Basic Information

Insect: Megamerina dolium
Gene Symbol: -
Assembly: GCA_963854835.1
Location: OY978526.1:79833617-79840106[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0013 0.12 13.7 2.1 1 23 265 287 265 287 0.98

2 27 1.2e-05 0.0012 20.1 1.3 2 23 294 315 293 315 0.98

3 27 1.2 1.2e+02 4.4 0.6 2 23 362 383 361 383 0.93

4 27 0.014 1.3 10.5 1.7 1 23 461 484 461 484 0.96

5 27 2.2e-05 0.0021 19.3 0.5 2 23 563 584 563 584 0.97

6 27 0.005 0.48 11.9 2.3 1 23 591 613 591 613 0.96

7 27 0.067 6.4 8.3 1.2 2 23 622 643 621 643 0.96

8 27 0.006 0.57 11.6 1.6 1 23 736 759 736 759 0.98

9 27 0.018 1.7 10.1 0.9 1 21 767 787 767 788 0.94

10 27 0.88 85 4.8 2.3 1 19 797 815 797 820 0.89

11 27 5.1e-07 4.9e-05 24.5 0.3 2 23 836 857 835 857 0.97

12 27 9.9e-05 0.0095 17.2 3.1 1 23 864 886 864 886 0.98

13 27 8.4 8e+02 1.7 1.7 13 23 935 945 924 945 0.84

14 27 0.0062 0.59 11.6 4.0 1 23 1029 1052 1029 1052 0.96

15 27 0.1 9.7 7.8 0.3 1 19 1059 1077 1059 1077 0.97

16 27 1.2 1.1e+02 4.4 3.7 1 23 1089 1112 1089 1112 0.96

17 27 0.00013 0.013 16.8 2.3 1 23 1126 1148 1126 1148 0.98

18 27 0.00034 0.032 15.6 4.8 1 23 1155 1177 1155 1177 0.99

19 27 0.039 3.7 9.1 0.0 2 20 1204 1222 1203 1224 0.94

20 27 0.0051 0.49 11.8 2.8 1 23 1276 1299 1276 1299 0.96

21 27 0.0096 0.92 11.0 0.6 1 23 1336 1359 1336 1359 0.97

22 27 6.2e-05 0.006 17.9 2.9 1 23 1403 1426 1403 1426 0.98

23 27 7.8e-06 0.00075 20.7 0.2 1 23 1463 1485 1463 1485 0.96

24 27 9.1e-06 0.00087 20.5 1.2 1 23 1491 1513 1491 1513 0.99

25 27 2.1e-07 2e-05 25.6 1.6 1 23 1519 1541 1519 1541 0.98

26 27 5.7e-07 5.5e-05 24.3 3.3 1 23 1547 1569 1547 1569 0.99

27 27 0.0035 0.34 12.4 0.1 1 22 1575 1596 1575 1599 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0013	0.12	13.7	2.1	1	23	265	287	265	287	0.98
2	27	1.2e-05	0.0012	20.1	1.3	2	23	294	315	293	315	0.98
3	27	1.2	1.2e+02	4.4	0.6	2	23	362	383	361	383	0.93
4	27	0.014	1.3	10.5	1.7	1	23	461	484	461	484	0.96
5	27	2.2e-05	0.0021	19.3	0.5	2	23	563	584	563	584	0.97
6	27	0.005	0.48	11.9	2.3	1	23	591	613	591	613	0.96
7	27	0.067	6.4	8.3	1.2	2	23	622	643	621	643	0.96
8	27	0.006	0.57	11.6	1.6	1	23	736	759	736	759	0.98
9	27	0.018	1.7	10.1	0.9	1	21	767	787	767	788	0.94
10	27	0.88	85	4.8	2.3	1	19	797	815	797	820	0.89
11	27	5.1e-07	4.9e-05	24.5	0.3	2	23	836	857	835	857	0.97
12	27	9.9e-05	0.0095	17.2	3.1	1	23	864	886	864	886	0.98
13	27	8.4	8e+02	1.7	1.7	13	23	935	945	924	945	0.84
14	27	0.0062	0.59	11.6	4.0	1	23	1029	1052	1029	1052	0.96
15	27	0.1	9.7	7.8	0.3	1	19	1059	1077	1059	1077	0.97
16	27	1.2	1.1e+02	4.4	3.7	1	23	1089	1112	1089	1112	0.96
17	27	0.00013	0.013	16.8	2.3	1	23	1126	1148	1126	1148	0.98
18	27	0.00034	0.032	15.6	4.8	1	23	1155	1177	1155	1177	0.99
19	27	0.039	3.7	9.1	0.0	2	20	1204	1222	1203	1224	0.94
20	27	0.0051	0.49	11.8	2.8	1	23	1276	1299	1276	1299	0.96
21	27	0.0096	0.92	11.0	0.6	1	23	1336	1359	1336	1359	0.97
22	27	6.2e-05	0.006	17.9	2.9	1	23	1403	1426	1403	1426	0.98
23	27	7.8e-06	0.00075	20.7	0.2	1	23	1463	1485	1463	1485	0.96
24	27	9.1e-06	0.00087	20.5	1.2	1	23	1491	1513	1491	1513	0.99
25	27	2.1e-07	2e-05	25.6	1.6	1	23	1519	1541	1519	1541	0.98
26	27	5.7e-07	5.5e-05	24.3	3.3	1	23	1547	1569	1547	1569	0.99
27	27	0.0035	0.34	12.4	0.1	1	22	1575	1596	1575	1599	0.90

