Mpla001299.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- DMRT2
- Assembly
- GCA_963662105.1
- Location
- OY759208.1:20144877-20149947[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-25 4.5e-21 75.3 12.6 1 47 25 71 25 71 0.99 2 2 1.7 1.1e+04 -2.8 0.1 20 34 216 230 213 232 0.59
Sequence Information
- Coding Sequence
- ATGACCACAATCACTGAGTTAACACGCACTGCCTTTTCATTACCGTCATCAAGCAAAGAACGCCGAGTACTCCGCACTCCCAAATGTGCTAGATGTCGTAACCATGGCGTCATATCTTGCGTTAAAGGACATAAAAAGCTTTGTCGTTGGCGTGAATGTTTTTGTCCCAACTGTCAACTAGTGGTTGATCGTCAACGCGTTATGGCTGCTCAAGTTGCCCTTCGACGGCAACAATCAATGGAGTCATTGGACGTAACAATGGCGCGCAATGATAACGACGAAGACAGGCTCTTATTGGGAGCAAACTGTCAAACATCATCCACAGTACGCACCAAAGAAGCGTTAATTGCACAGAAAAAGATCTACAAACAGCGTTTGCGTTCACTGCAACAATCGGCCCTAAGCATTACTGCGGCCATGGAAGaataCAAACATCGTTTCCCTACGATCAACTCCCCATTAATGGAAAGAATTCGTAAACGCCGTGCTTTTGCTGACCCTGAACTAAATGGTACGTTGGATACAACATTCCTTAATGCATTTATGGATACTAAATTTTCTACAACTCCATTTATGACATCATCCAGTTTTGAGCAGTATCAACCTGCcaatttaataaatagtttaagtGGTACCTACTTAAATCATAATCGTAATCATAATTGGATAAGTTCAAAAACtattaattgcttaaaaaaCCGCTATTCCTCAATATCAGCTGCTGATGAATTAAGAGAATTTAATGATTCTTCAGTTGCACAAACTACCACATTAGAAAGgcctaaattaaatttttcaattgaggCAATAATTGGAATTAATTCCTAA
- Protein Sequence
- MTTITELTRTAFSLPSSSKERRVLRTPKCARCRNHGVISCVKGHKKLCRWRECFCPNCQLVVDRQRVMAAQVALRRQQSMESLDVTMARNDNDEDRLLLGANCQTSSTVRTKEALIAQKKIYKQRLRSLQQSALSITAAMEEYKHRFPTINSPLMERIRKRRAFADPELNGTLDTTFLNAFMDTKFSTTPFMTSSSFEQYQPANLINSLSGTYLNHNRNHNWISSKTINCLKNRYSSISAADELREFNDSSVAQTTTLERPKLNFSIEAIIGINS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01486203;
- 90% Identity
- -
- 80% Identity
- -