Basic Information

Insect: Megastigmus stigmatizans
Gene Symbol: -
Assembly: GCA_900490015.1
Location: UELV01098904.1:1-5496[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 4.1e-12 2.2e-09 37.8 0.0 1 39 330 369 330 373 0.90

2 4 3.3e-11 1.8e-08 34.9 0.0 2 39 385 422 384 425 0.94

3 4 4.6e-18 2.4e-15 56.8 0.0 2 45 440 484 439 484 0.97

4 4 5.2e-18 2.8e-15 56.6 0.1 1 42 491 533 491 534 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	4.1e-12	2.2e-09	37.8	0.0	1	39	330	369	330	373	0.90
2	4	3.3e-11	1.8e-08	34.9	0.0	2	39	385	422	384	425	0.94
3	4	4.6e-18	2.4e-15	56.8	0.0	2	45	440	484	439	484	0.97
4	4	5.2e-18	2.8e-15	56.6	0.1	1	42	491	533	491	534	0.97

Sequence Information

Coding Sequence: TCGCTGCTGAAGACGGCTGACCAGCTGAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAGCAGGGAGGGCCCCTCGGTGAGCCTGAGCTCGCCGCCCCGCGACTCCAGCACGCCCCGGCTCAACTACACCAAGCTCAAGAAGCACCACCACGCCCGCTACAAGAGGCCGCGCACCACTTACgagaacaacaacaacaacaacaacaccagCAGCAGATCAGCATCGGCAAACACGGAGCAAACGAGGCAACACCACctccaccatcaccaccaccacctcgcCGCCGATCCCAAGTACAAGGAGGAGGACTTTGTCGACAGCTACGTGCGCGACTGCAACAAGGAGAACCGCCGAGACTGTTGGCCGGCTGAAGATGACGATTGCATGGAGACGACAGGGACGACGACAACAGTAGTCCTGGACTCGTGccagcgcagcagcagcgccggaggaggtggcggcggcggcggaggcggaggcggcggcggaggaggaggtggtggagtcgacaacaacaacagcagcggcaACAACAACGCTGCCGGCGCAGCAGCGACCAACAACAACGGTGACATGTTCTGTCACACAGGTCTAGGTCACTACGGCCATCATCCAGATCCAGGCGAGGTGGACTTGCCGCCCGAGACGCAGCCAACACCGCCGAGCGCGACCCTCGTCGGTACCACCATCACCCACCTCAGGGATTCCGACCACCACGCCGCAGACATCCAGAGCTGCGACAGCGTAAAGATAAAGTTCGAGACGTTGCACACAATGGATTCGTCGGACACGATCGACATCGACAGTCACATGTCCGACCGGGCGAGCGTCAGTTCGAAAAACGCCGACGACAACATGATGATGATCACGCCCGAGCTCCTGGGCCTCATGCCCTCCGGCAGCTCCGTGCACTCCGACTCGGGCGAGAACAACTCGCGCAGCCACTCGGGACAGTCGGTCTCCCACCATCACGGCTCCAAGTCCTGGACGCAGGAGGACATGGACGCGGCGCTCGAGGCGCTCAGGAACCACGACATGAGCCTCACCAAAGCCTCTGCGACCTTTGGCATACCCTCGACTACGCTCTGGCAGCGGGCGCACCGACTGGGCATCGACACGCCCAAGAAGGACGGGCCGACCAAGTCCTGGAGCGACGAGAGCCTCAACAACGCCCTGGACGCCCTGCGCACCGGGACCATCTCGGCCAACAAGGCCTCCAAGGCCTTCGGCATACCCTCCAGCACGCTCTACAAGATCGCGAGGCGGGAGGGCATCAGGCTCGCGGCGCCCTTCAACGCGAGCCCGACCACCTGGTCGCCGGCGGACCTCGACCGGGCGCTCGAGGCCATCAGGTCGGGCCAGACCTCCGTGCAGAGGGCCTCGACCGAGTTCGGCATACCGACCGGGACGCTCTACGGCCGCTGCAAGCGGGAGGGCATAGAGCTCAGCAGGAGCAACCCGACGCCCTGGAGCGAGGACGCCATGACCGAGGCTCTGGAGGCTGTCAGACTGGGCCACATGAGCATAAACCAAGCGGCGATCCACTACAATCTGCCGTACTCGTCGCTGTACGGGCGCTTCAAGCGTGGCAAGTACGAGGAGCCGGTCGTGAACGAGATGTCGCAGGACGGCTCGTCGCAGCACTTCCATCAAAGCCCGAGCCAGAATCACTCCTCCTCCCTTCCCGACCAAATGCCCTACCAGGGCAGCTGA
Protein Sequence: SLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRLNYTKLKKHHHARYKRPRTTYENNNNNNNTSSRSASANTEQTRQHHLHHHHHHLAADPKYKEEDFVDSYVRDCNKENRRDCWPAEDDDCMETTGTTTTVVLDSCQRSSSAGGGGGGGGGGGGGGGGGGGVDNNNSSGNNNAAGAAATNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDSDHHAADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSVSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFHQSPSQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00304983;
90% Identity: iTF_00463914;
80% Identity: -