Basic Information

Insect: Meiosimyza platycephala
Gene Symbol: -
Assembly: GCA_963662105.1
Location: OY759209.1:18207783-18211630[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0064 8.9 7.2 0.5 12 29 150 167 143 177 0.81

2 14 0.25 3.5e+02 2.1 1.1 18 41 184 204 173 206 0.76

3 14 4.6 6.4e+03 -1.9 0.0 18 26 212 220 210 226 0.82

4 14 0.37 5.2e+02 1.6 0.2 17 26 239 248 228 264 0.73

5 14 0.96 1.3e+03 0.3 2.0 18 41 280 300 270 302 0.78

6 14 1.6 2.2e+03 -0.5 0.6 18 29 308 319 301 330 0.79

7 14 0.091 1.3e+02 3.5 1.9 9 37 328 351 320 358 0.66

8 14 0.0075 10 7.0 0.3 18 38 376 397 367 401 0.89

9 14 2.8 3.9e+03 -1.2 0.9 18 29 404 415 399 426 0.77

10 14 0.026 36 5.3 1.9 3 33 418 453 415 457 0.72

11 14 0.37 5.2e+02 1.6 5.9 18 38 472 493 465 522 0.90

12 14 0.44 6.1e+02 1.4 2.3 8 43 519 549 512 550 0.69

13 14 1.3e-08 1.8e-05 25.5 0.5 7 44 554 586 553 586 0.91

14 14 0.2 2.8e+02 2.4 0.1 18 29 608 619 604 629 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0064	8.9	7.2	0.5	12	29	150	167	143	177	0.81
2	14	0.25	3.5e+02	2.1	1.1	18	41	184	204	173	206	0.76
3	14	4.6	6.4e+03	-1.9	0.0	18	26	212	220	210	226	0.82
4	14	0.37	5.2e+02	1.6	0.2	17	26	239	248	228	264	0.73
5	14	0.96	1.3e+03	0.3	2.0	18	41	280	300	270	302	0.78
6	14	1.6	2.2e+03	-0.5	0.6	18	29	308	319	301	330	0.79
7	14	0.091	1.3e+02	3.5	1.9	9	37	328	351	320	358	0.66
8	14	0.0075	10	7.0	0.3	18	38	376	397	367	401	0.89
9	14	2.8	3.9e+03	-1.2	0.9	18	29	404	415	399	426	0.77
10	14	0.026	36	5.3	1.9	3	33	418	453	415	457	0.72
11	14	0.37	5.2e+02	1.6	5.9	18	38	472	493	465	522	0.90
12	14	0.44	6.1e+02	1.4	2.3	8	43	519	549	512	550	0.69
13	14	1.3e-08	1.8e-05	25.5	0.5	7	44	554	586	553	586	0.91
14	14	0.2	2.8e+02	2.4	0.1	18	29	608	619	604	629	0.81

Sequence Information

Coding Sequence: ATGGATTGTATGGACCATCCAATAACAGTAAAGGAAGACCGTGTTAATGAACTTCAATTAAAAGTGGAACCAAAAGATGGGGAAGCTGAGGAATTCATTCAAGATATAAGTGGCAAAAGCTTAGGGGAATTTTCTGAAGAGCTTGAGCCAAAAGATGGTTCTCAAGAAGTAGATGGAAGTGTAGTGATAGATATGTTTAAACGATTTGACGAAGAAACAAAGGAATTTATTCAAGAAGATAATACCACGGAAGCTGAATATTTTGACGAGTTAGAAAGTGAAATATTCCCTAACACAAGCGATGAAGAATTTATTTCAGAACCAAAAAAATCAGTGCCACGTATGGTTAAAGCAGAGAATAGAAAATCTGAGTGTTTTTCACAGCGTGCAACTGGCATTAAAAACGAGGAATCAATTACAGATCAAAAGCTTGCAAGAATaccattcgaaaaaaaaacttcatatatttgtattgtttgcggtaaaatttttaaaatacaatattcACTTAACTtacatatgaacatacataAGGACATTAAACCCCACGATTGCAAAACATGTGGACGTAATTTTGCACAAAAGCCACATCTAGCGCGCCATATGAGAACACATAATGGTGAACGTCCATATAAATGCTCTTATTGTCCAGCAGCTTTTGCAGATGTATCGTCTCAGCGTGTGCATCACCGCACTCATACAAATGAGCGCCCTTATGTTTGCGATATTTGTGGCAAATCCTTTCCTACAAATTACTTGAGCAAACATAGAAGAGATGTACATAATATGATTGGCAATAGCGTGAAACCACATGAAAGCAATAAACCAAAACCCTACAAATGCGAAATTTGTGAACATTCTTTTGCTCAAAAAGCACACCTTAATCGTCATATGAGGACACATACTGGTGAACGTCCATATAAATGCTCTTATTGCCCAGCAACTTTTCCAGATTCTAGTACCGTGAAGATGCATCATCGCACCCACACGAATGAGCGTCCTTATGTTTGCGGTATTTGTGGCAAATCATTTACtacaaatgttttgaaaaaacatgaaaaaaaagaacataatAAGAGTGATACTGGCAATGATCCACATAGGAACATTAAACCTAAACCTTACGAATGCGAAATTTGTGAACGTGCTTTTACTCAAAAACCACATTTAACGCGCCATATGAGAACACATACTGGGGAACGTCCATATAAATGCACTTATTGTCCAGCAACTTTTCCTGATTCTAGAGCCGTAAAGAATCATCATCGCACCCACACGAATGAGCGTCCTTATGTTTGCGGTATTTGTGGCAAATCATTTACtacaaatgttttgaaaaaacatgaaaaagaaGTGCATAATCTGAGTGATACTGGAAATAAACCACATAGGAACATTAAACCTAAACCTTACGAATGCGAAATTTGTGAACGTGCTTTTACTCAAAAACCACATTTAACGCGCCATATGAGAACACATACTGGAGAACGGCCATATAAATGCACTTATTGTCCAGCAACCTTTCCTGATTCTAGTACCGTAAGGAAGCATCATCGCACCCACACGAATGAGCGTCCGTATacttgcgacatttgtgacaaaTCATTTACTTCAAATGTTTTGAAAAGACATAAAAGAGTAGCACATAATATAACTGACTTCAGCGAAAAACCACATGAGAGTGCGCGATGCGAAATTTGTGAACGTAATTTTACGCAAAAAGCAAATCTTATGCGCCATATGAAGAGAGCACATCCTGCGGATTTCCAAAATCTTTCAAGCAATCAGAAACATGGcatgCACAAGAATTTGCGTCCATATGTTTGCGATGTTTGTGGTAAATCATTTACATATTCAATTACGTTGAAGCTACATAAAATGATTCACACTGGCGAGAAACCATACGTGTAA
Protein Sequence: MDCMDHPITVKEDRVNELQLKVEPKDGEAEEFIQDISGKSLGEFSEELEPKDGSQEVDGSVVIDMFKRFDEETKEFIQEDNTTEAEYFDELESEIFPNTSDEEFISEPKKSVPRMVKAENRKSECFSQRATGIKNEESITDQKLARIPFEKKTSYICIVCGKIFKIQYSLNLHMNIHKDIKPHDCKTCGRNFAQKPHLARHMRTHNGERPYKCSYCPAAFADVSSQRVHHRTHTNERPYVCDICGKSFPTNYLSKHRRDVHNMIGNSVKPHESNKPKPYKCEICEHSFAQKAHLNRHMRTHTGERPYKCSYCPATFPDSSTVKMHHRTHTNERPYVCGICGKSFTTNVLKKHEKKEHNKSDTGNDPHRNIKPKPYECEICERAFTQKPHLTRHMRTHTGERPYKCTYCPATFPDSRAVKNHHRTHTNERPYVCGICGKSFTTNVLKKHEKEVHNLSDTGNKPHRNIKPKPYECEICERAFTQKPHLTRHMRTHTGERPYKCTYCPATFPDSSTVRKHHRTHTNERPYTCDICDKSFTSNVLKRHKRVAHNITDFSEKPHESARCEICERNFTQKANLMRHMKRAHPADFQNLSSNQKHGMHKNLRPYVCDVCGKSFTYSITLKLHKMIHTGEKPYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00972406;
90% Identity: iTF_00972406;
80% Identity: iTF_00972406;