Malb017801.1
Basic Information
- Insect
- Meganola albula
- Gene Symbol
- -
- Assembly
- GCA_936440415.1
- Location
- CAKZFH010000406.1:7275-25841[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-15 1.4e-11 43.9 0.0 7 70 99 160 95 165 0.88 2 2 0.31 1e+03 -0.5 0.0 11 42 382 431 373 438 0.71
Sequence Information
- Coding Sequence
- ATGGGTTTTGATGAAATAAAGGAAGAGATCAAAGCTGCAGATTACTGTAAGATTTTAGAACGGTTGGAAGCTGAGGTGACAGCAGCTAGCAAGAATCTTGTGCGACTTAAAACTGTGATGGGTATACCAGCAGTGCCTGCAAGAGAGTCGAAGCGATATAGAAAAGACACAGATGGATCAAGACCCTCTTCAGCATTATCTTCACGATCTGAAGGCGACGGAGCTACCGATGTCAGCACAGCGTCATCGCCTGCGCATCGCCGTCGCGCCACAACAGAAATGTCGTCACCACTACTGAGAATACCCCTAGAGCGCGGGTGGAAGAGAGAGCTGGTGTACCGAGCAGCACTGGACGCTCACTCGAGAAGGAACGCCGATATTTACTATTATACGCCGCTGGGGAAGAAACTGCGGTCCACTAGAGAGGTGGCTGAACAGTTAGGTGGCACAGGGCTCACTCTGGAGAATTTCTCTTTCTTCAAAGAACCGCTCGGTGTTGATGATCCTGAAAAGGAGATTATAAGAGACGCGAAACTGATGTCTCGTCGGGTGGATTCCCCTGTCGCAGCGACGGCGCCACCTGTCACAGTGGAAGGCAAACGCACTCCCAAACCGAAGCAACCTAAAGGTGCAAGTCCTGAACCTGTGACTCCTGCCTCTGCTAGTATGAAGTCTCCACCTCTCAAACTTAAGGTGAAATCAGTGGGATCTCGACTTAGTAACAACAACGCAGCAACACCAACAACAACACCGACCAACAAACAGAAGAAACCCCCAGCCCAACAACCAACAACACCCAGCAACACAGACAACAACAACACAGCTTCATGGAAAAAACCGAGGGGCGGCGCGAGACGCGAGCCGGATCTGTCCCGGCCGCCGCCGCTCGCCGCACGGCCCAACCACCACGATGGCTCCACACAATCGGCCCCAGCAGCAGTACAGCCGTGTTCACTGACCTGCGGGCGCGGAGTACCGTCACTGTCGTGCGGCGCGTGTCTCTGCCTGTACCACGCCGCGTGTGTAGGGTACGCCACGCATCTACCGCCTGATCCCTTCTACTGTAAGAACTGCCGCAAGTCGCCGCGCGGCTCCCGCTCGCCGCCGCCGCTGACGCACAAGTCCGCGGCGCCGCGCCGCACGGCGCCGCGCGATCAGCGCGTCATGCTCAGGATGAAGAAATCAGGCGGCACAGCGGACGGTGAGCGCGTGTGGGCTGTATCGAATCAGTTTAGCAGCCAGCCGCCTGCCGCCAGCAGCGCCGCTGTGCACAGTGCGCCAACTGGACACACTGTACACGCTGAGCGCACTGTGCACGCTGAGCGTACTGTGCATGCTGAGCGCACTGTGCACGCTGTGCACGCTGAGCACACTGTGCACGCTGCGCCCGTCGCCCCACGGCGCCGCCGCACGCCGGCGCAGTCACTCGTGGTAATCAACGGACGACGGTTCGTCGTCGTGCTCAGGAACATGATGAACCACCCGCAACATGAAGAGAAACGCCTCCGCGGTCGTGTTGCAAACGGCTTGTCGCCGCCTCCCGCGCTTATGTCGCCGCGACGTCGCGGAAGACAGCGTGACGACACCGACCACTTCACTGCGTTTTACAATAAGGCGCAGGAAAATAATTATAACGTTGTTGTACAGATTTTCCAGTACCTAGGTATGCGGGACTTAGCGCACTGTGCTCGTGTCTGCAAACTATGGCGACAGTTAGCCGCAACGCCGGCTCTCTGGCGACATGTCAGGATGAAAAACTCACATGTAAGCGATTGGGCGGGTCTGTGCGCGTCACTAAAGCGTCATGGTACCAAGCGATTGGACTTACGCAAGATGTTGCTGCCACCAAACGACACAGTCTTCTGGGAACAGTTCGCGCAACATATCTCCACAGTCGACACGCTAGAGAGGATAGAGATGTGCCGCTGCCCGGCGCGCGCGGTGGAGGCGGTGTGCCGCGGGCTGCCCGGGCTGCGCGCGCTGTCCGCGCTCGCCATCCGCGACGCGCTGCTGGACCCGGCGCCGCTGGCCGCGCTGCCGCTGCTGCACGAGCTGCGCCTCAAGAGCATGGCCGGCCTCAGCCTCACGCAGGACCTCAGCCACCTCGCCGCGCTCACCAAGCTGCAGCACCTCTCGCTCACCTCGATCAAGGAGCTGGGCTGGTGCGCGTGCGACGTGATCGGGTCGCTGTCGGCGCTGGAGTCGCTGGAGCTGGGCGAGTGCACCTTCCGCGCGGAGTTCGCGAGCGTGCTGGCGCGCCTGTCCCGGCTGCGGCGCGTGCGCCTCGAGCGCGGCACGCCGCACTGCGCCGCGCCCGACATCCTGCGCGCGCTCGCCACGCTGCCGCTGCTCACGCGCCTCGAGCTAGTCAACATCGACGTCAAGGTGGGTTTCGACGACGCCTTAGCGGCATGTACGAACGTGCGTCGGCTACTAATCATCCCGACATACGTGTCACAGTCCGCAACCACCAACAGACAAGTATTAAGCGGTGTACTGCGTCTACGAGATACACTAACACACCTTATGTGGGGAGTCACCATCGAGCTGCTGCGAGTCACAGAACTCTTCGTAGACCAATGTGAAAGAGCAGGCGAGCCTCGCAGAAGAGATGCCGGTGAGTGTATCCCGGTACTGAAGCCGGTCCCTGGCGCCCAATCAGCTGAACGTGCCGCAGGGCCACCACAAGTGGAAATCCTCCCGCTGCCGACACTACAACGTCTTCTCGCGCATCAGTTGCCTCACACGCGTCTGAAACTCCTGCGCATCCCTTTCCACGCAACTTGGAGACAGTCTCTCGCTGATTTTCAGTAG
- Protein Sequence
- MGFDEIKEEIKAADYCKILERLEAEVTAASKNLVRLKTVMGIPAVPARESKRYRKDTDGSRPSSALSSRSEGDGATDVSTASSPAHRRRATTEMSSPLLRIPLERGWKRELVYRAALDAHSRRNADIYYYTPLGKKLRSTREVAEQLGGTGLTLENFSFFKEPLGVDDPEKEIIRDAKLMSRRVDSPVAATAPPVTVEGKRTPKPKQPKGASPEPVTPASASMKSPPLKLKVKSVGSRLSNNNAATPTTTPTNKQKKPPAQQPTTPSNTDNNNTASWKKPRGGARREPDLSRPPPLAARPNHHDGSTQSAPAAVQPCSLTCGRGVPSLSCGACLCLYHAACVGYATHLPPDPFYCKNCRKSPRGSRSPPPLTHKSAAPRRTAPRDQRVMLRMKKSGGTADGERVWAVSNQFSSQPPAASSAAVHSAPTGHTVHAERTVHAERTVHAERTVHAVHAEHTVHAAPVAPRRRRTPAQSLVVINGRRFVVVLRNMMNHPQHEEKRLRGRVANGLSPPPALMSPRRRGRQRDDTDHFTAFYNKAQENNYNVVVQIFQYLGMRDLAHCARVCKLWRQLAATPALWRHVRMKNSHVSDWAGLCASLKRHGTKRLDLRKMLLPPNDTVFWEQFAQHISTVDTLERIEMCRCPARAVEAVCRGLPGLRALSALAIRDALLDPAPLAALPLLHELRLKSMAGLSLTQDLSHLAALTKLQHLSLTSIKELGWCACDVIGSLSALESLELGECTFRAEFASVLARLSRLRRVRLERGTPHCAAPDILRALATLPLLTRLELVNIDVKVGFDDALAACTNVRRLLIIPTYVSQSATTNRQVLSGVLRLRDTLTHLMWGVTIELLRVTELFVDQCERAGEPRRRDAGECIPVLKPVPGAQSAERAAGPPQVEILPLPTLQRLLAHQLPHTRLKLLRIPFHATWRQSLADFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -