Mvio010337.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- nfxl1
- Assembly
- GCA_003671415.1
- Location
- PDGT01000030.1:729099-731573[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.01 1.4e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 3.1e-07 0.0043 17.6 15.9 3 19 186 202 185 202 0.95 4 19 1.1e-08 0.00014 22.3 13.4 3 19 239 255 237 255 0.91 5 19 1.4e-10 1.9e-06 28.3 12.8 1 19 290 308 290 308 0.99 6 19 3.6e-07 0.0049 17.5 18.6 3 19 345 361 344 361 0.93 7 19 0.091 1.2e+03 0.2 3.5 1 11 370 380 370 381 0.83 8 19 2 2.7e+04 -5.1 1.8 5 10 384 389 384 389 0.87 9 19 1.8e-05 0.25 12.0 17.9 1 18 395 412 395 413 0.97 10 19 7.8e-08 0.0011 19.6 18.5 1 18 422 439 422 440 0.98 11 19 0.00053 7.2 7.3 7.0 10 19 489 498 487 498 0.94 12 19 0.0061 83 3.9 7.6 3 11 509 517 508 518 0.89 13 19 0.37 5.1e+03 -1.8 3.3 14 18 547 551 547 552 0.85 14 19 1.1 1.6e+04 -3.3 0.3 9 12 569 572 568 572 0.78 15 19 5.1e-06 0.07 13.8 4.3 1 11 588 598 588 599 0.97 16 19 0.78 1.1e+04 -2.8 1.2 13 19 611 617 610 617 0.79 17 19 0.00029 4 8.1 16.7 3 18 629 645 628 646 0.84 18 19 2 2.7e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 1.4e-06 0.019 15.6 10.8 1 16 687 701 687 706 0.91
Sequence Information
- Coding Sequence
- ATGGCGAGAAGGTATCGTGATGCGGCTGCGAAACTGCAACAAAATGTGCAGAAGCATTTGAAAGAAATGAACGACGTCTCTTCTTCAGAAGATGAAGAACCCTACGAGTCCAGTATTCTGAACAGCGTATTCCAGAGTTACTGGAACGGTGGAGGAGATAATTATATGATAAACAGAACTAAGCATCTTCTAGAGGAAGCCATTGGCGGTCGGTCAGTGACGTGTCTTATTTGCATTGGGTCTATCAAAAGGGCAGATGCGATTTGGACATGTGACCATTGCTTCTGCTATTTCCATCTATTTTGCATACAAAAGTGGGCGAATGACAGCATAAGCTTAAGAACGGAAGAAAATGTGGGACCTATAACAGTAGTTTTGCCCAAGAAAATTGAATGGTGCTGTCCAAAATGCCGACAGTCGTATAGCAAAGAAGAAATACCGCGTCGGTATCATTGTTTTTGCGGCAAAACCGAGGACCCTCCATTTCATCCATGGTTGATACCTCACACCTGTGGGGAAGTCTGCGGGAAAAGATTATCAGTTGGTGACAATTGTAAACACAAGTGCCTTCTTCTCTGTCACCCTGGACCATGTCCGCCGTGTCCACAAACAGTCCTTGGTGTTTGTTATTGTCAAAAGGAATCAAAACAAGTTAGATGTAGTGCAGATAAATGGTCTTGTGGTCAGCAGTGCAAAAAACTCTTGCTATGCAAGTCACATAAGTGTGAAAATTTATGCCATGAAGGAGATTGCCCTCCTTGTACTTATACAAGTTTACAGCCTTGTCTCTGTGCAGCTGAAAAAGTTAAAAGACCTTGTGATGATCTAAAATGGCAATGTCCTAAAAGATGTAATAAACCTTTCTCGTGTGGTTACCATAAGTGTGAAAGAATATGTCATGTGGGAGATTGTGGCCCATGCCCTAATTCAGGAACGATGTTATGTCCATGTGGGGCCAATAAGAGATTTATTGAATGCCCAAATGTCATTGAAACTTGTTTTGGAACTTGTAACAAGAAGCATGATAATTGTGAACATACTTGTCCAGAGAAATGTCATAAGGGACCATGTCCTCCTTGTCAGGTTGTGATAGACAAAATATGTCATTGTGGTAATCATACAAAATCATTGCCATGTTGCAAGGAGTTCAGGTGTGAAACTAAATGTAGAGGAACTAGACCATGCGGAAAACATATTTGTGGAAGAAAATGCTGCAATGGAAACTGTCCCCCATGTGAAAAAGTATGTGATAAACCATTGCTATGTGGACGGCATAAATGTACTAATATCTGTCACCATGGCCCTTGTTATCCTTGCCATCGAGACTCAAAAATAACTTGCCGTTGTAAGGAAACTTATGTTACTGTTCCTTGTGGTAGAGAGAAATATATCAAGCCTCCAAAGTGCAGCCTTCCTTGCAAAATTAAATACAAGTGTGGCCATGTTAATGAGAATCGACACAACTGTCATTTTGGAGATTGTCCACCTTGCAAAGCTATATGCTTGAAAGTTTATCCAAAATGTGAGCATACCTGCAAAGCAGTTTGTCATCAGTATGTTGCTGTGGTTTTTAAACAAGTTGAAAAGCCTGCAACACCATGGGAAGTGCAACCACCAAAGACTAAGATAATGACACTTGAATGTCCACCATGTGAGACTCCTGTACCAGTTACTTGTTTTGGTGGACATGAAATTGAAAATCTGCCTTGCCATTCTGCATCTCGGAGGCCCTGTGGAAGGGAATGTGGTCAGCCTCTACCTTGCGGGAATCATAAGTGTGCTCTATTATGCCATCTATTGAGTTCTGATCCTAATTACCCAAATGTGCCTCAATCCTGCAAATCGTGTAGTAGAGAATGTTCTGTGACACGTCCAGAAAAATGTATGCACAAATGTCCAAAGAGAGGGTGTCATCCAGGTCCTTGTCCACCATGTGACATTTTGGAACGACTTCCTTGTCATTGTGGTGTTACTGAAATATACTTACGTTGTTACGAACTCTCTGTAGTTACAGAAGAAATGTTGTCCTGCAACCAGCAGTGTCCAAGAAACTTACCATGTGGCCATCGCTGCAAGAATATTTGTCACTCTGGTCAATGCAATGAAAATCAGGTTTGCGTAAAGAAAACAAAAGTCTATTGTTGTTGTGGAAATATAAAAAAGGAAGCACCATGCAAGGCTGTTCGAAATTCGGAAATTATTGTTGTATGTGATGAAACCTGCGAAGACAAAAAAAAGGCAGCAAATTTGGAGAAAGAGAAAGAAGAGCAGAGGTTAAAACAGTTGGAAGAAGAGAAAAATCGCAGGGAATTAGCTGCATATGAATGGAAGTTGAGTGGTAAGAAAAAGAAGTATAGAGAAAAGAAGGTTGTGGTTAATGTAGACAACAAAAGTCTGTTACAGAAATATTGGGTTCCTATTTCATCTCTGTTAGTTTTAGTTGTAGCTGGATTTTGCTATATACTTTATGTGTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMNDVSSSEDEEPYESSILNSVFQSYWNGGGDNYMINRTKHLLEEAIGGRSVTCLICIGSIKRADAIWTCDHCFCYFHLFCIQKWANDSISLRTEENVGPITVVLPKKIEWCCPKCRQSYSKEEIPRRYHCFCGKTEDPPFHPWLIPHTCGEVCGKRLSVGDNCKHKCLLLCHPGPCPPCPQTVLGVCYCQKESKQVRCSADKWSCGQQCKKLLLCKSHKCENLCHEGDCPPCTYTSLQPCLCAAEKVKRPCDDLKWQCPKRCNKPFSCGYHKCERICHVGDCGPCPNSGTMLCPCGANKRFIECPNVIETCFGTCNKKHDNCEHTCPEKCHKGPCPPCQVVIDKICHCGNHTKSLPCCKEFRCETKCRGTRPCGKHICGRKCCNGNCPPCEKVCDKPLLCGRHKCTNICHHGPCYPCHRDSKITCRCKETYVTVPCGREKYIKPPKCSLPCKIKYKCGHVNENRHNCHFGDCPPCKAICLKVYPKCEHTCKAVCHQYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCETPVPVTCFGGHEIENLPCHSASRRPCGRECGQPLPCGNHKCALLCHLLSSDPNYPNVPQSCKSCSRECSVTRPEKCMHKCPKRGCHPGPCPPCDILERLPCHCGVTEIYLRCYELSVVTEEMLSCNQQCPRNLPCGHRCKNICHSGQCNENQVCVKKTKVYCCCGNIKKEAPCKAVRNSEIIVVCDETCEDKKKAANLEKEKEEQRLKQLEEEKNRRELAAYEWKLSGKKKKYREKKVVVNVDNKSLLQKYWVPISSLLVLVVAGFCYILYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167395;
- 90% Identity
- iTF_00970914;
- 80% Identity
- iTF_00970914;