Basic Information

Insect: Meganola albula
Gene Symbol: -
Assembly: GCA_936440415.1
Location: CAKZFH010000029.1:637685-649601[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0016 0.12 12.9 2.6 3 23 240 260 238 260 0.97

2 11 0.0004 0.031 14.8 6.6 1 23 266 288 266 288 0.95

3 11 0.0015 0.12 13.0 6.9 1 23 294 316 294 316 0.98

4 11 0.00031 0.024 15.2 1.5 1 23 322 344 322 344 0.97

5 11 6.4e-06 0.00049 20.5 0.9 1 23 350 372 350 372 0.97

6 11 1.4e-06 0.00011 22.6 0.1 1 23 378 400 378 400 0.98

7 11 5.2e-05 0.004 17.6 2.5 1 23 405 427 405 427 0.97

8 11 1.4 1.1e+02 3.7 0.3 5 22 437 454 434 457 0.85

9 11 1.5e-05 0.0011 19.3 0.8 1 23 542 564 542 564 0.98

10 11 9.2e-05 0.0071 16.8 1.4 1 23 628 650 628 650 0.96

11 11 2.6e-05 0.002 18.6 4.3 1 23 660 682 660 682 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0016	0.12	12.9	2.6	3	23	240	260	238	260	0.97
2	11	0.0004	0.031	14.8	6.6	1	23	266	288	266	288	0.95
3	11	0.0015	0.12	13.0	6.9	1	23	294	316	294	316	0.98
4	11	0.00031	0.024	15.2	1.5	1	23	322	344	322	344	0.97
5	11	6.4e-06	0.00049	20.5	0.9	1	23	350	372	350	372	0.97
6	11	1.4e-06	0.00011	22.6	0.1	1	23	378	400	378	400	0.98
7	11	5.2e-05	0.004	17.6	2.5	1	23	405	427	405	427	0.97
8	11	1.4	1.1e+02	3.7	0.3	5	22	437	454	434	457	0.85
9	11	1.5e-05	0.0011	19.3	0.8	1	23	542	564	542	564	0.98
10	11	9.2e-05	0.0071	16.8	1.4	1	23	628	650	628	650	0.96
11	11	2.6e-05	0.002	18.6	4.3	1	23	660	682	660	682	0.97

