Basic Information

Insect: Megastigmus dorsalis
Gene Symbol: -
Assembly: GCA_900490025.1
Location: UELU01139193.1:66829-70479[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00068 0.085 14.1 0.9 1 23 219 241 219 241 0.96

2 11 0.042 5.2 8.5 0.2 1 22 249 270 249 272 0.89

3 11 2.8e-07 3.5e-05 24.8 1.2 1 23 309 331 309 331 0.98

4 11 5.2e-05 0.0064 17.7 0.5 2 23 437 458 436 458 0.98

5 11 4.4e-06 0.00055 21.0 1.8 1 23 463 486 463 486 0.95

6 11 0.00012 0.015 16.5 0.4 1 23 517 539 517 539 0.97

7 11 1.8e-07 2.2e-05 25.4 1.2 1 23 549 571 549 571 0.96

8 11 3.3e-05 0.004 18.3 0.8 1 23 577 599 577 599 0.99

9 11 1.3e-05 0.0016 19.6 0.2 1 23 605 627 605 627 0.98

10 11 4.2e-06 0.00052 21.1 2.0 1 23 633 655 633 655 0.98

11 11 0.00049 0.06 14.6 0.3 1 21 661 681 661 682 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00068	0.085	14.1	0.9	1	23	219	241	219	241	0.96
2	11	0.042	5.2	8.5	0.2	1	22	249	270	249	272	0.89
3	11	2.8e-07	3.5e-05	24.8	1.2	1	23	309	331	309	331	0.98
4	11	5.2e-05	0.0064	17.7	0.5	2	23	437	458	436	458	0.98
5	11	4.4e-06	0.00055	21.0	1.8	1	23	463	486	463	486	0.95
6	11	0.00012	0.015	16.5	0.4	1	23	517	539	517	539	0.97
7	11	1.8e-07	2.2e-05	25.4	1.2	1	23	549	571	549	571	0.96
8	11	3.3e-05	0.004	18.3	0.8	1	23	577	599	577	599	0.99
9	11	1.3e-05	0.0016	19.6	0.2	1	23	605	627	605	627	0.98
10	11	4.2e-06	0.00052	21.1	2.0	1	23	633	655	633	655	0.98
11	11	0.00049	0.06	14.6	0.3	1	21	661	681	661	682	0.94

