Murs010953.1
Basic Information
- Insect
- Megathymus ursus
- Gene Symbol
- egg
- Assembly
- GCA_003671415.1
- Location
- PDGT01000002.1:973086-1000089[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 6.7e+03 -2.9 0.0 28 38 1882 1909 1869 1910 0.64 2 2 1.8e-13 8.4e-10 38.5 0.0 4 75 1941 2005 1938 2007 0.89
Sequence Information
- Coding Sequence
- ATGAGTTCTAAAGACGTCGAGGGTATCATCATTTGTTACAACAAAGATACAAACCAATCACAGGATAAAAATTGTGAAGAGCTAGAAAAAGGTGACTTGTTAGAAAAACTAGGCAGTGTGGGACCGTCATGTACTAAACATGTTGACGAAAATAATGCGGAAAATACAGGCAGAGTAGTTATCAGCACAAATGGAAACAAAGGAAATCTCACAGACCAGATTAATTCTGAAATATCAATAGAGAATAAAGAAGCTGCTTCTCTGTGCAGTGTAGAGGAAGAATTTACAAGCGACATGCAGGAAGAGGAAATAAAATTGAGGTGGGATGATGATGAATATTCAGTGGAATTTGGGGAAAAAGTTGTTACCACTGATACAAGCAAAGACACTTGTCTTAATTCTGGAAAGGAAGCGATCAATAAAAATGAACTTTACCTACTAAAGAGGAGTAGCGCTATTGACAGTGGTAAAGAATTTATCCAAAATGCAGTAGTTACTGAGCTTATTTCAACCAAACCTCAAAGTGAGTCATTTGCAGAGGCTCCAGTTTTAAAAAGTGAGCATGGAATAAACCAACCAGATGTTATGTTAGAGATACCTGGTATGGGTATGCTACCAGATATGGACAAGGAGTTAGAAAGTATGGatgttgaaatgttttttgataCTGACAAAGATTTAAGCTCTGAAGATACAGACAAAAGCTTGTCAGAATTAGTTTCGAAAGCAAATGATGAAATAACTGAAACATTGTCTTCTCTGGAAGAAAGTGAAATGGATGGTAAATTGGAAATGTCTCCTGATAAAAGTGATGACACTCCTGCAGCTcctactattaataaaactacattAACAAATGCattcaaaattgaaatgaaattactaTCAGACACAACAATCTCTATTGCAGAAGAGACTGATCCTTCTGtagataaattaagtttaatggAAGCAGATAAAATGGAACTAAAATGTTTAGTTAAATCAATGTCCAACCAAGAGCAAGATGACACCTTTGACAATATACCTACTTCACTTACTAAACCTTCAACTgttatagaagaaaaaaatgtatttgaacttcaAGCTACCACAAGCGAGcagagagaaaaaaatatgaatctcAAAGTGTCCACCCTTATTAGTAGTATAGAAGAAGAAATGCAACTTTTAGACTCTAATGACGACATGGATATCTCTGAAAGAACTTCCGAaattaagaaacttaaaaaacCTGCCAAAATAGAAAGTATCATAGACTTATTTCCATtagatactttaaataaaaatgtggcaGAAGTATCAACTAAAGTAGTGGCAGACACTACATCTGATGAAACAGTACAGTTAGTTGATACCACTGAAAATACTACAATAGATGTTTCTGAAAAAATTTCCTTCATATCTGAAACAGATACTAAAAGTAAAGATTTTGATGAGAGTGAAATAAGGCAGAATGAGCAAGATGAATTAGCTCAAGCTGTTAAAGCTATTGAACAAGAGAATGAAATCTATGAGTCTGCAACTGCGGTTActgttgttaatgttaatgctGCTGATGAATTAACTGAAATATCTGTGATAGATGAAGATGATCAGCCATCAATATCATTGGTgttagatgatgatgatgatgaaagtaTTGAAGTCCTTCATCAAAATGTCAGTCCCATGTCAGTAATGATTGATGAGTCTGAAGTTTCTGTCATCCAAGATAGTGAGGATGATGATTTGCCAATATTGGTTTCAGATACTGTTGATATACCAAtacaacatataatacaaaaatcaccAGAGTCAACTGAAATACGACAAGTGAAAAATAAACAGTCAGAAGTGATAAaaggtgaaataaataaattaattgattcagAATGTAAAGAATTTGCATTGTCTGAAATTAACaaagaagaaaaatgtttaacaataaaagtaaaaaatatagaatctGAACAAAAATCACTTGTGTGTGAGAATATAGAACCTAAAATTACATCAGATCAAAAAATCGACGACAAGAAACATGATGTGTCGTTGGATGAATCTTCGAAAACACTGATAGAGAATGAGATGGCTAAAATAGAAACCTCATTGGACAACAGcagtatacaaacaaataaagataAAGTGAACGATAAAACCTTTGATGAAGTACAAAAAGCAGAAATAGATATTGCTCCAATAGATTCAACTATGTCAAGTAAAGATGAAATAAAACGCTTAGAGAATGTTAATGTTAACCTCTTTTCACCTTCTCAAGATATTGCCCATGATACAAATCATCTAACTTCAttgcttttaaaacaacataaagaTGTTTCAGCAGGTGAACAGAATGCTAATTTACCGGATGAGGTTCCACAAGATATTATACCACAACCGTCAACGTCAACTgataatttgtatgtaaataaagattCATCGAATGACGTTCCAGACTCGGATACGCTTGGCCTCTTAGCGGAGTCCACGAGAGTGATGGATGACGACGAGGATCAGgacgaagaagaagaagatgacgatttttataatgatgatgAAAGCAATTTAATGACAGCAGAGCATTCAGAAGATTCAAACCAGCCATCAGATGATGCTCAGGAAACTCAAGATGTGGTGGAAACTGATGAGAAAGAAATCGCTAAACTTACACAATTAGAAATTACTGATGTCAGTGTGGTTGGTGACCAGGATTATGTGGAGCAAGAATTGGAGTCACCGGAGCATCAAGAGGACAGCTTCCAGTTCACAATTAGTAATGTGACAAATGATGTGCAGAAGGATAATGATGCTTCTGAGATTATGGAGAGTgatATCCAATTAGAAGACAAGTCAGTAGGACCTGTTGAACAGAATATGGACGCTATAAAACACCCTGCGCCTGAAGATGTCGAGAAATCTGTCATAGAACCAGTCCAGACATCAGATATGTCAGAGTTAGTGGGTAAAACAGACAATGAACCTGCTCCTGTGCCAGCTGAGAAAGAGACTAAATCGCCGAACAAAATCATGAGTCTTACCATATCATCAAAGCAAAATGTCTGGAATTTTGTAGACCTCGAGGAGAGCTCGGAAGATGaaattcaaATAGTGCAGAAGCCCATTGAGACGGTCGCCACAACTAATCAAGCAGAGGCGCGTCCAGACCCAGCACAACTGACAACCCAGAAGCAACCAGACGAAGAAACACAACAGACACGGCCAgagAGGACGGCCGCGCCGATGGCGCAGGCCGCGGCGGGGTCAGCCGGCCAGTCCAATGTGGCGACCCTGGATGAGGCTGTGTTACGAGTGGACGACTCAGTTCCAGTAAGTGGCTTGGAAGTGTTTAATCTTGATTCGGATGAAGAAGACACCGTTGAACGTACGGCGCCGGTTGAAgAGCCATTGAGCCAAACAGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGAGCTGGAACCGGAGCCTGAGCCTGCCAAGCGCGACTTTAAGTGCGTAAACAGCAATTGCAAGTATGCCGCCGGTGTTCGGTATTTGGTGGCAGATTCTGCAACGCTGGCCTACTACGAGGGAGAAAAGCGGCGCCGTACGTTCGTATGCGAGGATTGCTGGCGGACAGTACAAGCGCGCAATGAGGAGCTGATGGAAGGCATCCGCAACTTGACGCCCCTGTTGGAGCTGGACATGACCACGTTCAGCCCGGACCTGGTGGAGATATCCGACTCGGACTCCGAGGGGGAGCCCGAAATCGAGGAACACGAGAAGGAGAAGATCGGCGACGTCACCGCCAAATTGTTAGAAGAAAACTTAGCGGATATGATTAATGAGACATGGGTGAAGTACCAAATGGATTCCCGGCTCACCGACACGGAGTCTGTGCTGCAAATGGAGTTGCGGAGACTGGAGGCTGAGAGCAAGGAGATTCACTCGTTCCTGAACGAGTGCCAGGCGACTACGGACAGGATCCGCAACGAGCTGTACGCCACCTTCCCGCAGGAGATCCAGCAGGTGCCGCCGCTGATGGTGTACGACACGCCGGACAAACAGGCGACTACGGACAGGATCCGCAACGAGCTGTACGCCACCTTCCCGCAGGAGATCCAGCAGGTGCCGCCGCTGATGGTGTACGACACGCCGGAAAAACAGAACAAGGAGATTCAGTTGTTCTTGAACGAGTGCCAGGCGACTACGGACAGGATCCGCAACGAGCTGTACGCCACCTTCCCGCAGGAGATCCAGCAGGTGCCGCCGCTGATGGTGTACGACACGCCGGACAAACAGGATCCGCAACGAGCTGTACTCCACCTTCCCGCAGGAGATCCAGCATGTGCCGCCGCTGATGGTGTACGACACGCCGGACAAACAGGTGAGCTCCCTCTCCAGAACAAGGAGATTCAGTTGTTCTTGAACGAGTGCCAGGCGACTCCAGAGAAGATCCGCAATGAGCTGTATGCCAGCGAACCTGCAGGAGATCCTGCAGGTCCCGCGATGTCACCGAAGGACGGAGAGAGCCCGCCTCCGGTTCCGACGCGGATGTCCAAGCGGAGGCTGGAGGCTGCAGCGAACGCGGAGAACCTGGCGCCGGCGAAGCGCCCCGCCATCCCGTTGGGGTACACCCCTTTGGAGGCGCTCGAACAGATGGATAACAAGATGGCCGGGAAGGGCACCGGCGCTGCGGAGAAGGTCGACGATGATAACACAGACGTGTCAGTGGTGAACATAATATCGTCGGAGGCGGCGCCCCCGGGACTCCCGCCGCCCGGCGAGCTGGCAAAGCCGCCGCTCAGGATCGGCATGACGGTGTACGCGATGAAGAACTCCTTCGGCTCCTGGGTCAAGGGCAAGATTCTAGAGATCGTACCAAAGGGAACGTCGCCGACGGCGTTCACGACGTGCAAGGTGAAGTTTGAACATAAGCAGTCCAAGACGCCGGTGAAGACCGTCCTCGCCAGGTCCATGGCGTACTCTGAGCCCGCCGCCGTCAGACTGACCATCGGTACTCGCGTCATTGCTAATTTCAAAGACACGAAAGACAACAAGGAGCCGCCCCAGACGGACTCCAAGCGGGAGTCGTACTTCTCCGGCATAGTCGCGGAAGTGCCCAACCCAGTCAACAACTACAGatatcTGATATTTTTCGACGATGGCTACGCGCAGTACGTGAGCCATGCGGACACTCGGTTGGTGTGCGAGTGCGCATCGCTGGTGTGGGAGGAGGTACATCCCTTCAGTCGGGAGTTCGTTAGGGAGTACCTCCTGGCGTACCCTGAGAGACCTATGGTCAGGCTGCATCCTTTCCAAAGTTTGAAGACGGAATGGAATGGCAAGTGGTGGACGTCGCGCGTGGTGGCGGTGGACGCGTCGCTGGCGCAGGTGCACTTCACCGCCAACAACCGCTACGAGTGGATCTACCGCGGGTCGACGCGCCTCGCGCCGCTCTACCTGGAGCTGCAGGCGGCCGAGCGGCACCGCTCGCGGCCCATGCCGAGGGCGCAGGCGCACGCGAGGGCCAACATGCCCGTGGTGGAGTACACGCGCTACGACGAACAGTCCAACAAGACGTTCGATGTAGACAGCACGCCGCAGCAACAAAAACAGGAAGCGGAGGCGAACCGTCAGCGGGCGGTGGCCAAAAAGTCCACGGGCGGCTCGGTGGGCCAGCCCGCGCCGGCCGCCCGCCTGTCGCCCGGACACAACCTGGACAACGTCACCAGCAGGGTGGTGTATTACACGCCGAAGAATGCGGTGAAACCGCACAAGATGGTTCCGCACACGTGCGGGCCCAAGTGCAAGCGCACCGACGTGCTCGCTCTCAAGGACCTGCGCACCTACAACCCGCTGGCCAAGCCGTTGCTCAGCGGCTGGGAGAGACAAATCGTTCGCTACAAGGGTCAGAAGGCGGTGTCGTACCGCGCACCGTGCGGGCGGCGCGTGCGTAACGCGCACGAGCTGCACCGCTACCTGAGGGCGACGCGCGCCGACCTGCCCGTCGACCTGTTCGATTTCTCGCCCGCCACGCACTGTCTCGCCGAGTTCGTGCTCAACAAGTGCCTCATCATGAAGAAGGATCTGTCCCAGGGCAAGGAGAACGTGCCGGTCCCGTGCGTGAACTACTACGACGAGACGCTGCCGGAGTTCTGTCTGTACAACACGGAGCGCACGCCCACCGCCGGGGTCCCACTCAACCTCGACCCTGAGTTCCTGTGCGGCTGCGACTGCGAGGACGATTGCGAGGACAAATCAAAGTGTGCGTGTTGGAAGTTGACGCTGGAGGGTGCTCGCACCATCGGCCTGGAGGGCGACAACGTGGGCTACGTCTACAAGCGGCTGCCCGAGCCGCTGCCCTCGGGGATATACGAGTGCAACTCCAGGTGCAAATGCAAGCACACTTGCTTGAACCGAGTCGCGCAGCACCCTTTGCAGCTGAAGTTACAGATATTCAAAACCCTAAACCGCGGGTGGGGCATCCGCGCGTTGAACGATGTGCCCAAGGGCTCCTTCTTGTGCGTGTACGCGGGCAACCTTTTAACGGATGCGACCGCTAACATGGACGGTCTGAACGAGGGTGACGAGTACCTCGCCGAGCTGGACTACATCGAGGTGGTGGAGCAGATGAAGGAGGGCTACGAAGACGACATACCCAAGGACGTCAGGAAGGAGCTACAGGACAAAGAGGAAGAAGACGCGGAGCAGGAGGAGTCCTCGGAGGATGAGAGCCAGCGGACGTCCAAGGACGAGCTGGAGGACGACGACTTCGAGCCCGCGCCACACGTGGGCGTCCGCGTCACGCAGTTCAGtaaacGTCTTCGCCAAAGAAACCGGAATAAAGAGGAGAATGCTACCGATGACAAAAAGGAGAGTGAGAAGGAAAAAGTTGAGCCGAAGAAGGAATGCGAGAGGGGGTCGAACGACGAAGATTGCATCACCATAAGCGATGACGACGAAGTGAGGGAGCCGTCCAGCTTCGCCGCCGCCGCGGGGATGGGCGCGAACGCGTTCGTCTCCAAATATAGGTCGGTGCGCAGTTTGTTCGGCGAGGACGAGTCGTGCTACATCATGGACGCTAAGGTTCAGGGCAACATTGGCAGATATTTGAATCACTCGTGCTCGCCGAACGTGTTCGTGCAGAACGTGTTCGTGGACACGCACGACCCGCGCTTCCCGTGGGTGGCGTTCTTCGCGCTGAGCCACGTGCGCGCCGGCACCGAGCTCACCTGGAACTACAACTACGACGTGGGCTCCGTGCCCAACAAGACGCTCTACTGCTACTGCGGCTCCGCCAACTGCAGGGGCCGGCTGCTCTGA
- Protein Sequence
- MSSKDVEGIIICYNKDTNQSQDKNCEELEKGDLLEKLGSVGPSCTKHVDENNAENTGRVVISTNGNKGNLTDQINSEISIENKEAASLCSVEEEFTSDMQEEEIKLRWDDDEYSVEFGEKVVTTDTSKDTCLNSGKEAINKNELYLLKRSSAIDSGKEFIQNAVVTELISTKPQSESFAEAPVLKSEHGINQPDVMLEIPGMGMLPDMDKELESMDVEMFFDTDKDLSSEDTDKSLSELVSKANDEITETLSSLEESEMDGKLEMSPDKSDDTPAAPTINKTTLTNAFKIEMKLLSDTTISIAEETDPSVDKLSLMEADKMELKCLVKSMSNQEQDDTFDNIPTSLTKPSTVIEEKNVFELQATTSEQREKNMNLKVSTLISSIEEEMQLLDSNDDMDISERTSEIKKLKKPAKIESIIDLFPLDTLNKNVAEVSTKVVADTTSDETVQLVDTTENTTIDVSEKISFISETDTKSKDFDESEIRQNEQDELAQAVKAIEQENEIYESATAVTVVNVNAADELTEISVIDEDDQPSISLVLDDDDDESIEVLHQNVSPMSVMIDESEVSVIQDSEDDDLPILVSDTVDIPIQHIIQKSPESTEIRQVKNKQSEVIKGEINKLIDSECKEFALSEINKEEKCLTIKVKNIESEQKSLVCENIEPKITSDQKIDDKKHDVSLDESSKTLIENEMAKIETSLDNSSIQTNKDKVNDKTFDEVQKAEIDIAPIDSTMSSKDEIKRLENVNVNLFSPSQDIAHDTNHLTSLLLKQHKDVSAGEQNANLPDEVPQDIIPQPSTSTDNLYVNKDSSNDVPDSDTLGLLAESTRVMDDDEDQDEEEEDDDFYNDDESNLMTAEHSEDSNQPSDDAQETQDVVETDEKEIAKLTQLEITDVSVVGDQDYVEQELESPEHQEDSFQFTISNVTNDVQKDNDASEIMESDIQLEDKSVGPVEQNMDAIKHPAPEDVEKSVIEPVQTSDMSELVGKTDNEPAPVPAEKETKSPNKIMSLTISSKQNVWNFVDLEESSEDEIQIVQKPIETVATTNQAEARPDPAQLTTQKQPDEETQQTRPERTAAPMAQAAAGSAGQSNVATLDEAVLRVDDSVPVSGLEVFNLDSDEEDTVERTAPVEEPLSQTEPEPEPEPEPEPEPELEPEPEPAKRDFKCVNSNCKYAAGVRYLVADSATLAYYEGEKRRRTFVCEDCWRTVQARNEELMEGIRNLTPLLELDMTTFSPDLVEISDSDSEGEPEIEEHEKEKIGDVTAKLLEENLADMINETWVKYQMDSRLTDTESVLQMELRRLEAESKEIHSFLNECQATTDRIRNELYATFPQEIQQVPPLMVYDTPDKQATTDRIRNELYATFPQEIQQVPPLMVYDTPEKQNKEIQLFLNECQATTDRIRNELYATFPQEIQQVPPLMVYDTPDKQDPQRAVLHLPAGDPACAAADGVRHAGQTGELPLQNKEIQLFLNECQATPEKIRNELYASEPAGDPAGPAMSPKDGESPPPVPTRMSKRRLEAAANAENLAPAKRPAIPLGYTPLEALEQMDNKMAGKGTGAAEKVDDDNTDVSVVNIISSEAAPPGLPPPGELAKPPLRIGMTVYAMKNSFGSWVKGKILEIVPKGTSPTAFTTCKVKFEHKQSKTPVKTVLARSMAYSEPAAVRLTIGTRVIANFKDTKDNKEPPQTDSKRESYFSGIVAEVPNPVNNYRYLIFFDDGYAQYVSHADTRLVCECASLVWEEVHPFSREFVREYLLAYPERPMVRLHPFQSLKTEWNGKWWTSRVVAVDASLAQVHFTANNRYEWIYRGSTRLAPLYLELQAAERHRSRPMPRAQAHARANMPVVEYTRYDEQSNKTFDVDSTPQQQKQEAEANRQRAVAKKSTGGSVGQPAPAARLSPGHNLDNVTSRVVYYTPKNAVKPHKMVPHTCGPKCKRTDVLALKDLRTYNPLAKPLLSGWERQIVRYKGQKAVSYRAPCGRRVRNAHELHRYLRATRADLPVDLFDFSPATHCLAEFVLNKCLIMKKDLSQGKENVPVPCVNYYDETLPEFCLYNTERTPTAGVPLNLDPEFLCGCDCEDDCEDKSKCACWKLTLEGARTIGLEGDNVGYVYKRLPEPLPSGIYECNSRCKCKHTCLNRVAQHPLQLKLQIFKTLNRGWGIRALNDVPKGSFLCVYAGNLLTDATANMDGLNEGDEYLAELDYIEVVEQMKEGYEDDIPKDVRKELQDKEEEDAEQEESSEDESQRTSKDELEDDDFEPAPHVGVRVTQFSKRLRQRNRNKEENATDDKKESEKEKVEPKKECERGSNDEDCITISDDDEVREPSSFAAAAGMGANAFVSKYRSVRSLFGEDESCYIMDAKVQGNIGRYLNHSCSPNVFVQNVFVDTHDPRFPWVAFFALSHVRAGTELTWNYNYDVGSVPNKTLYCYCGSANCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -