Basic Information

Insect: Megastigmus stigmatizans
Gene Symbol: -
Assembly: GCA_900490015.1
Location: UELV01137961.1:18763-22401[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0007 0.093 14.1 0.9 1 23 219 241 219 241 0.96

2 11 0.021 2.8 9.5 0.1 1 23 249 272 249 272 0.92

3 11 4.5e-07 6e-05 24.2 1.1 1 23 309 331 309 331 0.98

4 11 5.2e-05 0.0069 17.7 0.4 2 23 437 458 436 458 0.98

5 11 4.5e-06 0.0006 21.0 1.8 1 23 463 486 463 486 0.95

6 11 8.8e-05 0.012 17.0 0.4 1 23 517 539 517 539 0.97

7 11 1.8e-07 2.4e-05 25.4 1.2 1 23 549 571 549 571 0.96

8 11 3.3e-05 0.0044 18.3 0.8 1 23 577 599 577 599 0.99

9 11 1.3e-05 0.0017 19.6 0.2 1 23 605 627 605 627 0.98

10 11 4.3e-06 0.00057 21.1 2.0 1 23 633 655 633 655 0.98

11 11 0.0005 0.067 14.6 0.3 1 21 661 681 661 682 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0007	0.093	14.1	0.9	1	23	219	241	219	241	0.96
2	11	0.021	2.8	9.5	0.1	1	23	249	272	249	272	0.92
3	11	4.5e-07	6e-05	24.2	1.1	1	23	309	331	309	331	0.98
4	11	5.2e-05	0.0069	17.7	0.4	2	23	437	458	436	458	0.98
5	11	4.5e-06	0.0006	21.0	1.8	1	23	463	486	463	486	0.95
6	11	8.8e-05	0.012	17.0	0.4	1	23	517	539	517	539	0.97
7	11	1.8e-07	2.4e-05	25.4	1.2	1	23	549	571	549	571	0.96
8	11	3.3e-05	0.0044	18.3	0.8	1	23	577	599	577	599	0.99
9	11	1.3e-05	0.0017	19.6	0.2	1	23	605	627	605	627	0.98
10	11	4.3e-06	0.00057	21.1	2.0	1	23	633	655	633	655	0.98
11	11	0.0005	0.067	14.6	0.3	1	21	661	681	661	682	0.94