Sequence Information

Coding Sequence: ATGGAGGATGTGAAGATGTACGATGTCGGCGCTACTGCCGACGGCGCCGATATCCTGGCGAATAGGAGTAATAGCGGTGCCGAGACCTGTAGATTGTGCTTGAAGAGATTAGAGGTCGGGGAGAATCTCGTGTATAGGGATTTGTTCAGGACCGATATGCCACAGAAACTGATGGCATTTACTTCTGTCCAGATGAATGAAAATGATGGGTTGCCAAGTACCATTTGTACAAATTGCCGGGATCTGGTTTATATGACTTACAATTTCAAATGTCAAGTAGAAAAAAGTGATCATGATCTTCGTCAAGCTTTATTAATAAGACAGTCAACAGTACACTGGCCTACTGATTTCACCACAAAATCTGTTCAACTTTCATCTTCCGTGGAAACTGTAGCATCTGCTAGCCAAAAGAAAATTAGCTCTGTCATTGAAGATAAAAGTGTGTTTGAAAATAGTAATAGTGTGCCTTTAGGCATAGGCAATAGAGTATCAGAAAGTGCAAACAGTGGGGATGATATTTCTATAAGTTTTGAAACACAGTATGAAAACAAGTATGAAGTAggcaaaaattctttaaaatcagAACTATCAAGTATTCATCAAAATTCCAATCAAAGTGATGATGAAAAGCCTTtaattttaagaacaaaaagacataaatgtaattattgtataaaGTCATTTGCTAATCTAACTTTGCTGGAGAAGCATGCTATCATTCATAAAAAGCAGCCTGACTTTATATATGTCTGTTATTTATGTGATGAACAATTTTCTTCAGTTGATAAAGTTAAAACCCATGCAACGGCAATCCATGCTGTAGATATAGATAGGAATAAATTAATGGAAAATAGTAAAATGCGAAGAATAACTGGATGGGTCCAAAAGGCTAAAGATGATAGTATTATGAAGGAAATTCATAAATTTGTATGTAAAGTTTGTGGTAGACAATTCACAAACAATAAACTATACATGGCTCACATGAGAACTCATTCACGTTACAATAAGTTATTGAAAGACTCAAACAAAGGTTCAGATATTGCAGAGTCAACAACTTGTATAGCAATTAAGAATGATCATCCAGAAAATGCAAAAGTTTCTTCTGAATCACAGAGTGTTGAAGGTAGTGTTCCTCAAGCTAACATACAAACTAGAGCATATTCAAAGAATATAGAAGCTTCTCTTCCAGTGAATGTAACTAGAACAGAAACTAACAGAACCTGTTCTCATAGAGATACTACAGATGAGTCTGAAGATGATGATGAAGACGATAATGATCAAAATGGTAATACACCTCCAGGAAATGTAAAATGTAATCAATGTGGTAAACTTGTTGCAACCTTAAGAAATCTTAAAAGGCATTTATTAACTCACTCTGGTCTTAAACACAACTGTTCAATATGTGGTAAAGACTTTTCAAGACCAGATAAACTTAAAGAGCATCAACAATTAAAACACAAGGAAAAATTACTGGGAAAATCTGACTCGGAAAATGAATCTGTAGATAGTAAAATAGTTAGCCGAAAAAAGaataAAAAGAAACGAACCCACAAGTGTTCTTTATGTCCCAAGGCATTCGCACAGGCTCAGACATTAGCAAATCACGAAGAAAGGCATAGGCGTGTTCAAGATGTGAATAAGCGATACTTGTGCGAGATCTGCAGTAAATGTTTCGCTCAGAGTGGATCATTGAATGCACATATGCGTACACACACAGGTGTTAAACCCTATGTCTGTCAAATTTGTAGTAGAGCTTTCACTAAAGGCACATATTTACAACTGCATCTCAGAACGCATAGCGGAGAGAAACCATACATTTGTCAGTATTGCAGCAGAGCCTTTGCTCGGGCTAATACTTTGGCTCGACACATTACAATGCACACAGGGGAAGCTAAGTATCAATGCCAAATCTGTGAAAAATCGTTTAGGCGACTAACGTCTCTAAATGagcatacatatacacatacggGTCAAAGACCTTATGCCTGCAAGATTTGTTCTAAGAGATATAACAATGCTGGTTCATTGTATGCTCATactaaaaaatgcaaaattatgcAGATTACTCCAGATACTCCAGAAACTCTAGATACAACAGACACTCCAGATACGACAATGACATATCCTGTTTCTATGGAACCGACTGACAGTATTATGGTATCAGACAGTGACATTAATCTTGTACCGCAGCTTTTGATTTTCACAGACAAAAAACTTGAAGATACAATAACAGACGAGATGTTAATGGGTGAACATTCAACGTGTCAATTTATGATAGCTAATATACCAGGGCAGAAGCCAATGTCAACTAATGTGTTAGATCAATTTATAATTCAAGAACCTGATGTTTATAGTCTCAATTCAAAGCAATTTAAGACATCCTACTATGGATTGTATCCAAGTATGTAG
Protein Sequence: MEDVKMYDVGATADGADILANRSNSGAETCRLCLKRLEVGENLVYRDLFRTDMPQKLMAFTSVQMNENDGLPSTICTNCRDLVYMTYNFKCQVEKSDHDLRQALLIRQSTVHWPTDFTTKSVQLSSSVETVASASQKKISSVIEDKSVFENSNSVPLGIGNRVSESANSGDDISISFETQYENKYEVGKNSLKSELSSIHQNSNQSDDEKPLILRTKRHKCNYCIKSFANLTLLEKHAIIHKKQPDFIYVCYLCDEQFSSVDKVKTHATAIHAVDIDRNKLMENSKMRRITGWVQKAKDDSIMKEIHKFVCKVCGRQFTNNKLYMAHMRTHSRYNKLLKDSNKGSDIAESTTCIAIKNDHPENAKVSSESQSVEGSVPQANIQTRAYSKNIEASLPVNVTRTETNRTCSHRDTTDESEDDDEDDNDQNGNTPPGNVKCNQCGKLVATLRNLKRHLLTHSGLKHNCSICGKDFSRPDKLKEHQQLKHKEKLLGKSDSENESVDSKIVSRKKNKKKRTHKCSLCPKAFAQAQTLANHEERHRRVQDVNKRYLCEICSKCFAQSGSLNAHMRTHTGVKPYVCQICSRAFTKGTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYQCQICEKSFRRLTSLNEHTYTHTGQRPYACKICSKRYNNAGSLYAHTKKCKIMQITPDTPETLDTTDTPDTTMTYPVSMEPTDSIMVSDSDINLVPQLLIFTDKKLEDTITDEMLMGEHSTCQFMIANIPGQKPMSTNVLDQFIIQEPDVYSLNSKQFKTSYYGLYPSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00969831;
90% Identity: iTF_00969831;
80% Identity: -