Msti012526.1
Basic Information
- Insect
- Megastigmus stigmatizans
- Gene Symbol
- lov
- Assembly
- GCA_900490015.1
- Location
- UELV01135145.1:13256-15661[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-07 0.00018 22.1 0.1 2 38 213 248 212 254 0.90 2 4 3.9e-11 2.1e-08 34.7 0.0 3 38 264 298 262 301 0.93 3 4 0.0039 2.1 9.0 0.0 7 34 320 346 317 352 0.84 4 4 6e-11 3.2e-08 34.0 0.0 2 39 375 412 374 416 0.92
Sequence Information
- Coding Sequence
- ATGTCCGAGTCAGCGGTgaatgctgctgctgcggtgttGGCATCGGCGTCGGGTAACGAGCAATCGCAGACCGACACCTCCTACTGCTTCAAATGGAGCAATTATCAGAATCATCTGTCCGAGGTCGTGAGACAGCTACTCGAGGAGGAATGTATGGTCGACGTTACCCTCTATGCCGGTGGCGAGCGCATACAGGCTCATCGCCTGGTTTTGTGCGCCTGCAGCACTTTGTTTCAAGAAATTCTTAGCCAGAATAATGATGAACATCCTGTTATAATTTTGAGTGATATCTCGCCTCAAGATGTTAGATCTATTGTGGAATTCAGCTACAATGGAGAAGTTAGAATTCCTGTTGATAACATCAACAATTTGTTGGAAGCAGCGCATTCTTTGAAGATCTGTGGTTTGATGGAAattGGCGGTCTAGATGAAACTGAAATCTCAGCTGATAAAGAATTCAGTGCTGAAGAATCATACATACTTAATGAAGTAATACAAACAGAAGATGACGACGACGAGATCtatgaaaaagtaaataataaaaagattaaagaaaaaatacaaaaaaattcatcTGAGGATTCAGATTCTAAATcaagaaaacaaagaaaaagtgTTGGTAAAAAGGAATACAGTGATGAAATGTTATCTGCTGCTATTGCTGACATACGTGCCGGATGTTCGTTACTGGAAGCAGCTTCAAAAAATCATATTCCAAGGTCAACTCTTTATATGCGTGCAAAAGTTTTAGGAATAGCACTAAATCCATCTAGAAGTGAATATACCATTGAAGATATGAAGGGAGCCATACAAACAGTTATGggTGGGTCCAGTTTGCAGCAAGCTGCAGACTGTTATGGAATACCCAAAACTGTTTTATGGAGGAGGATTCAAAAAGAAGGCTGTTTACCACCTAGacaagataaaagaaaaaattatgctATAGAAAAAAGAGAAGCTGCCATAAGAGCTTTAGCAAGAGGAGAAGCTCTTACGAAAGTTGCCAACAAATACAAGATTCCAAAAACTACATTATTTCGTGACAAAGCTCGTTTGGTAGACCAAGGAAAGCTACCTTTATCTTTTTGGAAAAAGCGAAAAACAGACAGTGAAGATCTTAAGCGAAATCGCTTAGAAGAAGCGGTGATAGCATGCAAAGATGGTAAAATGTCCCAAGCAGCAGCATCTGTATTATATCAAATACCTAAAACTACTATATGGAGGCGTCTTCAAAAAGACATTAAAAAACCAGAATCACCATCTCCTAAAAAGATAATAAAGAAAGTTGAAACTGAAGAAGGCAGGCATGCAGAAATTATTAAGGCAGAACAGATACAGGAGGCTGATTTTGAAACATATTGTCCAGATGATGCAGAAATGAATATAACATATATTGATGAAAACAACATATCAGAAGACCCAGTGATAATTTTTGCAAGTGATGATGTAGATGAATTAAATTTACCAAACAGCAGATCATTGGTAGTTGTTCAGGAAacTGGTGAAGAAAGCTTTATATCATGTGGATTAGAATTAGATGACAACTCAACTTTTGTTTCAAAAAGttaa
- Protein Sequence
- MSESAVNAAAAVLASASGNEQSQTDTSYCFKWSNYQNHLSEVVRQLLEEECMVDVTLYAGGERIQAHRLVLCACSTLFQEILSQNNDEHPVIILSDISPQDVRSIVEFSYNGEVRIPVDNINNLLEAAHSLKICGLMEIGGLDETEISADKEFSAEESYILNEVIQTEDDDDEIYEKVNNKKIKEKIQKNSSEDSDSKSRKQRKSVGKKEYSDEMLSAAIADIRAGCSLLEAASKNHIPRSTLYMRAKVLGIALNPSRSEYTIEDMKGAIQTVMGGSSLQQAADCYGIPKTVLWRRIQKEGCLPPRQDKRKNYAIEKREAAIRALARGEALTKVANKYKIPKTTLFRDKARLVDQGKLPLSFWKKRKTDSEDLKRNRLEEAVIACKDGKMSQAAASVLYQIPKTTIWRRLQKDIKKPESPSPKKIIKKVETEEGRHAEIIKAEQIQEADFETYCPDDAEMNITYIDENNISEDPVIIFASDDVDELNLPNSRSLVVVQETGEESFISCGLELDDNSTFVSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00968712;
- 90% Identity
- iTF_00968712;
- 80% Identity
- iTF_00969747;