Mdor008981.1
Basic Information
- Insect
- Megastigmus dorsalis
- Gene Symbol
- lov
- Assembly
- GCA_900490025.1
- Location
- UELU01134684.1:20442-22840[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.3e-08 6.3e-05 23.4 0.1 2 38 213 248 212 254 0.90 2 4 2.2e-11 1.9e-08 34.7 0.0 3 38 264 298 262 301 0.93 3 4 0.0026 2.3 8.8 0.0 7 34 320 346 318 352 0.82 4 4 3.4e-11 2.9e-08 34.0 0.0 2 39 375 412 374 416 0.92
Sequence Information
- Coding Sequence
- ATGTCCGAGTCAACGGtgaatgctgctgctgcggtgttGGCATCGGCGTCGGGTAACGAACAGTCGCAGACCGACACCTCCTACTGCTTCAAATGGAGCAATTATCAGAATCATCTGTCCGAGGTCGTGAGACAGCTACTCGAGGAGGAATGTATGGTCGACGTTACCCTCTATGCCGGTGGCGAGCGCATACAGGCTCATCGCCTGGTTTTGTGCGCCTGCAGCACTTTGTTTCAAGAAATTCTTAGCCAGAATAATGATGAACATCCTGTTATAATTTTGAGTGATATATCGCCTCAAGATGTTAGATCTATTGTGGAATTCAGCTACAATGGAGAAGTTAGAATTCCTGTTGATAACATTAACAATTTGTTGGAAGCAGCGCATTCTTTGAAGATCTGTGGTTTGATGGAAattGGAGGTCTAGATGAAACTGAAATCTCAGCTGATAAAGACTTCAGTGCTGAAGAATCATACATACTCAATGAAGTAATGCAAACAGAAGATGACGACGATGAGACctatgaaaaagtaaataataaaaagataaaagaaaaagtacaaaaaaattcatCTGAAGATTCAGATTCTAAATCaagaaaacgaagaaaaagTGTGGGTAAAAAGGAATACAGTGATGAAATGTTAGCTGCTGCTATTGCTGACATACGTGCCGGATGTTCGTTACTGGAAGCAGCTTCAAAAAATCATATTCCAAGGTCTACTCTTTATATGCGTGCAAAAGTTTTAGGAATAGCACTAAACCCATCTAGAAGTGAATATACCATTGAAGATATGAAGGGGGCCATACAAACAGTTATGGgTGGGTCCAGTTTGCAACAGGCTGCAGACTGTTATGGAATACCCAAAACTGTTTTATGGAGGAGGATTCAAAAAGAAGGCTGTTTACCACCTAGacaagataaaagaaaaaattatgctATAGAAAAAAGAGAAGCTGCCGTAAGAGCTTTAGCAAGAGGAGAAGCTCTTACGAAAGTTGCCAACAAATACAAGATTCCAAAAACTACATTATTTCGTGACAAAGCTCGTTTGGTAGACCAAGGAAAGCTACCTTTATCTTTTTGGAAAAAGCGAAAAACAGACAGTGAAGAACTTAAGCGAAATCGCTTAGAAGAAGCGGTGATTGCGTGCAAAGATGGTAAAATGTCGCAAGCAGCAGCATCGGTATTATATCAAATACCTAAAACTACTATATGGAGGCGTCTTcaaaaagacattaaaaaaaCAGAATCGCCATCTCCTAGAAAGATAATAAAGAAAGTTGAAACTGAAGAAGGCAGGCATGCAGAAATTATTAAGGCAGAAGAGATACAGGAGGCTGATTTTGAAGCATATTGTCCAGATGATGCAGAAATGAATATAACATATATTGACGAAAACAACATATCAGAAGACCCAGTGATAATTTTTGCAAGTGGTGATGTAGATGAATTAAATTTGCCAAACAGCAGATCATTGGTAGTCGTTCAGGAAgcTGGTGAAGAAAGCTTTATATCATGTGGATTAGAATTAGATGACAACTCAACTTTTGTTTCAAAAAGTTaa
- Protein Sequence
- MSESTVNAAAAVLASASGNEQSQTDTSYCFKWSNYQNHLSEVVRQLLEEECMVDVTLYAGGERIQAHRLVLCACSTLFQEILSQNNDEHPVIILSDISPQDVRSIVEFSYNGEVRIPVDNINNLLEAAHSLKICGLMEIGGLDETEISADKDFSAEESYILNEVMQTEDDDDETYEKVNNKKIKEKVQKNSSEDSDSKSRKRRKSVGKKEYSDEMLAAAIADIRAGCSLLEAASKNHIPRSTLYMRAKVLGIALNPSRSEYTIEDMKGAIQTVMGGSSLQQAADCYGIPKTVLWRRIQKEGCLPPRQDKRKNYAIEKREAAVRALARGEALTKVANKYKIPKTTLFRDKARLVDQGKLPLSFWKKRKTDSEELKRNRLEEAVIACKDGKMSQAAASVLYQIPKTTIWRRLQKDIKKTESPSPRKIIKKVETEEGRHAEIIKAEEIQEADFEAYCPDDAEMNITYIDENNISEDPVIIFASGDVDELNLPNSRSLVVVQEAGEESFISCGLELDDNSTFVSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969487; iTF_00968947; iTF_00969747;
- 90% Identity
- iTF_00969487; iTF_00968947; iTF_00969747;
- 80% Identity
- iTF_00968947;