Sequence Information

Coding Sequence: ATGGAGGATGTAAAGATGTACGATGTCGGCGCTACTGCCGACGGCGCCGATGTCCTGGCGAATAGGAGTAATAGCGGTGCCGAGACCTGTAGATTGTGCTTGAAGAGATTAGAGGTCGGGGAGAATCTCGTGTATAGGGATCTGTTCAGGACCGATATGCCACAGAAACTGATGGCATTTACTTCTGTCCAGATGAATGAAAATGACGGGCTGCCAAGTACCATTTGTACAAATTGCCGGGATCTGGTTTATATGACTTACAATTTCAAATGTCAAGTAGAAAAAAGTGATCATGATCTTCGTCAAGCTTTATTAATAAGACACTCAATAGCATATTGGCCTACAGATTCCACCACAAAATCTGTTGAACCTTCATCTTCCGTGGATGCTGTAGCATTTGCTAACCAAAAGAAAATTAGCTCTATCATTGAAGATGAAAGTGTGTTCAAAAATAGTAATAGTGTGCCTTTAGGCATAGGCAATAGAGTATCAGAAAGTGGAAACAGTGGGGATGATATTTCTATAAGTTTTGAAACACAGTATGAAAACAAGTATGAAGTAggcaaaaattctttaaaatcagAACTATCAAGTATTCATGAAAATTCCAATCTAAGTGATGATGAAAAGCCTTtaattttaagaacaaaaagacataaatgtaattattgtataaaatcattTGCTAATCTAACTTTGCTGGAGAAGCATGCTATCATTCATAAAAAGCAGCCTGACTTTATATATGTCTGTTATTTATGTGATGAACAATTTTCTTCAGTTGATAAAGTTAAAACCCATGCAATGGCAATCCATGCTGTAGATATAGATAGGAATAAATTAATGGAAAATAGTAAAATGCGAAGAATAACTGGATGGGTCCAAAAGACTAGAGATGATAGTATTATGGAggaaattcataaatttgtATGTAAAGTTTGTGGTAGACAATTTACAAACAATAAACTATACTTGGCTCACATGAGAACTCATTCACGTTCCAATAAGTTATTGAAAGACTCAAACAAAGGTTCAAATATTGCAGAGTCAACAACTTGTATAGTAAGTAAGAATGATCATCCAGAAAATGCAAAAGTTTCTACTGAATCACAGAGTGTAGAAGGTAGTGCTCCCCAAGCTAACATACAAACTAGAGCTTATTCAAAGAATATAGAAGCTTCTCTTCCAGTGAATGTAACTAGAACTGAAACTAACAGAACCTGTTCTTATAGAGATACTACAGATGAGTCTGAAGATGATGATGAAGACGATAATGATCAAAATGGTAATACACCTCCAGGAAATGTACAATGTAATCAATGTGGTAAACTTGTTGCAACCTTAAGAAATCTTAAAAGGCATTTATTAACTCACTCTGGTCTTAAACACAACTGTTCAATATGTGGTAAAGACTTTTCAAGACCAGATAAACTTAAAGAGCATCAACAATTAAAACACAAGGAAGAATTACTGGGAAAATCTGACTCGGAAAATGAATCTGTAAATAGTAAAATAGTTAGACGAAAAAAGaataaaAAGAAACGATCCCACAAGTGTTCTTTATGTCCCAAGGCGTTTGCACAGGCTCAGTCATTAGCAAATCACGAAGAAAGGCATAGGCGCGTTCAAGATGTGAATAAGCGGTACTTGTGCGAGATCTGCAGTAAATGTTTCGCTCAGAGTGGATCATTGAATGCACATATGCGTACGCACACAGGTGTTAAACCCTATGTCTGTCAGATTTGTAGTAGAGCTTTCACTAAAGGCACATATTTACAACTGCATCTCAGAACGCATAGCGGAGAAAAACCATACATTTGTCAGTATTGCAGCAGAGCCTTTGCTCGGGCTAATACTTTGGCCCGGCACATTACAATGCACACAGGGGAAGCTAAGTATCAATGCCAAATCTGTGAAAAATCATTTAGACGACTAACGTCTCTAAATGagcatacatatacacatacggGTCAAAGACCTTATGCCTGCAAGATTTGTTCTAAGAGATATAACAATGCTGGTTCATTGTATGCTCATactaaaaaatgcaaaattatgcAGACTACTCCAGATACTCCAGAAACTATAGATACAACAGACACTCCAGATACGACAATGACATATCCTGTTTCTATGGAACCGACTGACAGTATTATAGTATCAGACAGTGACATTAATCTTGTGCCGCAGCTTTTGATTTTCACAGACAAAAAACTTGAAGATACAATAACAGACGAAATGTTAATGGGTGAACATTCAACGTGTCAATTTATGATAGCTAATATACCAGGGCAGAAGCCAATGTCAACTAATATGTTAGATCAATTTATAATTCAAGAACCTGATGTTTACAATCTCAACTCAAAGCAATTTAAGACATCCTACTATGGATTGTATCCAAGTATGTAG
Protein Sequence: MEDVKMYDVGATADGADVLANRSNSGAETCRLCLKRLEVGENLVYRDLFRTDMPQKLMAFTSVQMNENDGLPSTICTNCRDLVYMTYNFKCQVEKSDHDLRQALLIRHSIAYWPTDSTTKSVEPSSSVDAVAFANQKKISSIIEDESVFKNSNSVPLGIGNRVSESGNSGDDISISFETQYENKYEVGKNSLKSELSSIHENSNLSDDEKPLILRTKRHKCNYCIKSFANLTLLEKHAIIHKKQPDFIYVCYLCDEQFSSVDKVKTHAMAIHAVDIDRNKLMENSKMRRITGWVQKTRDDSIMEEIHKFVCKVCGRQFTNNKLYLAHMRTHSRSNKLLKDSNKGSNIAESTTCIVSKNDHPENAKVSTESQSVEGSAPQANIQTRAYSKNIEASLPVNVTRTETNRTCSYRDTTDESEDDDEDDNDQNGNTPPGNVQCNQCGKLVATLRNLKRHLLTHSGLKHNCSICGKDFSRPDKLKEHQQLKHKEELLGKSDSENESVNSKIVRRKKNKKKRSHKCSLCPKAFAQAQSLANHEERHRRVQDVNKRYLCEICSKCFAQSGSLNAHMRTHTGVKPYVCQICSRAFTKGTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYQCQICEKSFRRLTSLNEHTYTHTGQRPYACKICSKRYNNAGSLYAHTKKCKIMQTTPDTPETIDTTDTPDTTMTYPVSMEPTDSIIVSDSDINLVPQLLIFTDKKLEDTITDEMLMGEHSTCQFMIANIPGQKPMSTNMLDQFIIQEPDVYNLNSKQFKTSYYGLYPSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00969017;
90% Identity: iTF_00969017;
80% Identity: -