Sequence Information

Coding Sequence: ATGAGCACTAACGATAGAATGCGTTGCCGTACATGTTTTGAGACATGTCAAAATGTCTTCTCCCTGCAGGAGCAGGCCCTTCCAAACACCACAAAGAAATCATTGGCTGATATAATAATGGAAATCGCAAAAAttgatACAACTGAACATGCTGATGTGCTGCCGAAATATATATGCGTAAAATGTTCACGTTTACTAAAATCTACATATCTATTTGTATTGCATGCGCGACATGTAAACGATCGTCTATTAGCTAGCATTGGAactgttgctgctactgttgcaGCTACAGAAAATGCTGATGCTGGTGAAAAGCAAGTGGATTGTTTGGTGGAAGCACCAATTGATATACCAGATGGCACATTGCAAATTAAGATGGAATCTGTATATGCAGAGGATGAAACAAACTTGACGGATGCCAATGTTGATGGGAATGTTGATGGTCCCTGTGATGGTTATGATTCTACTGCGAAAATGGTACCAGACATAAAAATggaacatttttataataacgATAATGTTGCAGAGCCATCAACCAGTTCAAATATGgTCAATACCAAATTAGCTAAGCTGAAAGATCCCTTTGTAATGATAGAACCAAATTGGCAAATGCACCATGAAGATGATATGGATTTTGCTAATGATAGTGATTACCATCCAACAGATAATAGCTCAGCCGAGGAAAACACAGAAGAGAAAGACACCACAACGAAACGAATTTGTCGTCGCAACAAACGTCGAGGAAGACCACCCACAACGAATAAAAATGTTTCGACTAGGGGTGCGGGTTGTTTCACATGTGATGTTTGTAATAAGACATTTGCATGGAAAAAGGATCTTCATCGTCATGCGAATAGTCACTTTGCAACGCCTCAAAATCAATGTGACTTTTGTGGGCGGCAATTTATACGTAAGGATAAACTTAAAGATCACATGAAAATACATCGAAAACAtcaagaagaacaacaaaaatcatcaaGTAGaagcaatgatgatgataattctGCACCATCATTTGTTGTACGTCATTCTGAATGGAATTTCGGTGAACGTCTCTATACACCAACACCTTTTCAGCGTGTAGAATGTAAATTATGTAGTATTGATTTTCAATCGATACACGAATTACGCGAACATTTTGTGAGTCATAGTGATAGACAAACATTGGAAATATTCCTAAAGGACAATAATCTGATGAAGGAACTATTTCCACATACAGAAAATATCGAAGAAATTCAAACAGCCATATGTGGGGATATCGAACAAAAGCGTTTTACCAAATACTATGCTATTGTGAATGAGTTTGGTTATGAAATGAGCCTCAGTGATTCCGATGCCACGATAGATGCTGAAGCAGCTGAGTCGCAACAGCCAATTGAATATAAATGTGAATTGTGCTATGCAAAATTCGGCCGTAAATATAAGATGTTTAAGCATGTTCGCGCAGACCACGCCAATGATAAATTGCCACACAAATGCAATGTTTGCAAGTTGGAATTTGTTTGTACACAAATATTTGATCAGCATACGCGCACACAATGTCGCAGCAAGGTGAAGAAATATCAATGTGTCAAGTGTCCGGGCAAATTTATGTGGCGAGAAAATCTCGAAGGTCACAAATGTTCGAATCGATTTAATACGTCCGAGTATAGGGCAGCACAATTGTCGCGCACCTCTAATGTGCGACAATGTCCGATCTGCAACAAAACATTTGTGAAGGTGAAAGCTCTACAGCGTCACATGGATCAACATGATGCCGATGGTAGTACACATGAATGTCCAATTTGCCGTCAACGTTTTCTTAAGGACAATTTACGCCAGCACTTGCGAGAAAGACATGAAGTTGAGTTGCAGCGTCGCATAGTATGCTGTCTGTGCGGTGAACGATTTGAAAAGCTCTCAATATTGCGTTCACACCTCCAAAAGCATGCTGATGGCCGTACCGGTATTAAAATGCAAGAagggaaatttttcaaaaagcaCCTTCCAAATGGTTGCTCCGAACGTCTTGCTGTTTCGGTTGCCGCATCCATTGTGGCagactttaaaattgaaaatatgtcaCGCTACTACTTGGCCACTGATGAGAGTGGCAACGAGTTGGACCTATACGATTCTGAAACAGACACGGAGACAAAGACGGCGTCTGACAAAACTGGGCCGGACCCCACCGACAGCACAACTACGTCACAAACACCACCAACGTACAAATGTGAATTATGCGCTCAGGTATTCAATCGACGCAAGCATATTCTTTTGCATCAGAGCACCGCACATGCCGATGTAAAAATTTGGCCACACACCTGCACACAGTGTTACAAACCATTCGTCAGTATGGAACTATTGCAATATCATCTGAATAGAGATTGTCTCAATTTACTCAAGAATTATCAGTGTAAAAAGTGTTCGGCCCGTTTTGTATGGGAAGATAATCTGCAGGTGCATTGCAAACTGAAACACATAGATTCCGAACAGAAAATCAGTCGACAGCTGGCAAATAAACTGCAGTGCGAGGTATGCGATAAGGTATTTGTACGGGCCAAAGACTTGACCCGACATCGACGTATCCATATGCCAGACGATGAGAAATACGACTGCCCGTTTTGTGAACGCAAATTCAATCGCAAAGACAATATGCATTCACACTTGCGCATACATGGTGCGGCCGCATATGAGACCATTTGCAAGAAGGAGCTGGTGCGCAATAAACCGCCCAAAAAGAAGAGTATCGATCAGAATTTGTGCAAGCGCAATGGTTGCAAGCATATACAGTGTATGATTTGTATGTCGAAACATACGAAAATATCCGATTTGCGCACTCATTTGCGCACCCACCAATATATCGTGTCGTTCGCGCAGCGCCACGAATCGATTTCAGATATCTCGATGCTACTTTATCCAGACGAACTGCCAAAGTCGCAGGAAACTCTCATTGAGCATATCATAGCAGATATCGCAGCACAACAATATGATCGCTTCTATTCCATAACAAATGAGGTTGGCTATGAGCTTAGCATAAATAGTACCGAAACGGAAAGTGATTCGGATTGGGAAAATGCCGTCGACTCTAGCTCACGGAAATTGTACACTTGCGATTTGTGCACCAAAACATTTCATCGTAAATATCAAGTGTACGAGCATCAAATGTTGAGCCATGAATGGTTGGAGGCTCCGCATGTCTGTCAGCATTGTCAGGGACGTTTTGTGTCGGCGGAATTGTTACAGGCGCACTGTGCCCAACAGTGTACCAATAAACAGAAACGTTTCGTGTGTCGCAAGTGCTCACATCGATTTATGTGGaaacaaaatctaaagacgCATGAACTTACAATGCATGCGGAAACTGAGGATGGCAAGAAAAAGCCATCGCGGACATACCATTGTCTCGAATGTAATCGTAGTTTTCAAATGCAGAAAGATCTAACACGTCACATGATTGTGCATCAGAGCGATGTGTCTGTGTTCAAATGTCTGTGGTGCCAACGCAAATTTTATCGTCAAGAGAATTTGCATATGCACATAAAACGTCATGGTATCACACCAGAAACTTTGGCTACTGCAGAATGTTGGTTGACCGCTACAAATAGTCCCAACGGTGAGAAAATCATCCAGTGTAAGGTGTGCAATGTGCAATTCATGAATATTGCTGAGTTGCGACGACATCTAATATATGAGACATCATCGTCAACCACCCATCACGCATATAGCTCACAATTAAACTATTCCATTACCAATAAGCTGGGCTTTGAGTTGGAACTTGATGATTCAGAAACGGATGGTGAGAGTGAGGCAGCTGAGGATGGTGGTGTCAACACAAAGCCATCATATTATTGTGAAACTTGTAAACTGGTATGTAAGCGAAAGTATGAAATGGCACAACATCAGCGTGCAATGCATAAGCCAGAACAGCTGCCATTAAAATGTGAGCGGTGCATTTTTAAAACTGTTTCCAAGGAAATTCTAACGCACCATATGCGTACGCAATGCTTTAATAcggaaaaacaatttcaatgtgACGAATGTAGTATAAAATTTATGTGGCAGGATAATCTTAATAATCACAAACGTTTACTGCATAGcaatggtggcggtggtggtgctgcagctgctactgctgttggtGTACCAATACCTAAAGCTCCTAACCCTGAACTGTTGAAACCTTTATTCACGACCTGTGTTCAACAATCACGTGGTAAAAAGATATTCCAATGTGATAAATGCAAccgtaaatataatcataaagaAAGTCTGGCAGCacacattaaaaaaatgcaCATAGAGCCACCGAATGTGCCACCGAACGAGCAATGCAATGACGGTTATTTGGATGCAGCTACTGGGGAGAAATCGGTAGCTAAACCAAAGTCTACAGTAGATAAAAAATTCCTTTGTCCATTCTGCGGTCGGGCCATATCCTCGTCATCCAATCTGATCATTCATATGCGGCGTCACACTGGCGAGAAACCATTCAAATGTGATTTTTGCGATATGGCTTTTCCACGTTCGTCTGATATGCAGAGTCATCGTCGAACACATACCGGTGAGAAGCCGCATAAATGTACTGTTTGCGATAAGGCATTTGCGCGTTCGTATAAATTACAGGCCCATATGCGTATACATTCGGGTGAGCGGCCCTACAAATGCACTTATTGTGAGAAGAGTTTTACAAAATCTAATGATTTAACATTGCACATGCGACGACACACCGGAGAACGCCCATATGTTTGCGGTATATGTGGAGAGCGTTTCATACAAGGAACTGCCCTTAAAATCCATCGTACAATGCGTGGACATTATGAAGATATTGGACCTAAACGAACGATTCTGGAGCAGTTTTAG
Protein Sequence: MSTNDRMRCRTCFETCQNVFSLQEQALPNTTKKSLADIIMEIAKIDTTEHADVLPKYICVKCSRLLKSTYLFVLHARHVNDRLLASIGTVAATVAATENADAGEKQVDCLVEAPIDIPDGTLQIKMESVYAEDETNLTDANVDGNVDGPCDGYDSTAKMVPDIKMEHFYNNDNVAEPSTSSNMVNTKLAKLKDPFVMIEPNWQMHHEDDMDFANDSDYHPTDNSSAEENTEEKDTTTKRICRRNKRRGRPPTTNKNVSTRGAGCFTCDVCNKTFAWKKDLHRHANSHFATPQNQCDFCGRQFIRKDKLKDHMKIHRKHQEEQQKSSSRSNDDDNSAPSFVVRHSEWNFGERLYTPTPFQRVECKLCSIDFQSIHELREHFVSHSDRQTLEIFLKDNNLMKELFPHTENIEEIQTAICGDIEQKRFTKYYAIVNEFGYEMSLSDSDATIDAEAAESQQPIEYKCELCYAKFGRKYKMFKHVRADHANDKLPHKCNVCKLEFVCTQIFDQHTRTQCRSKVKKYQCVKCPGKFMWRENLEGHKCSNRFNTSEYRAAQLSRTSNVRQCPICNKTFVKVKALQRHMDQHDADGSTHECPICRQRFLKDNLRQHLRERHEVELQRRIVCCLCGERFEKLSILRSHLQKHADGRTGIKMQEGKFFKKHLPNGCSERLAVSVAASIVADFKIENMSRYYLATDESGNELDLYDSETDTETKTASDKTGPDPTDSTTTSQTPPTYKCELCAQVFNRRKHILLHQSTAHADVKIWPHTCTQCYKPFVSMELLQYHLNRDCLNLLKNYQCKKCSARFVWEDNLQVHCKLKHIDSEQKISRQLANKLQCEVCDKVFVRAKDLTRHRRIHMPDDEKYDCPFCERKFNRKDNMHSHLRIHGAAAYETICKKELVRNKPPKKKSIDQNLCKRNGCKHIQCMICMSKHTKISDLRTHLRTHQYIVSFAQRHESISDISMLLYPDELPKSQETLIEHIIADIAAQQYDRFYSITNEVGYELSINSTETESDSDWENAVDSSSRKLYTCDLCTKTFHRKYQVYEHQMLSHEWLEAPHVCQHCQGRFVSAELLQAHCAQQCTNKQKRFVCRKCSHRFMWKQNLKTHELTMHAETEDGKKKPSRTYHCLECNRSFQMQKDLTRHMIVHQSDVSVFKCLWCQRKFYRQENLHMHIKRHGITPETLATAECWLTATNSPNGEKIIQCKVCNVQFMNIAELRRHLIYETSSSTTHHAYSSQLNYSITNKLGFELELDDSETDGESEAAEDGGVNTKPSYYCETCKLVCKRKYEMAQHQRAMHKPEQLPLKCERCIFKTVSKEILTHHMRTQCFNTEKQFQCDECSIKFMWQDNLNNHKRLLHSNGGGGGAAAATAVGVPIPKAPNPELLKPLFTTCVQQSRGKKIFQCDKCNRKYNHKESLAAHIKKMHIEPPNVPPNEQCNDGYLDAATGEKSVAKPKSTVDKKFLCPFCGRAISSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDMQSHRRTHTGEKPHKCTVCDKAFARSYKLQAHMRIHSGERPYKCTYCEKSFTKSNDLTLHMRRHTGERPYVCGICGERFIQGTALKIHRTMRGHYEDIGPKRTILEQF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00967389;
90% Identity: -
80% Identity: -