Mdor011057.1
Basic Information
- Insect
- Megastigmus dorsalis
- Gene Symbol
- -
- Assembly
- GCA_900490025.1
- Location
- UELU01143520.1:16283-26594[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-12 2.2e-09 37.7 0.0 1 39 368 407 368 411 0.90 2 4 2e-11 1.7e-08 34.8 0.0 2 39 423 460 422 463 0.94 3 4 2.8e-18 2.4e-15 56.7 0.0 2 45 478 522 477 522 0.97 4 4 3.2e-18 2.8e-15 56.5 0.1 1 42 529 571 529 572 0.97
Sequence Information
- Coding Sequence
- ATGCAGCTTTGTCGAGGACGCCCGGGATGTTGGGGACGCCTAGAGGTCCATGACGGACCTTCCGAAAATAGAAGGTCCCGCGAGCTAGAAAAAACAATCGGCGAAAGGAAAGCGGGGGAGGAGATGAGACTGCGGGAGAGCGACGGCGGCGGTCGAGAGGATAGGAAGGGAGTCTGCTCGCTGCTGAAGACGGCTGACCAGCTGAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAGCAGGGAGGGCCCCTCGGTGAGCCTGAGCTCGCCGCCCCGCGACTCCAGCACGCCCCGGCTCAACTACACCAAGCTCAAGAAGCACCACCACGCCCGCTACAAGAGGCCGCGCACCGCTTACgagaacaacaacaacaacaacaacaacaacaccagCAGCAGATCAGCATCGGCAAACACGGAGCAAACGAGGCAACACCacctccaccaccaccaccaccatcacctCGCCGCCGATCCCAAGTACAAGGAGGAGGACTTTGTCGACAGCTACGTGCGCGACTGCAACAAGGAGAACCGCCGAGACTGTTGGCCGGCTGAAGATGACGATTGCATGGAGACGACAGGGACGACGACAACAGTAGTCCTGGACTCGTGccagcgcagcagcagcgccggaggaggtggcggcggcggcggaggcggaggcggaggaggaggaggagGTGACATGTTCTGTCACACAGGTCTAGGTCACTACGGCCATCATCCGGATCCAGGCGAGGTGGACTTGCCGCCCGAGACGCAGCCAACGCCGCCGAGCGCGACCCTCGTCGGCACCACCATCACCCACCTCAGGGATTCCGACCACCACGCCGCAGACATCCAGAGCTGCGACAGCGTAAAGATAAAGTTCGAGACGCTGCACACAATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACCGGGCGAGCGTCAGTTCGAAAAACGCCGACGACAACATGATGATGATCACGCCCGAGCTCCTGGGCCTCATGCCCTCCGGCAGCTCCGTCCACTCCGACTCGGGCGAGAACAACTCGCGCAGCCACTCGGGACAGTCGGTCTCCCACCATCACGGCTCAAAGTCCTGGACGCAGGAGGACATGGACGCGGCGCTCGAGGCGCTCAGGAACCACGACATGAGCCTGACCAAAGCCTCTGCGACCTTCGGCATACCCTCGACCACGCTCTGGCAGCGGGCGCACCGACTGGGCATCGACACGCCCAAGAAGGACGGGCCGACCAAGTCCTGGAGCGACGAGAGCCTGAACAACGCCCTGGACGCCCTGCGCACCGGCACCATCTCGGCCAACAAGGCCTCCAAGGCCTTCGGCATACCCTCCAGCACGCTCTACAAGATCGCGAGGCGGGAGGGCATCAGGCTGGCGGCGCCCTTCAACGCGAGCCCGACCACCTGGTCGCCGGCGGACCTCGACCGGGCGCTCGAGGCCATCAGGTCGGGCCAGACCTCCGTGCAGAGGGCCTCGACCGAGTTCGGCATACCGACCGGGACGCTCTACGGCCGCTGCAAGCGGGAGGGCATAGAGCTCAGCAGGAGCAACCCGACGCCCTGGAGCGAGGACGCCATGACCGAGGCTCTCGAGGCTGTCAGACTGGGCCACATGAGCATAAATCAAGCGGCGATCCATTACAATCTGCCGTACTCGTCGCTGTACGGGCGCTTCAAGCGTGGCAAGTACGAGGAGCCGGTCGTGAACGAGATGTCGCAGGACGGCTCGTCGCAGCACTTCCATCAAAGCCCGAGCCAGAATCACTCCTCCTCCCTTCCCGACCAAATGCCCTACCAGGGCAGCTGA
- Protein Sequence
- MQLCRGRPGCWGRLEVHDGPSENRRSRELEKTIGERKAGEEMRLRESDGGGREDRKGVCSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRLNYTKLKKHHHARYKRPRTAYENNNNNNNNNTSSRSASANTEQTRQHHLHHHHHHHLAADPKYKEEDFVDSYVRDCNKENRRDCWPAEDDDCMETTGTTTTVVLDSCQRSSSAGGGGGGGGGGGGGGGGGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDSDHHAADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSVSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFHQSPSQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_00463914;
- 80% Identity
- -