTTGGCTTTGACACATGCGACTAAACTTGCTACACTTTACCGTATGTTGGTTTCATTTAATATATCCACCTTGAAGCAAAATTCAAATCTGTCTGAAGTAGATGAAAAACTTATGGAATCATATATTTTCTTCTGCTATATTTGTCGTCAACACTTTAACACTGTGAAGTTTTATGATGCCCATTTGACAGAACATCCTGCTGAATGTTTTACATGCGGAAAGAAATTTCATCGTTGGAAGAACTTTTCGCTGCATTTAAAACGACATTTAGGCTGGAAAGAATTTGGTTGTAGTGTATGCGACAAAAAGTTTGTTGTGCGTAGCGCACTGGTAGAGCATATGAGAATGCATACCGGATTAACACCActgaaatgcaaaatatgcGgCAAAAACTTCAAGCGTTATTCAAATTTAACTCAGCATCGCAAACGCCATGGCAGGCAAATTTTACGTAAAAAAGAATTTGTCTGTCACTGTGGTGAAGTACTACCATCAAAAGCACGCTTTTTGTGGCATAAAGAGACACACGATGCTAAACCAAAATGCTGTCCCTATTGCTGCGATCGATTTGTACATGCAAACTCTTTGCGTCGCCATATACGCCTTGCCCACTCAGACAAATTTGATTACACCGAACCCATGGAGTGTCCCATGTGCAAGCAGGTCTTTGCCAAATCCTCCATAAGAGCACACATGGCAACGCATTCAATGGATACGCAACACGATTGTCCAATTTGTAATAAATCTTTCTCCACcaaatggaatttaaaaatacattctTGGGTGCATGCCAACCGCACCGCTAAGCCCTTTAAATGCGAACACTGCCCAAAGGCATTTGTGCGTGAAGTGGACTTCAAAAATCATATGAATGCACACAAACAGATCAAACCCTATACGTGTGAGTATTGCGGTTGCAAGTTTATACGCAAATACAATTACATGCGTCACCGGCGCGAGCACCACGGGAATAAAAAATTCACCTGCGACCTTTGCAAGAAATCGTTCCATCGCCACTACTATTTAATTGAACATAGACGTATTCACACCGGTGAACGACCGTTCCAGTGCACGATTTGTGGAAAGAGTTCAACAACAAAGACTAATCACAACAAGCATCTAAAAATACACCATTCGCGAGATCCTTTTACAGTTGAGGCATAA
Protein Sequence: MVENIQCPVCTLFLHAGMDLSDHLETHPKEQVIKALVQMTITGGGSGSSGTSAALTDEEKPNVETISKARTNEKEHEISTNSTTNSSSPLPTTTSAHNSLNLSFCAPHKQENIGFVTTHKTSGKHIFNQQNVTSSPAYQKSGEPHGTNSGCVNDVGVVRDIKQMPTDFSTYSNRYQHQHQHQQQQTSSQQHLQHVADAHQRPPPPPPPPQLPHQITPLASSGGSHSFQALQQHQPPMLAHQHQNSAHHQHHTHQVQQHQQQNHHRQQHTSMAIAQQQNLKIIYSSTLPPPPPLQLFSYQPPTQPQHQKPPPAYGTAISQIRSQHNQNKQTLQQHQMQQRSAPLSAIASTSKHATLKQNLPSNLLAAAATQQKQYQSQHHETAQQQTQQHLVKNFAANTSLPKTTGAYQQRVQPPTTALPLTVVAAAGSRQSESPYPAILTAAIASPSSSSSVLRYAESPVTVHYLERDNGDFIVQEIPKHIVECVEKDNGEFSVIERIYQSPPSVLHIHDDDEDDDIENGNDNTSNEDVKLDVNDETNKSLKDDENNKEKHEDDEDFMSADSNSDMDDSSEKSFSKTSGKLSKDYSANTTPLEQTAVNSSICSEISVVNSNSNSNFSTTTNNSSGLTTRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKIAQNRNTFSASTSASASATPLLKIEKVEPYDEYEQYEMSENMPVVESEINVDRQMEATSLIEPPKTTNNKDNITETDELIANKYSNKSSPNEINTNKVVTATPEENKLNEIKNVAAIYSSHATSVIRMATTNTASQQFMKEAELLPPSVVDIVVEKKIINDLQHSNDIQQEQRQDAEDLSQTKIKHEVKTEDILLKIPPPIPLPPLKKGPKKLVIKPKSNKTDANNIPAVAKIADENLISDEQPTTSAKAQKVIQLDKIEKNKTMEQTALQQDTETNVIVKSEYSITEQTSILEQHLKLGFQQLELKEEQPSARNDTIFSLDSQKIKNESDEFNDVPKIYTESNEEHSSCLNMPNVTEDARVLLNFANSKKSKTDATSTTVSFPSSNSIFAGSLLEKSISTNATCSSSSTQNTAGITTTVVAANFSTSNSASAAALSTLRCDDEFIVPDATDVQEIVISSSYSSQSASDIALNNYNNVTMTDQHQHNFSDYPFSFLYGGGSVAQQIETKGNFSPIYQHQPHDATTAATLASGSNSATIEDFTPAQSSSHQHQQRYHHHATAGAGQWYHAVSTSNADFEAALAVDCTDTDNDVGKYLDLDACKRDNITAAQAAPCSSSSSFAAATESSLAGCTTDALNIRTDEKMPAKGEISEQESNCDIENSWSQPMYGDIPARFFKTSFPGLFPQENWNGVEYFTVHDLSASAGTTSASNRATKSFDFRLPLEAITTSSATAGSLQQQQCAENLPSSSKKKRKRESNVAKNSTATSRKVAATVTSHDLLLQQQRQQIQQQQHQQQQQQQQQQLQLYHQQPTTSAAILAGPSTAAASSSAAATSPIAAAAAAVVVIHKQRKKIYQCAHCPLQFTKLKDRNLHMIALHNYIRQNRRLVSLHTTAVTITTATATVTSAENLAIIPFNGASGSSNILTIPPSNFVESIEDSKQGIIKIEMENAEQAIASLSTVETITAKSELVDEKDNLALMPTTSTPNAVVDLKPPTVRPLALTHATKLATLYRMLVSFNISTLKQNSNLSEVDEKLMESYIFFCYICRQHFNTVKFYDAHLTEHPAECFTCGKKFHRWKNFSLHLKRHLGWKEFGCSVCDKKFVVRSALVEHMRMHTGLTPLKCKICGKNFKRYSNLTQHRKRHGRQILRKKEFVCHCGEVLPSKARFLWHKETHDAKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQVFAKSSIRAHMATHSMDTQHDCPICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00258261;
90% Identity: iTF_01486635;
80% Identity: -