Sequence Information

Coding Sequence: ATGTGTATGCCGACTCCTAATAATGTCTCGGGCTTCGGATACTCGTGGGGCTTTACAAGTTCCGCTGATCTTACGAAGGGTGAGGTGGATACACCAAGTAGCTTGAGCTACACTTTAGGCAATACGGTGTCTCCAGAAACTACTCTAACTGTGATGTCTCACAAAACACCACAAGTGCAAGAAAAAGTGGGAGCAGTCACAGTAGTGTCAAATTCTGGAGCTCAGCTAACAAGAGTGGTTACAACAGGGAACCCTATTACAGGCCGGAGAGCAATGTTTTTGGTGAATGATGCACCTGCACACACAATAAATAGGGTCACACAACAGAATCAAACTGCTACCATACATACAGCAAACCTAGCATCGAAGCCATTTATGACTCCAATAGGACCAATCCAACTCACAGCAGAAGAATGTAATGAAATCCTTATGAAGAGAGCGCTACAAGCTCAAGGCATAGCTACACCAGTCATAGACGCATCCCAACTTAACCACACATTGTTAAACGGTGGTTTAAAGGCATTAACAGAAACTGCAAACCAGCAATCACAAGCAGAAACTATACAGACTTCAACTGTGCATCAGCATCATTTGTTAAATGCTAAACAGGAACCTGGGACCACCAATAATTCACCAAAAGCGGTGTATTCACAGGCAGAGCTGATCAACTCTAGCATGACGACGCAGCCGGCGCCGGTAAAAGAGCGTCCTTACGGCTGTGACGAGTGCGGGAAGTCGTTTCTCTTGAAGCATCATCTTACTACACACGCTAGAGTGCATACTGGTGAGAGGCCTCACATTTGCGCCCACTGCGGCAAAGCGTTCGCCCGCAAGCATTGTCTGAACACACATTTGCTGCTACACTCAGCTGAAAGGCCGTACAGGTGTCACGAATGTAAAATGGCTTTTACATTGAAACATCATTTAGTTACGCATTCCAGGGTGCACAGTCGCGACCGTCCGTTCGTATGCAACGAGTGTGGCCGCGGGTTCCCGCTCAAGCGGCATCTCGTCACACACAGCAAGTACCACGCTGGAGAGAGACCATACGTCTGTTCAGATTGTGGCGAGAGCTTTGCGCAGAAGGAGCACCTGGTGATGCACAGCCGGTTCCACGGTTCGCTGTCGCCGTACGTGTGTCCGGACTGCGGCGTGACGTTCGCGCGCAAGTTCCAGCTCGTGAACCACGGCCGCGTGCACGGCAAGGTGCCGCACTCCTGTCCCATCTGTGGGAAGGAGTTCCTGCAGAAGCGGACGCTGCATGCGCATATGAAAATACACATAGGCGTCGGTGCCTTGGCCTGTATAGAATGCGGAGAAGCATTCAAATGCAAAGAAGAATTGGACCAACACTACAAAATCGCGCGGCATTGCGTAGGCTCACCGTCACAACATCAAACGCCACAACAACAACAACAGCAAGCTCAACAACAACAAGAAGCGCAGCACCAGGCGCAGCAACAACAACAACAGGCTCAGCAGCAGGCGCAACAACAGCAACAACAACAACAGCAGCAGCAGCAACAACAACAGCAAACTGTTATTAAACAAGATGACTTTAAACCACAAATTGTTCATGTGATAGGTGCAGATGGTCAAATAATAACGGAAAAAACACCGCAGTACTCGTGTCCTGAATGTGGATCCTGTTTTAACACTAAGGAGGCGCTGTCGCTGCACGTGCGGCTGCACGCGGGCGACCGCACGTGCGTCAACGATCTGTGCATACTGACCGCTGCCTTACAGCCAGGACTTGTCGCCGCACATCAAGCTACACATAGTCAACCTATTCAAATAATCTCATCGAGTCCCAACAACAATGTAGTTCACACGCAAGTAATAGCTACGAATCACCATGTAGCAGCTCCTCGACCGAAGATACACTTCTGTGCCGACTGCGGGAAAGGATTCGCGGCAAAGCACGGACTTTTAGCTCATCAGAGGCGACATCCGGACGGCAGTTGCACGCTTCGCACGCATGTCTGTGACCAGTGCGGCAAAGCCTTCTTCCAGAAAAACCATTTAATGCTACATCAAAGGCAACATATGGACTTGTCCAATAGGAATAACTCAATCCAAGTAACAACACAGCAAGTTACACAACAAGAGGCTGCACAACGCGCGGCACACGCGCAGCAGGTCCAACAACAAGTGCAACAACAGGTCCAACAGCAAGTCCAACAACAGGTCCAACAGCAGGTCCAACAACAGGTTCAACAGCAGGTCCAACAACAAGTCCAACAGGTCCAACAACAAGTACAGCAAGTGCAACAACAACAACACCAAAACAGTATAGAGCTAGAACAACAAGATCATCAACAGCAAGCAACACACATACAAGTGGTGACGAACAGATCAGGTCAGGTGATCGGCAATCAGATAGTGACGCGACGACTGGTGGCGCCTCAGCTGCACATTGTTCGTGACAAGCCACTGCATCTACTGCACAAGCAGGCGAGACATCATACTGCCAGTGGTGAAGCCAAAGAAGTCGGTAGCTTAGTGCTCTCAACAGGTCGGACTGGTCTCATTAAATATGAGATCTCCTTACCACAACCCAATTCTGTGGTACAAGTGCAACAACTCGACTGA
Protein Sequence: MCMPTPNNVSGFGYSWGFTSSADLTKGEVDTPSSLSYTLGNTVSPETTLTVMSHKTPQVQEKVGAVTVVSNSGAQLTRVVTTGNPITGRRAMFLVNDAPAHTINRVTQQNQTATIHTANLASKPFMTPIGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHTLLNGGLKALTETANQQSQAETIQTSTVHQHHLLNAKQEPGTTNNSPKAVYSQAELINSSMTTQPAPVKERPYGCDECGKSFLLKHHLTTHARVHTGERPHICAHCGKAFARKHCLNTHLLLHSAERPYRCHECKMAFTLKHHLVTHSRVHSRDRPFVCNECGRGFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKEHLVMHSRFHGSLSPYVCPDCGVTFARKFQLVNHGRVHGKVPHSCPICGKEFLQKRTLHAHMKIHIGVGALACIECGEAFKCKEELDQHYKIARHCVGSPSQHQTPQQQQQQAQQQQEAQHQAQQQQQQAQQQAQQQQQQQQQQQQQQQQTVIKQDDFKPQIVHVIGADGQIITEKTPQYSCPECGSCFNTKEALSLHVRLHAGDRTCVNDLCILTAALQPGLVAAHQATHSQPIQIISSSPNNNVVHTQVIATNHHVAAPRPKIHFCADCGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLSNRNNSIQVTTQQVTQQEAAQRAAHAQQVQQQVQQQVQQQVQQQVQQQVQQQVQQQVQQQVQQVQQQVQQVQQQQHQNSIELEQQDHQQQATHIQVVTNRSGQVIGNQIVTRRLVAPQLHIVRDKPLHLLHKQARHHTASGEAKEVGSLVLSTGRTGLIKYEISLPQPNSVVQVQQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00018396;
90% Identity: -
80% Identity: -