Mpla021619.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- Zfy1
- Assembly
- GCA_963662105.1
- Location
- OY759210.1:88515406-88520734[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.41 39 5.8 0.3 3 23 19 42 18 42 0.94 2 20 0.00065 0.062 14.6 0.4 1 23 48 70 48 70 0.98 3 20 0.014 1.3 10.4 1.1 2 23 81 104 81 104 0.96 4 20 0.00061 0.058 14.7 0.9 1 23 110 133 110 133 0.98 5 20 6.4e-06 0.00062 20.9 2.2 1 23 162 184 162 184 0.98 6 20 1e-05 0.00097 20.3 5.3 1 23 190 213 190 213 0.96 7 20 0.0052 0.5 11.7 5.7 1 21 219 239 219 242 0.95 8 20 0.025 2.4 9.6 5.0 1 23 253 276 253 276 0.96 9 20 7.1e-06 0.00068 20.8 0.9 1 23 381 403 381 403 0.98 10 20 2.3e-05 0.0022 19.1 2.2 1 23 409 431 409 431 0.98 11 20 0.0035 0.34 12.3 0.4 1 23 444 466 444 466 0.97 12 20 0.0019 0.19 13.1 0.8 1 20 474 493 474 495 0.93 13 20 3.4 3.3e+02 2.9 0.6 7 23 536 552 536 552 0.91 14 20 0.00017 0.016 16.4 5.6 1 23 560 582 560 582 0.98 15 20 0.00015 0.014 16.6 0.4 1 23 589 612 589 612 0.95 16 20 4.3 4.2e+02 2.5 8.7 1 23 618 640 618 640 0.94 17 20 1.1e-05 0.001 20.2 3.2 3 23 722 742 721 742 0.99 18 20 2.8e-05 0.0027 18.9 0.8 1 23 748 770 748 770 0.98 19 20 0.00021 0.02 16.1 0.3 1 23 777 799 777 799 0.97 20 20 5.6e-05 0.0054 17.9 3.3 1 23 805 828 805 828 0.96
Sequence Information
- Coding Sequence
- ATGTCGGAAACTGCCAATTTACTTGAAGAATCAAGCGCTTTAACTAATAATCTATGTAAATACTGCACTTCAGTTACAACTTTTGACAGCTCCACAGCACTACGCATTCACGAACGAGATGTGCATATCTACATTAAAGAGTATCAATGCGACGGATGTTCGTTGAGCTTCAACCAATTGCTGAACTATAAACTGCATGTTGCAACTCATGTAAGAAAAGAGCTGGCTACACAGCCTGGGAGATGCCCTTTGATGAAATGTAGACAAAGCTTCCAACGAATGGCTGCGCTACGGACTCATTTGAAGCAACACGCTGTTAGTGAGAACTTCAGGTGCAATCGTTGTTACAAAGAATTCGAATATGTGGTGCTTTTAAAGGATCACATGAACACTGTCCACTATGCTGGTGTTGATGGAAAAGCGGAAGAGATGATGAAAAAGGCGCACCAAAGACCGAAACGTAGTGCTATTTGCAATGGCAAATATGAGTGTAATAAAtgtggcaaaaaatttaataaaccaTGCTTGCTACGACGTCATGTTATTGTTCATTCGAGTGAAAAACCTTATCAgTGCGAATCCTGCACAAAAAGCTTTTCACAGAAGTCATCGTTGCAACGTCATTATCAACACCAACATGTTGGTGAGAAATTACATAAATGTCGAGAATGTAAAACTAGTTTTGCACAGAAAACAAACTTGCTCTCGCACCTAAAATGCACACATCCAGTAGAAGATTCAACAGCAGAAGATAGATTTGTCTGTGATAGCTGTACTTGCACTTTTACTAAACTCAACAGTTTAAATCGCCACAAGTCGAAAAACCATCTTACATCGGAGTCAGCACGCTTAGCACAACTGGAAATCGCATTTCACGATGAAACTCCTGTTGATGATGCAGCCGAACTAGCACGAAATGTACTGTTGGAGTTGAAGAAACTTCAAGCCGATATGGAACCTGAATCCGTGAAAATGCAAACATCTACAAAAGAATACACATCGGTTGCAGATACCGTACAAACATTAACAATTGATGATTCTGCAACAGATATAATGCAAGTAGTTGATAGACTTAATCCGTTGAAGAAATGTAATACTTTTGATGTGCAATGCATAAGACGCAATGATGGCATAGCTTATTATGTGTGTGATTACTGTGCAAAGGAGTTTAGAAAATCGTATGACTTGATAAGACACCGTCGCGGGCATCGAAACGAAAGGCCTTATAATTGTGAACACTGCAGCAAAGCATttgctacaaaaacaaaattggaagCACATAAAAAGGTTCATATATCTTCTGGAGACGAAGGCCGTATAAATAAACAATACAGCTGTAACATATGTGAACAGAAATTCGATTCAATTCGTCAGCTAGATGCGCATAATAGATTACATCTTCAAACGCATAGTTTTCTTTACGTCTGCTCGATTTGTTCACGTACTTTTAGCACATTAGGAATGTTTTCGACACATAAGCACATCACCTCAGATTATGAACTTCAAGCTCTTATGAAACTACTGCCAGAACCTACAACCATACGAGAAGCAGTCGATAAAGACAACTCGAAATGCACTCAACTAACAAAACAATTACATCAACgtgataaaaaatatgaaaatttaccacACTTGCGACGGCATAAAATAAACCATCAGCACTATCAAGagttaaaatataaatgcaACAATTGTGGCTGttGCTACTCTACAAATAGCGCACTAAacttacattttaaaattcatactGCACACAGTAGAAAATTTGCTTGTAAAATTTgtgttgagaaaaaattttcaacaaaatccgGATTAATACGTCATATGCTCATAcataatcatttaaaaaaattcaaatgtatcTATTGTGAAAAAACCTTCAAAACCAAAGAAAACTGCAAGTGTCACATGAAACTACATTTAAAGGCACTGCTTGAACCAGATAACACAATACTTGCAGTAGAACAGCATCCAGTAAAAGTATGTCAGCTTGTTGTACAAGAAACTAAATACCAAACAACAACACCAAAATTCATCGAAATTCAAATGCTCACAAAATATCGTAGGCATAAGCAACACAAAAATATAACCGTTGACGCTATGCCTGCAGTCGGCACATTGCAAACCGCTAATAATGGCGTTGCAAATAGGGAAAAGAACTTATGTTCCGTGTGCCAGTGTAGTTTCAAAAAACCTAGCGATTTACAGCGCCATCTACGAACGCATACTAAAGAGCGACCATTTTCATGCGAATTATGCTCGAAATCTTTTGCCTTACGATCTACATTAAAAGAACATTTATTAACGCATGCTCAAAAGCGTTCTACATACGATTGTCAAGTGTGTGGTAAACGTTATGCATCGAAAAAAGTACTCGTTCTACATTTACGTTTACACACCGGAGAGCGTCCATTTAGTTGTGAACACTGtgaaaaaacttttcgtacttCTGGGCATCGCAAAGCACACATCAAAGCGGCacataaacaaatataa
- Protein Sequence
- MSETANLLEESSALTNNLCKYCTSVTTFDSSTALRIHERDVHIYIKEYQCDGCSLSFNQLLNYKLHVATHVRKELATQPGRCPLMKCRQSFQRMAALRTHLKQHAVSENFRCNRCYKEFEYVVLLKDHMNTVHYAGVDGKAEEMMKKAHQRPKRSAICNGKYECNKCGKKFNKPCLLRRHVIVHSSEKPYQCESCTKSFSQKSSLQRHYQHQHVGEKLHKCRECKTSFAQKTNLLSHLKCTHPVEDSTAEDRFVCDSCTCTFTKLNSLNRHKSKNHLTSESARLAQLEIAFHDETPVDDAAELARNVLLELKKLQADMEPESVKMQTSTKEYTSVADTVQTLTIDDSATDIMQVVDRLNPLKKCNTFDVQCIRRNDGIAYYVCDYCAKEFRKSYDLIRHRRGHRNERPYNCEHCSKAFATKTKLEAHKKVHISSGDEGRINKQYSCNICEQKFDSIRQLDAHNRLHLQTHSFLYVCSICSRTFSTLGMFSTHKHITSDYELQALMKLLPEPTTIREAVDKDNSKCTQLTKQLHQRDKKYENLPHLRRHKINHQHYQELKYKCNNCGCCYSTNSALNLHFKIHTAHSRKFACKICVEKKFSTKSGLIRHMLIHNHLKKFKCIYCEKTFKTKENCKCHMKLHLKALLEPDNTILAVEQHPVKVCQLVVQETKYQTTTPKFIEIQMLTKYRRHKQHKNITVDAMPAVGTLQTANNGVANREKNLCSVCQCSFKKPSDLQRHLRTHTKERPFSCELCSKSFALRSTLKEHLLTHAQKRSTYDCQVCGKRYASKKVLVLHLRLHTGERPFSCEHCEKTFRTSGHRKAHIKAAHKQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01486497;
- 90% Identity
- -
- 80% Identity
- -